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The map label for this gene is bphB [H]

Identifier: 197118431

GI number: 197118431

Start: 2360841

End: 2362976

Strand: Direct

Name: bphB [H]

Synonym: Gbem_2049

Alternate gene names: 197118431

Gene position: 2360841-2362976 (Clockwise)

Preceding gene: 197118427

Following gene: 197118439

Centisome position: 51.15

GC content: 61.0

Gene sequence:

>2136_bases
ATGGCTTTTGGGCCCGACACGCCACTGTATAACAGCCGCATCATAGGCTTGTTCGTGAAGCTGCTGAGGGAAAAGTATCC
CCAGGTAGATATCGGCGAGCTTTTGAACCATGCCCGCATGAAAAGGTGGGAGGTGGCGGATCCCGGGCACTGGTTCAGTC
AGCGGCAGATCGACCTCTTCACCGACAAGCTGATCCTCATGACCGGCGACCCCCGCATTGCCCGGGAAGCCGGGAGGTAT
GCCGCCTCGCCTGAGGGGCTGGGCTCTTTGCACGCCTTCGTTCTTGGGCTGGTAGGCCCGGAATACCTCTTCTTCGTCAT
GCATAAGCTGGCGCGCAAGTTCACCCGTTCCTCGCGCAGTTCCTCCCGCAGGATCGGCCCGCGTGAGATCGAGGTTACTG
TCGCTTTCGAGCCGGGGGTGGTCGAGAATCCCTCTCAGTGCGACAACCGCATCGGCTACTTCGAGGCCGCCTTCCTGCTC
TTTGGTTACGATTTTCCCCGCATACGCCATACCGAGTGCATCTTCAAGGGGGGAGAGGTCTGCCGCTACAACATCTCGTG
GAACCCGTCGCTCGTCTCGCGCCTGATCGTCGCCCGCCGTATTTCGTTGCTGCTTCTGCCGCTAAGCTCGCTCTCCCTTT
TCTTTGGTGCCGGCCACTTCTTCACCCCTGCGCTTACCCTGGCGCTCTTCGTTTATCTCCTTTTCACCCTGCTGCTGCAC
GGCCAGGAGCGCAAGGCGCTTCTCTCGTCGCTGACCAGCATGCGCAACTCCACCGAAAAGCTGCTGACCCAGACGCAGGA
CAACTGCGACAACGCCCAGATGATCAACGAGATCGGAGAGGTGCTCTCCACGAGGACCGATCTCGACGACATCCTGAAGA
GCGTGAACCAGGTGCTGCTGAAAAGGCTCGATTACGGCCGGGGCATCATCTTCCTACTCGACCGGGACCGGGAAGCCCTG
GTGCTGAAGGGGTGTTTCGGGTTCAGCGAGGAGCACCAGCTAAAGCTTGCCCAGATGGTGCTCCCGGTTGCCAGCAGCGA
GCCCCACGGCGTCCTGGTCCGCTGCTTCCTCCGGCAGGAGCCGCTGTTGGTGAACGACCTTTCCGAGGTGAAGGCGCGGG
CAAGTGCCGAAAACTACGCCTTCTTCGTGGGGCTTGGGGTGAAATCCTTCATCTGCGCCCCCATTGTCTGCGAGGGGGAG
TCGCTGGGGGTCTTCGCGGTAGACGACATGAAACGGGGAGGCGAGCTTTTGCAAAGCGACCTGAACCTGATCCAGGGGGT
GGCGCCGGTGATCGGCATCGCCATCAGGAACGCGATGCACCTGGCCAACGAAAGGCGTCTTTCAGAGCAGCTGAGGAAGG
CGTCAGAGCTGCTGGAGCGCAGGGTTGACGAGCGAACCTCGGAGCTCTCCCACGCGAACCAGGAACTGGAGTTTCTCTAC
GATTCGGTGTCGCACGACCTGCGCACGCCGATAAGGGTGATCTACGGCTACGGAGAGCTGCTGCTGGAAAGTTACGGTCC
GCAGTTGGACGACAACGCCAAAGAGTACCTGAACTGCATAATAAGCGGCGGGGAACGGATGGAGGCGACCCTGGACCGGA
TGCTGGATCTCTCCGAGATACGCCAGGCCCAACTCGACCTGAAGCCGGTGGATCTGAGCCGGATCGCCCACGGGATCATG
GCGGACCTGAGGATAGTCGATTATAAACGGGACTTGACGGTGGAGATCCAGGAGGGCGTGGTGGTGACCGGCGACGAGAA
GCTTTTGACCCGCGTCATGGAGAACCTTTTGGGGAACGCCTGGAAATATACGGCCGGCAAGGTTGAAAGTGCCATCTCCT
TCGGCGTGCGGGATGGGGTCTGCTACGTTGCGGACAACGGGGAAGGCTTCGACATGTCGCAGGCCGAACGGCTGTTCCTG
CCCTTCCAGAGGCTGCATGGCGACAGCGATATCTCCGGTCATGGCTTCGGGCTTTCCATCGTGCGCAAGATGATCGAGCG
CATGGGGGGGCAGGTGTGGGGGGAGGGGAAGCCCGGCGAAGGCGCGACCTTCTACTTCACCCTCCCTGGTGCCGCCAAGG
CCATGGTTTTACCTTCGCAGGCTCCCGCCGATGCCGGCGAGTTCGCCGTCGATTGA

