Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118383

Identifier: 197118383

GI number: 197118383

Start: 2306154

End: 2306744

Strand: Direct

Name: 197118383

Synonym: Gbem_2001

Alternate gene names: NA

Gene position: 2306154-2306744 (Clockwise)

Preceding gene: 197118382

Following gene: 197118384

Centisome position: 49.97

GC content: 66.16

Gene sequence:

>591_bases
ATGCGCAAGCCAGCCCTATGCCTGATTTCGCTCGCCCTGGTAATGTCCGTTACCGCCTGCAGCAGATCGCCACGCTCAAG
CTTCTATACCCTGGTTCCCCAGGCCGCTCCGCCGCCGGCGCTCTCTCCCGCTGCGCCGTCGGTTTCCGTAGGTCCGGTGA
CTATCCCCGAGCTTGTGGACCGCCCCCAGATCGTCGTGCGCGTCGCCGAGAACCGGGTCGAAGTCCTGGAGAGCCACCGC
TGGGCGGAACCTTTGAAGAGCGAGATACCGCGCCTGATGGCGCAGGATTTGGGCCGCATGCTCGGCTCCTCCCGCGTTTC
CAGCTACGGCCAGAGTGCCGGTGCCGACGCGACCTATCGCGTGCTGGTCGACATCGTCAGGCTTGAGGCTGTTCCGGGTG
ATGCGGCGACCGTCCAGGCGCTTTGGACCGTGCGCCGCGGCAACGCCAGGATCAAAGGAGAGTCGCTGGTGAGGGAGAAG
GTCTCCGCCCCCGGCTACGATCAACTGATCTCCGCCTGCAGCCGGGCCCTCGGCGGAGTGAGCTCGGACATAGCCAAGGC
CATCCGTGCCGATGCCGCGGCACTTCCTTGA

Upstream 100 bases:

>100_bases
GCGAGGTGTCCCGCGCCGCCCAGTCGCTCAGGGTTCTGGGCGACTACCTGGAACAGCACCCCGAGGCCCTGATCCGCGGC
AAGAAACAGGAGAAATAGCC

Downstream 100 bases:

>100_bases
TTGGGAACTCTCCCCGTGGCACCTGCCCCCACCCCCTAACCCCCTCCCGCGAGGGGAGGGGGGACCGAACGATGGTACAA
TTGGGCTTTGAGCCCCATCA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRKPALCLISLALVMSVTACSRSPRSSFYTLVPQAAPPPALSPAAPSVSVGPVTIPELVDRPQIVVRVAENRVEVLESHR
WAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADATYRVLVDIVRLEAVPGDAATVQALWTVRRGNARIKGESLVREK
VSAPGYDQLISACSRALGGVSSDIAKAIRADAAALP

Sequences:

>Translated_196_residues
MRKPALCLISLALVMSVTACSRSPRSSFYTLVPQAAPPPALSPAAPSVSVGPVTIPELVDRPQIVVRVAENRVEVLESHR
WAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADATYRVLVDIVRLEAVPGDAATVQALWTVRRGNARIKGESLVREK
VSAPGYDQLISACSRALGGVSSDIAKAIRADAAALP
>Mature_196_residues
MRKPALCLISLALVMSVTACSRSPRSSFYTLVPQAAPPPALSPAAPSVSVGPVTIPELVDRPQIVVRVAENRVEVLESHR
WAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADATYRVLVDIVRLEAVPGDAATVQALWTVRRGNARIKGESLVREK
VSAPGYDQLISACSRALGGVSSDIAKAIRADAAALP

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20737; Mature: 20737

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPALCLISLALVMSVTACSRSPRSSFYTLVPQAAPPPALSPAAPSVSVGPVTIPELVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHC
RPQIVVRVAENRVEVLESHRWAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADATYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VLVDIVRLEAVPGDAATVQALWTVRRGNARIKGESLVREKVSAPGYDQLISACSRALGGV
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
SSDIAKAIRADAAALP
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKPALCLISLALVMSVTACSRSPRSSFYTLVPQAAPPPALSPAAPSVSVGPVTIPELVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHC
RPQIVVRVAENRVEVLESHRWAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADATYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VLVDIVRLEAVPGDAATVQALWTVRRGNARIKGESLVREKVSAPGYDQLISACSRALGGV
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
SSDIAKAIRADAAALP
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA