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The map label for this gene is vhuG [H]

Identifier: 197118352

GI number: 197118352

Start: 2274285

End: 2275040

Strand: Reverse

Name: vhuG [H]

Synonym: Gbem_1969

Alternate gene names: 197118352

Gene position: 2275040-2274285 (Counterclockwise)

Preceding gene: 197118353

Following gene: 197118351

Centisome position: 49.3

GC content: 63.76

Gene sequence:

>756_bases
ATGAACCGCCCAAGGCTCGCCATAGCAGGGCTCACCGCCTGCTCGGGGTGTCAGCTGACGCTGCTCAACTGCGAGGACGA
ATTGGCCCAAGTGGCCGCCCGCTTCGATCTGGTCTCCTTTCCCATGGCGGAGAGCGTCGAGGGGGGAGCGCCCTTCGACG
CGGCGATAGTGGAGGGTGCGGTATCTACCCCGGGCGACCTGGCCAACCTGTTCCGGCTGAGGAATTCCAGCAGGCTTTTG
GTGGCCCTTGGCACCTGCGCCATCTTCGGCGGGGTGGCGGCCATGAACAACGGGGTCTCGACGAGAGAAGAACTGGTCGC
AGCCGTCTACGGAGATGGGGAGAAGACAGTGGAGAGCTTCGCCCCCGCCCCGCTTACCAACTTCGTAAGCGTCGACTTCT
CAATCACCGGCTGCCCCCCGGAAAAGCAAGAGGTCATGGCCCTACTCTGCGCCCTTCTTAATGGAACGCTCCCCCCGTTG
GCGACCTACCCGGTCTGCACCGAGTGCCGCAGCAGGGAAAACCTCTGCCTGCTCTTGGAGCGAAAGGAGCTTTGCCTCGG
CCCGATCATCCAGGGGGGATGCAACGCAAGATGCCCGGCGACGGGGATAGTCTGCGAAGGTTGCCGGGGACCGGTGCGCG
AGGCGAACGTGGCGCAGGAGTTGGAGCTGTTGTTGGAGCGCGGGTTTGGCAGGAAGGAAATCGAGCGCAGGATGAGCCGA
TTCAAGCCGGAGTGGGACTATGGGCAGCGTCGTTGA

Upstream 100 bases:

>100_bases
GCATCGGGCGCTGCTGCCATTGCGCGCTGGGGCAGAAACTTTGCTGCGTGGACGGCCCCGTCTTCCGGCTCAGCGAGCTG
AAAGAGATACCGGAGGCGCT

Downstream 100 bases:

>100_bases
GTTGAACCTGACCCGGGTGGAGGGTCACGGCAGCGTCAAGGTCTACCGCGAGGGGTCGCGCGTGGAGCGGGTGGAGCTAT
GTCTCACCGATTCTCCGCGG

Product: hydrogenase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNRPRLAIAGLTACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGAVSTPGDLANLFRLRNSSRLL
VALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESFAPAPLTNFVSVDFSITGCPPEKQEVMALLCALLNGTLPPL
ATYPVCTECRSRENLCLLLERKELCLGPIIQGGCNARCPATGIVCEGCRGPVREANVAQELELLLERGFGRKEIERRMSR
FKPEWDYGQRR

Sequences:

>Translated_251_residues
MNRPRLAIAGLTACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGAVSTPGDLANLFRLRNSSRLL
VALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESFAPAPLTNFVSVDFSITGCPPEKQEVMALLCALLNGTLPPL
ATYPVCTECRSRENLCLLLERKELCLGPIIQGGCNARCPATGIVCEGCRGPVREANVAQELELLLERGFGRKEIERRMSR
FKPEWDYGQRR
>Mature_251_residues
MNRPRLAIAGLTACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGAVSTPGDLANLFRLRNSSRLL
VALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESFAPAPLTNFVSVDFSITGCPPEKQEVMALLCALLNGTLPPL
ATYPVCTECRSRENLCLLLERKELCLGPIIQGGCNARCPATGIVCEGCRGPVREANVAQELELLLERGFGRKEIERRMSR
FKPEWDYGQRR

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 26973; Mature: 26973

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPRLAIAGLTACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGA
CCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHCC
VSTPGDLANLFRLRNSSRLLVALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESF
CCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHC
APAPLTNFVSVDFSITGCPPEKQEVMALLCALLNGTLPPLATYPVCTECRSRENLCLLLE
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEE
RKELCLGPIIQGGCNARCPATGIVCEGCRGPVREANVAQELELLLERGFGRKEIERRMSR
CCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FKPEWDYGQRR
CCCCCCCCCCC
>Mature Secondary Structure
MNRPRLAIAGLTACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGA
CCCCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHCC
VSTPGDLANLFRLRNSSRLLVALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESF
CCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHC
APAPLTNFVSVDFSITGCPPEKQEVMALLCALLNGTLPPLATYPVCTECRSRENLCLLLE
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEE
RKELCLGPIIQGGCNARCPATGIVCEGCRGPVREANVAQELELLLERGFGRKEIERRMSR
CCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FKPEWDYGQRR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]