Upstream 100 bases:

>100_bases
AACTGCGAAGTTCTATGAGAGTGTTTCAACGATGGATTATTAAATTGATTATCCTCTTATTCATGGGTAAACTTTCGCCA
TTTCGGTTGAAGGGATTGAA

Downstream 100 bases:

>100_bases
TGCCTCACCGCCCCTTTCAACCTACCTCCGCGTACTCCCTCTCGCGGTAATCCACTCCCAGCGACAGCGCCAGTTCCCGC
ACCTTTCCGACATCCAGTCC

Product: GAF domain-containing sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 710

Protein sequence:

>711_residues
MAFGPDTPLYNSRIIGLFVKLLREKYPQVDIGELLNHARMKRWEVADPGHWFSQRQIDLFTDKLILMTGDPRIAREAGRY
AASPEGLGSLHAFVLGLVGPEYLFFVMHKLARKFTRSSRSSSRRIGPREIEVTVAFEPGVVENPSQCDNRIGYFEAAFLL
FGYDFPRIRHTECIFKGGEVCRYNISWNPSLVSRLIVARRISLLLLPLSSLSLFFGAGHFFTPALTLALFVYLLFTLLLH
GQERKALLSSLTSMRNSTEKLLTQTQDNCDNAQMINEIGEVLSTRTDLDDILKSVNQVLLKRLDYGRGIIFLLDRDREAL
VLKGCFGFSEEHQLKLAQMVLPVASSEPHGVLVRCFLRQEPLLVNDLSEVKARASAENYAFFVGLGVKSFICAPIVCEGE
SLGVFAVDDMKRGGELLQSDLNLIQGVAPVIGIAIRNAMHLANERRLSEQLRKASELLERRVDERTSELSHANQELEFLY
DSVSHDLRTPIRVIYGYGELLLESYGPQLDDNAKEYLNCIISGGERMEATLDRMLDLSEIRQAQLDLKPVDLSRIAHGIM
ADLRIVDYKRDLTVEIQEGVVVTGDEKLLTRVMENLLGNAWKYTAGKVESAISFGVRDGVCYVADNGEGFDMSQAERLFL
PFQRLHGDSDISGHGFGLSIVRKMIERMGGQVWGEGKPGEGATFYFTLPGAAKAMVLPSQAPADAGEFAVD

Sequences:

>Translated_711_residues
MAFGPDTPLYNSRIIGLFVKLLREKYPQVDIGELLNHARMKRWEVADPGHWFSQRQIDLFTDKLILMTGDPRIAREAGRY
AASPEGLGSLHAFVLGLVGPEYLFFVMHKLARKFTRSSRSSSRRIGPREIEVTVAFEPGVVENPSQCDNRIGYFEAAFLL
FGYDFPRIRHTECIFKGGEVCRYNISWNPSLVSRLIVARRISLLLLPLSSLSLFFGAGHFFTPALTLALFVYLLFTLLLH
GQERKALLSSLTSMRNSTEKLLTQTQDNCDNAQMINEIGEVLSTRTDLDDILKSVNQVLLKRLDYGRGIIFLLDRDREAL
VLKGCFGFSEEHQLKLAQMVLPVASSEPHGVLVRCFLRQEPLLVNDLSEVKARASAENYAFFVGLGVKSFICAPIVCEGE
SLGVFAVDDMKRGGELLQSDLNLIQGVAPVIGIAIRNAMHLANERRLSEQLRKASELLERRVDERTSELSHANQELEFLY
DSVSHDLRTPIRVIYGYGELLLESYGPQLDDNAKEYLNCIISGGERMEATLDRMLDLSEIRQAQLDLKPVDLSRIAHGIM
ADLRIVDYKRDLTVEIQEGVVVTGDEKLLTRVMENLLGNAWKYTAGKVESAISFGVRDGVCYVADNGEGFDMSQAERLFL
PFQRLHGDSDISGHGFGLSIVRKMIERMGGQVWGEGKPGEGATFYFTLPGAAKAMVLPSQAPADAGEFAVD
>Mature_710_residues
AFGPDTPLYNSRIIGLFVKLLREKYPQVDIGELLNHARMKRWEVADPGHWFSQRQIDLFTDKLILMTGDPRIAREAGRYA
ASPEGLGSLHAFVLGLVGPEYLFFVMHKLARKFTRSSRSSSRRIGPREIEVTVAFEPGVVENPSQCDNRIGYFEAAFLLF
GYDFPRIRHTECIFKGGEVCRYNISWNPSLVSRLIVARRISLLLLPLSSLSLFFGAGHFFTPALTLALFVYLLFTLLLHG
QERKALLSSLTSMRNSTEKLLTQTQDNCDNAQMINEIGEVLSTRTDLDDILKSVNQVLLKRLDYGRGIIFLLDRDREALV
LKGCFGFSEEHQLKLAQMVLPVASSEPHGVLVRCFLRQEPLLVNDLSEVKARASAENYAFFVGLGVKSFICAPIVCEGES
LGVFAVDDMKRGGELLQSDLNLIQGVAPVIGIAIRNAMHLANERRLSEQLRKASELLERRVDERTSELSHANQELEFLYD
SVSHDLRTPIRVIYGYGELLLESYGPQLDDNAKEYLNCIISGGERMEATLDRMLDLSEIRQAQLDLKPVDLSRIAHGIMA
DLRIVDYKRDLTVEIQEGVVVTGDEKLLTRVMENLLGNAWKYTAGKVESAISFGVRDGVCYVADNGEGFDMSQAERLFLP
FQRLHGDSDISGHGFGLSIVRKMIERMGGQVWGEGKPGEGATFYFTLPGAAKAMVLPSQAPADAGEFAVD

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=226, Percent_Identity=29.646017699115, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788713, Length=236, Percent_Identity=26.271186440678, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=24.6861924686192, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1787894, Length=222, Percent_Identity=31.5315315315315, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=28.4403669724771, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87081816, Length=273, Percent_Identity=27.1062271062271, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1788549, Length=244, Percent_Identity=25.4098360655738, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI87082128, Length=242, Percent_Identity=26.8595041322314, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788393, Length=234, Percent_Identity=26.4957264957265, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 79456; Mature: 79324

