Click here to switch to the map view.

The map label for this gene is asrB [H]

Identifier: 197118353

GI number: 197118353

Start: 2275037

End: 2275888

Strand: Reverse

Name: asrB [H]

Synonym: Gbem_1970

Alternate gene names: 197118353

Gene position: 2275888-2275037 (Counterclockwise)

Preceding gene: 197118354

Following gene: 197118352

Centisome position: 49.31

GC content: 68.19

Gene sequence:

>852_bases
ATGACCCTCCTGGCAAACCATCCGGACACCCCCTTCGCGGCCAAGCTTTTGCAGCGGCGCCAGCTCTCTGAGGACACTGC
GCTCTTCACCCTGGCGCCCGAAGCCGCAGCGCTTCCCTCCCTTTCCAGATTCATCCCCGGGCAGTTCGTCCAGCTCTCGG
TTCCCGGCGCGGGCGAAATTCCCATCTCGCCCGCCGATCTCGCCCACGAAGACGGCACCGTGGATCTCTGCGTGCGCCGG
GTGGGGCACGTGACCGATGCGCTGCACCAGGCGCTGGAAGGAAGCACGCTGGGGCTGCGCGGGCCTTTCGGCGCCGGCTT
TCCGCTCGCGGAAATGGAGGGGCACCCGGTGCTCCTCTTGGCGGGAGGGCTCGGCATCGCGCCGCTGCGCTCCCTGCTGC
TGCACCTGTTGCGCAACGGCGAACGCTTCGGGGAGATCACGCTGATGTACGGCGCGAAAAAGCCCCAGCTGATGCTCTTT
CGCGAAGAACTGGCGGAACTCGCCGCGCGCGGTGGGCTGCGGCTCTACCTGACGGTCGATTTCGCGCCCGAGGAGCCTTG
GGGCGGCTTCTCCTGCGCCGTGGGGCTCCTCCCCGACCTCTTGAAGGGATTCAGCTTCGACGCCGCCAACAGCTACGCCG
CCATATGCGGCCCCCCCGCCCTCTACCGCTGCCTGGGCGCCGACCTGGAAAGGGCCGGCGTCGCGCCGCAGCGGATCCTT
TTGAGCCTGGAGCGCAGGATGCGCTGCGGCATCGGGCGCTGCTGCCATTGCGCGCTGGGGCAGAAACTTTGCTGCGTGGA
CGGCCCCGTCTTCCGGCTCAGCGAGCTGAAAGAGATACCGGAGGCGCTATGA

Upstream 100 bases:

>100_bases
CCTCATGCGTTGGTTGCGGCCGCTGCAAGGAATTCTGCCCGGTCGGCATCGACCTGCGCGAGCTGTTCCAGGATCTTTCC
CTCGATTGCGGGAGGACGCC

Downstream 100 bases:

>100_bases
ACCGCCCAAGGCTCGCCATAGCAGGGCTCACCGCCTGCTCGGGGTGTCAGCTGACGCTGCTCAACTGCGAGGACGAATTG
GCCCAAGTGGCCGCCCGCTT

Product: cytochrome c3 hydrogenase FAD-binding subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTLLANHPDTPFAAKLLQRRQLSEDTALFTLAPEAAALPSLSRFIPGQFVQLSVPGAGEIPISPADLAHEDGTVDLCVRR
VGHVTDALHQALEGSTLGLRGPFGAGFPLAEMEGHPVLLLAGGLGIAPLRSLLLHLLRNGERFGEITLMYGAKKPQLMLF
REELAELAARGGLRLYLTVDFAPEEPWGGFSCAVGLLPDLLKGFSFDAANSYAAICGPPALYRCLGADLERAGVAPQRIL
LSLERRMRCGIGRCCHCALGQKLCCVDGPVFRLSELKEIPEAL

Sequences:

>Translated_283_residues
MTLLANHPDTPFAAKLLQRRQLSEDTALFTLAPEAAALPSLSRFIPGQFVQLSVPGAGEIPISPADLAHEDGTVDLCVRR
VGHVTDALHQALEGSTLGLRGPFGAGFPLAEMEGHPVLLLAGGLGIAPLRSLLLHLLRNGERFGEITLMYGAKKPQLMLF
REELAELAARGGLRLYLTVDFAPEEPWGGFSCAVGLLPDLLKGFSFDAANSYAAICGPPALYRCLGADLERAGVAPQRIL
LSLERRMRCGIGRCCHCALGQKLCCVDGPVFRLSELKEIPEAL
>Mature_282_residues
TLLANHPDTPFAAKLLQRRQLSEDTALFTLAPEAAALPSLSRFIPGQFVQLSVPGAGEIPISPADLAHEDGTVDLCVRRV
GHVTDALHQALEGSTLGLRGPFGAGFPLAEMEGHPVLLLAGGLGIAPLRSLLLHLLRNGERFGEITLMYGAKKPQLMLFR
EELAELAARGGLRLYLTVDFAPEEPWGGFSCAVGLLPDLLKGFSFDAANSYAAICGPPALYRCLGADLERAGVAPQRILL
SLERRMRCGIGRCCHCALGQKLCCVDGPVFRLSELKEIPEAL

Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- InterPro:   IPR014260 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30315; Mature: 30184

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLANHPDTPFAAKLLQRRQLSEDTALFTLAPEAAALPSLSRFIPGQFVQLSVPGAGEI
CCEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHCCCCEEEEECCCCCCC
PISPADLAHEDGTVDLCVRRVGHVTDALHQALEGSTLGLRGPFGAGFPLAEMEGHPVLLL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEE
AGGLGIAPLRSLLLHLLRNGERFGEITLMYGAKKPQLMLFREELAELAARGGLRLYLTVD
ECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
FAPEEPWGGFSCAVGLLPDLLKGFSFDAANSYAAICGPPALYRCLGADLERAGVAPQRIL
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCHHHHCCCHHHHH
LSLERRMRCGIGRCCHCALGQKLCCVDGPVFRLSELKEIPEAL
HHHHHHHHHCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLLANHPDTPFAAKLLQRRQLSEDTALFTLAPEAAALPSLSRFIPGQFVQLSVPGAGEI
CEECCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHCCCCEEEEECCCCCCC
PISPADLAHEDGTVDLCVRRVGHVTDALHQALEGSTLGLRGPFGAGFPLAEMEGHPVLLL
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCEEEE
AGGLGIAPLRSLLLHLLRNGERFGEITLMYGAKKPQLMLFREELAELAARGGLRLYLTVD
ECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
FAPEEPWGGFSCAVGLLPDLLKGFSFDAANSYAAICGPPALYRCLGADLERAGVAPQRIL
ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHCCCHHHHCCCHHHHH
LSLERRMRCGIGRCCHCALGQKLCCVDGPVFRLSELKEIPEAL
HHHHHHHHHCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]