Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118209

Identifier: 197118209

GI number: 197118209

Start: 2118484

End: 2119275

Strand: Direct

Name: 197118209

Synonym: Gbem_1825

Alternate gene names: NA

Gene position: 2118484-2119275 (Clockwise)

Preceding gene: 197118208

Following gene: 197118211

Centisome position: 45.9

GC content: 64.65

Gene sequence:

>792_bases
ATGACTATCTGGCTTTCGTATGTCGCCCTGGGGGCTTTTGCCGGGGTTTTGGCCGGCCTCCTCGGAGTGGGCGGCGGCCT
GGTGATCGTACCGGTCCTTACCTTCATCTTCACCGCGCAGCACCTGCCTGAGGCGCACATCCTGCACCTGGCCCTGGGCA
CCTCGCTTGCCAGCATCATGTTCACCTCGGTCTCCAGCCTTAGGGCCCATCACCGCCGGGGCGCCGTCGAGTGGACGGTG
GTGCGGCGCATCAGCGCCGGCATCCTGGTCGGCACCTTCGCCGGTTCCTGGGTCGCCTCCCAACTTTCCACCCGTTTCCT
CAAGGGCTTCTTCGTCGTCTTCCTGTACTACGTCGCCGCGCAGATGCTGCTCAACATCAAGCCCAAAGCGCAGCGCCAGC
TCCCTGGACTGGCGGCCATGTCCGGCGTCGGCGGCATCATCGGCGGCGTTTCCAGCCTGGTCGGCATCGGCGGCGGTACC
ATGACCGTTCCTTTCCTGGTCTGGTGCAACGTAGCCATCCCCCGTGCCATCGGCACCTCTTCGGCGGTCGGCTTTCCCAT
TGCCCTGGCCGGGGCGGCCGGGTACCTGGTCAACGGCTGGTCCGCGGACCTCCCTCAATACAGCCTCGGCTTCGTGTATC
TCCCCGCCTTGGCGGGTATTTCCGCGGCCAGCATCATAACTGCGCCCCTGGGCGCCAAGCTTGCCCACTCCCTTCCCATC
GACCTGCTGAAGAAGTTCTTCGCGCTGCTCCTGCTCGTGATGGGAACCAAGATGATGCTGAGCCTGTTTTGA

Upstream 100 bases:

>100_bases
TTATTTCTGTCTTTTTCACTCCGCCTTTTTATTTGCTGTTTGAAAAACCGCACGGTCCCGCGTATGATGCCTTGCCAAAA
CTGGTACCGTGAGAATGCTA

Downstream 100 bases:

>100_bases
CGCTGTCGATGCAGTTGCATGACGAGCTGGACCCGGCTTTCGCGACGTACGTGAAACTCGCGGAGGAGGCTCCGGCGCCA
GGGTTAATTCAAAAGATGGG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTIWLSYVALGAFAGVLAGLLGVGGGLVIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTV
VRRISAGILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAAQMLLNIKPKAQRQLPGLAAMSGVGGIIGGVSSLVGIGGGT
MTVPFLVWCNVAIPRAIGTSSAVGFPIALAGAAGYLVNGWSADLPQYSLGFVYLPALAGISAASIITAPLGAKLAHSLPI
DLLKKFFALLLLVMGTKMMLSLF

Sequences:

>Translated_263_residues
MTIWLSYVALGAFAGVLAGLLGVGGGLVIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTV
VRRISAGILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAAQMLLNIKPKAQRQLPGLAAMSGVGGIIGGVSSLVGIGGGT
MTVPFLVWCNVAIPRAIGTSSAVGFPIALAGAAGYLVNGWSADLPQYSLGFVYLPALAGISAASIITAPLGAKLAHSLPI
DLLKKFFALLLLVMGTKMMLSLF
>Mature_262_residues
TIWLSYVALGAFAGVLAGLLGVGGGLVIVPVLTFIFTAQHLPEAHILHLALGTSLASIMFTSVSSLRAHHRRGAVEWTVV
RRISAGILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAAQMLLNIKPKAQRQLPGLAAMSGVGGIIGGVSSLVGIGGGTM
TVPFLVWCNVAIPRAIGTSSAVGFPIALAGAAGYLVNGWSADLPQYSLGFVYLPALAGISAASIITAPLGAKLAHSLPID
LLKKFFALLLLVMGTKMMLSLF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27353; Mature: 27222

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIWLSYVALGAFAGVLAGLLGVGGGLVIVPVLTFIFTAQHLPEAHILHLALGTSLASIM
EEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FTSVSSLRAHHRRGAVEWTVVRRISAGILVGTFAGSWVASQLSTRFLKGFFVVFLYYVAA
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QMLLNIKPKAQRQLPGLAAMSGVGGIIGGVSSLVGIGGGTMTVPFLVWCNVAIPRAIGTS
HHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
SAVGFPIALAGAAGYLVNGWSADLPQYSLGFVYLPALAGISAASIITAPLGAKLAHSLPI
CCCCCHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
DLLKKFFALLLLVMGTKMMLSLF
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]