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGPDTPLYNSRIIGLFVKLLREKYPQVDIGELLNHARMKRWEVADPGHWFSQRQIDLF
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
TDKLILMTGDPRIAREAGRYAASPEGLGSLHAFVLGLVGPEYLFFVMHKLARKFTRSSRS
ECEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
SSRRIGPREIEVTVAFEPGVVENPSQCDNRIGYFEAAFLLFGYDFPRIRHTECIFKGGEV
HHCCCCCEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCE
CRYNISWNPSLVSRLIVARRISLLLLPLSSLSLFFGAGHFFTPALTLALFVYLLFTLLLH
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GQERKALLSSLTSMRNSTEKLLTQTQDNCDNAQMINEIGEVLSTRTDLDDILKSVNQVLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KRLDYGRGIIFLLDRDREALVLKGCFGFSEEHQLKLAQMVLPVASSEPHGVLVRCFLRQE
HHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PLLVNDLSEVKARASAENYAFFVGLGVKSFICAPIVCEGESLGVFAVDDMKRGGELLQSD
CCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEECCCCCCEEEECCHHHHHHHHHHH
LNLIQGVAPVIGIAIRNAMHLANERRLSEQLRKASELLERRVDERTSELSHANQELEFLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSVSHDLRTPIRVIYGYGELLLESYGPQLDDNAKEYLNCIISGGERMEATLDRMLDLSEI
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHH
RQAQLDLKPVDLSRIAHGIMADLRIVDYKRDLTVEIQEGVVVTGDEKLLTRVMENLLGNA
HHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEECCEEEECCHHHHHHHHHHHHCCC
WKYTAGKVESAISFGVRDGVCYVADNGEGFDMSQAERLFLPFQRLHGDSDISGHGFGLSI
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VRKMIERMGGQVWGEGKPGEGATFYFTLPGAAKAMVLPSQAPADAGEFAVD
HHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFGPDTPLYNSRIIGLFVKLLREKYPQVDIGELLNHARMKRWEVADPGHWFSQRQIDLF
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
TDKLILMTGDPRIAREAGRYAASPEGLGSLHAFVLGLVGPEYLFFVMHKLARKFTRSSRS
ECEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
SSRRIGPREIEVTVAFEPGVVENPSQCDNRIGYFEAAFLLFGYDFPRIRHTECIFKGGEV
HHCCCCCEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCE
CRYNISWNPSLVSRLIVARRISLLLLPLSSLSLFFGAGHFFTPALTLALFVYLLFTLLLH
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
GQERKALLSSLTSMRNSTEKLLTQTQDNCDNAQMINEIGEVLSTRTDLDDILKSVNQVLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KRLDYGRGIIFLLDRDREALVLKGCFGFSEEHQLKLAQMVLPVASSEPHGVLVRCFLRQE
HHHCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
PLLVNDLSEVKARASAENYAFFVGLGVKSFICAPIVCEGESLGVFAVDDMKRGGELLQSD
CCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEECCCCCCEEEECCHHHHHHHHHHH
LNLIQGVAPVIGIAIRNAMHLANERRLSEQLRKASELLERRVDERTSELSHANQELEFLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSVSHDLRTPIRVIYGYGELLLESYGPQLDDNAKEYLNCIISGGERMEATLDRMLDLSEI
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCHHHH
RQAQLDLKPVDLSRIAHGIMADLRIVDYKRDLTVEIQEGVVVTGDEKLLTRVMENLLGNA
HHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEECCEEEECCHHHHHHHHHHHHCCC
WKYTAGKVESAISFGVRDGVCYVADNGEGFDMSQAERLFLPFQRLHGDSDISGHGFGLSI
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VRKMIERMGGQVWGEGKPGEGATFYFTLPGAAKAMVLPSQAPADAGEFAVD
HHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]