| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118427
Identifier: 197118427
GI number: 197118427
Start: 2353151
End: 2353954
Strand: Direct
Name: 197118427
Synonym: Gbem_2045
Alternate gene names: NA
Gene position: 2353151-2353954 (Clockwise)
Preceding gene: 197118425
Following gene: 197118431
Centisome position: 50.99
GC content: 58.33
Gene sequence:
>804_bases ATGCAGGCACAACGCTACCTCATGGAACACGGCGACGAGTCTCTCAGGCTCGATATCAAGACGGACAACGAAGTGACCGC CAGGCAGGCTACCTGGGCCGGCATAGCCCCGGGCATGCGCGTGGCGGATATAGGGTGCGGTTCGGGAAAGACCACTTCCA AGCTGGGGGAGTTGGTGCAACCGGGCGGGAGCGCACTCGGCATCGACATCGCAGAGCAGAGGGTCGCTTTCGGCCGGGAG AACTACCAGAACGATTCCGTCAGTTTCCTGCACCGCGACGCCCGCCCCCCCATGAAGGATCTGGGCCTCTTCGACTTTGT CTGGGTTCGTTTTCTGCTTGAGTACCATAGGGCGAACAGCTACGACCTGGTGAAGAACATCTCGGATATCGTGGAGCCGG GAGGGACGCTGGTTCTGATCGACCTCGACTACAACTGCCTGACCCATTTCGGCCACTCGGACCGGATGGATAAGGCGCTG GCGGCCATCATGAAGAGCCTGGAGGTAAAGGCGAATTTCGACCCCTACGTGGGGAGGAAGCTTTATTCCTACCTCTACGA CTTGGGCTACAAGGATATCAGCGTGGATGTTGGCGCCCACCATCAGATCTTCGGTGAGCTAAGGCATGCGGACGACTTCA ATTGGACCAAGAAGGTGGAGGTTGGTGCGAGATTTTCCGGCTACGACTTTGCCGAATATGAAAACGGGTTCGAGGAGTTC CTGGCCGAGTTCAGGACCTTCTTCGCGCATCCGCGCAGGTTCACCTATACTCCCATCATCGCGGTGAGGGGACGGAAGCC CTAA
Upstream 100 bases:
>100_bases GCGGCGAACTAGTAACATGGCTCCTGCCGTGGTTGCCTAACTGCGGCTTTTGTGCTAATAGTCAGGCTTTCTAAAATGCA AAAACGGAGTAATTTCAATT
Downstream 100 bases:
>100_bases CCCCTAACCCCATGTTCTAGCCCCCAGCCCCCAGCAGGTGGGGTCATGCCGGAAAGGGTTGAATCGCGCGGACCTCGCCT TCCTCGTCTGCCCCGCGCTT
Product: type 11 SAM-dependent methyltransferase
Products: NA
Alternate protein names: 2-Heptaprenyl-1 4-Naphthoquinone Methyltransferase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MQAQRYLMEHGDESLRLDIKTDNEVTARQATWAGIAPGMRVADIGCGSGKTTSKLGELVQPGGSALGIDIAEQRVAFGRE NYQNDSVSFLHRDARPPMKDLGLFDFVWVRFLLEYHRANSYDLVKNISDIVEPGGTLVLIDLDYNCLTHFGHSDRMDKAL AAIMKSLEVKANFDPYVGRKLYSYLYDLGYKDISVDVGAHHQIFGELRHADDFNWTKKVEVGARFSGYDFAEYENGFEEF LAEFRTFFAHPRRFTYTPIIAVRGRKP
Sequences:
>Translated_267_residues MQAQRYLMEHGDESLRLDIKTDNEVTARQATWAGIAPGMRVADIGCGSGKTTSKLGELVQPGGSALGIDIAEQRVAFGRE NYQNDSVSFLHRDARPPMKDLGLFDFVWVRFLLEYHRANSYDLVKNISDIVEPGGTLVLIDLDYNCLTHFGHSDRMDKAL AAIMKSLEVKANFDPYVGRKLYSYLYDLGYKDISVDVGAHHQIFGELRHADDFNWTKKVEVGARFSGYDFAEYENGFEEF LAEFRTFFAHPRRFTYTPIIAVRGRKP >Mature_267_residues MQAQRYLMEHGDESLRLDIKTDNEVTARQATWAGIAPGMRVADIGCGSGKTTSKLGELVQPGGSALGIDIAEQRVAFGRE NYQNDSVSFLHRDARPPMKDLGLFDFVWVRFLLEYHRANSYDLVKNISDIVEPGGTLVLIDLDYNCLTHFGHSDRMDKAL AAIMKSLEVKANFDPYVGRKLYSYLYDLGYKDISVDVGAHHQIFGELRHADDFNWTKKVEVGARFSGYDFAEYENGFEEF LAEFRTFFAHPRRFTYTPIIAVRGRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30337; Mature: 30337
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQRYLMEHGDESLRLDIKTDNEVTARQATWAGIAPGMRVADIGCGSGKTTSKLGELVQ CCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHC PGGSALGIDIAEQRVAFGRENYQNDSVSFLHRDARPPMKDLGLFDFVWVRFLLEYHRANS CCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCC YDLVKNISDIVEPGGTLVLIDLDYNCLTHFGHSDRMDKALAAIMKSLEVKANFDPYVGRK HHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LYSYLYDLGYKDISVDVGAHHQIFGELRHADDFNWTKKVEVGARFSGYDFAEYENGFEEF HHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCHHHHH LAEFRTFFAHPRRFTYTPIIAVRGRKP HHHHHHHHCCCCCEEECEEEEECCCCC >Mature Secondary Structure MQAQRYLMEHGDESLRLDIKTDNEVTARQATWAGIAPGMRVADIGCGSGKTTSKLGELVQ CCHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHC PGGSALGIDIAEQRVAFGRENYQNDSVSFLHRDARPPMKDLGLFDFVWVRFLLEYHRANS CCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCC YDLVKNISDIVEPGGTLVLIDLDYNCLTHFGHSDRMDKALAAIMKSLEVKANFDPYVGRK HHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHH LYSYLYDLGYKDISVDVGAHHQIFGELRHADDFNWTKKVEVGARFSGYDFAEYENGFEEF HHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCHHHHH LAEFRTFFAHPRRFTYTPIIAVRGRKP HHHHHHHHCCCCCEEECEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA