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The map label for this gene is cheW-12 [H]

Identifier: 197118413

GI number: 197118413

Start: 2340862

End: 2341323

Strand: Reverse

Name: cheW-12 [H]

Synonym: Gbem_2031

Alternate gene names: 197118413

Gene position: 2341323-2340862 (Counterclockwise)

Preceding gene: 197118415

Following gene: 197118412

Centisome position: 50.73

GC content: 61.47

Gene sequence:

>462_bases
ATGGAGGGAGCGATCGTTTCAACTCACCTACTTATCTTTGCCTTAGAAGGGCAACGCTACGCACTGCCAGTGTCCGCTGT
GGTCAGGGTAGTACGCGCTGCGGCCCTCACTCCCCTGCCCAAGGCCCCGGAAATCGTACTGGGGATATTGGACCTCCAGG
GGGAGATCATTCCCGTCATCAACCTCAGGAAACGCTTTCGCCTGCCGGAGCGCCCCATCGGCTGCGACGATCAGTTCCTT
GTCGTCCGCACTTCGAACTTCCCGGTGGCGCTGGCCGTGGACAACACCCAGGAGGTAGTGCAACTCGACCCGGATGCCGT
GGTGGAGCCTGAAGACATCGTGCGAGGGACCGACTACCTCTCCGGAGTGACGAGGAACGAGGGTGGGCTGGTGCTGATCC
ACGACCTCGACACCCTGCTCTTCCCCGACGAGGAGCAGCAGATCGCAAAGGCCCTGACGTGA

Upstream 100 bases:

>100_bases
AGCAAAAAAAACCGTGAATATAGGCCAGTGGCGCATTTATCAGCTTGAACAGGGCGCATTGTCGAGGTAAATTAATGGGC
GGCGTCACGTTGCGGTTTTA

Downstream 100 bases:

>100_bases
GCGCGCACAGCAACGAGGCAATGCATAAGTTCGCCCACATGGTGACGACAAAGCTGGGGCTCCACTTTCCGCCCGAGCGT
CTGGCTGAGTTGGCCCGGAA

Product: chemotaxis protein CheW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEGAIVSTHLLIFALEGQRYALPVSAVVRVVRAAALTPLPKAPEIVLGILDLQGEIIPVINLRKRFRLPERPIGCDDQFL
VVRTSNFPVALAVDNTQEVVQLDPDAVVEPEDIVRGTDYLSGVTRNEGGLVLIHDLDTLLFPDEEQQIAKALT

Sequences:

>Translated_153_residues
MEGAIVSTHLLIFALEGQRYALPVSAVVRVVRAAALTPLPKAPEIVLGILDLQGEIIPVINLRKRFRLPERPIGCDDQFL
VVRTSNFPVALAVDNTQEVVQLDPDAVVEPEDIVRGTDYLSGVTRNEGGLVLIHDLDTLLFPDEEQQIAKALT
>Mature_153_residues
MEGAIVSTHLLIFALEGQRYALPVSAVVRVVRAAALTPLPKAPEIVLGILDLQGEIIPVINLRKRFRLPERPIGCDDQFL
VVRTSNFPVALAVDNTQEVVQLDPDAVVEPEDIVRGTDYLSGVTRNEGGLVLIHDLDTLLFPDEEQQIAKALT

Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cheW-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002545 [H]

Pfam domain/function: PF01584 CheW [H]

EC number: NA

Molecular weight: Translated: 16743; Mature: 16743

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGAIVSTHLLIFALEGQRYALPVSAVVRVVRAAALTPLPKAPEIVLGILDLQGEIIPVI
CCCCEEEEEEEEEEECCCEEEECHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEEE
NLRKRFRLPERPIGCDDQFLVVRTSNFPVALAVDNTQEVVQLDPDAVVEPEDIVRGTDYL
ECHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCHHH
SGVTRNEGGLVLIHDLDTLLFPDEEQQIAKALT
CCCEECCCCEEEEEECCEEECCCHHHHHHHHCC
>Mature Secondary Structure
MEGAIVSTHLLIFALEGQRYALPVSAVVRVVRAAALTPLPKAPEIVLGILDLQGEIIPVI
CCCCEEEEEEEEEEECCCEEEECHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEEE
NLRKRFRLPERPIGCDDQFLVVRTSNFPVALAVDNTQEVVQLDPDAVVEPEDIVRGTDYL
ECHHHCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCHHH
SGVTRNEGGLVLIHDLDTLLFPDEEQQIAKALT
CCCEECCCCEEEEEECCEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]