| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118150
Identifier: 197118150
GI number: 197118150
Start: 2033577
End: 2034290
Strand: Reverse
Name: 197118150
Synonym: Gbem_1765
Alternate gene names: NA
Gene position: 2034290-2033577 (Counterclockwise)
Preceding gene: 197118151
Following gene: 197118145
Centisome position: 44.08
GC content: 48.74
Gene sequence:
>714_bases ATGACCGATCCCGTGTATTTTCCATGGCTTAATATGGCCATCTATCGACGCACTGTCCCCTTCGCCATGTTCATGGCATT CGTTGCATTAGAGGAAACCTTCCGGTATGCCATACAGCAGCACTGGCTGGATCAACCTATCACTGCGTTGTACTACCTCT ATCCGATAAAGACTGTTGCAGTAGCTTTGCTGCTATACAAGCAATCACCATTTTACCATGAAATACGCATCCAGGATCTT GGACAACTGTGGCGTACTGTTTCTGTCGCCCTAATCGGTCTTTTGACATTCGCAATTTGGGTTTCAGCAGATTGGGTCGT CACACTCGCGTCCCCTCTTAGCGGCTTCAATCCGATGCTGCTGCCAGACGAAGTGGTAAGGGTATTAATGACTGCCTTTC GGGTTGTCGGTGCCGTCCTCGTTGTGCCTATCATGGAGGAAGTATTCTGGAGATCCTTTCTGCTGCGCTATCTTGTGGAT ACGGACTTCGAATCGATCCCGATTGGCTCCTTCACCTGGAGTTCTTTCCTCATCTCTACAGTTTTGTTCGGCTTGGAACA CCATCTTATCGTAGCCGGTATGATAGCCAGCGTCTTTTATAGCCTCATAGTGTACAAGACCAAAAGCATTGCGCAATGCA TTCTGGCACACGCCATTACCAACTTTGCCCTCGCCTGCTTTGTGCTTTTCACCGGCAAATGGCACTTCTGGTAA
Upstream 100 bases:
>100_bases ACATTGCGTCAACTGTAAAAGATCCCGACACATTTACTTTCTTCCGAAGCCGCCTCTGCTTTATAGCTGAAGATCTTAGA TTGTGGCAATAGGGGCTATC
Downstream 100 bases:
>100_bases ATGAAACTACCTTTCAAACTCAGTCACAACCACCCGTTATTGCCACTCGCGCTGTGCTACCCCAATCCACCTCAGAAAAT CTGGTGACGTGTGTTTGATG
Product: protease, Abi superfamily
Products: NA
Alternate protein names: CAAX Prenyl Protease-Related Protein; CAAX Amino Terminal Protease Family Protein; Caax Prenyl Protease-Related Protein; Protease Abi Superfamily
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTDPVYFPWLNMAIYRRTVPFAMFMAFVALEETFRYAIQQHWLDQPITALYYLYPIKTVAVALLLYKQSPFYHEIRIQDL GQLWRTVSVALIGLLTFAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLVVPIMEEVFWRSFLLRYLVD TDFESIPIGSFTWSSFLISTVLFGLEHHLIVAGMIASVFYSLIVYKTKSIAQCILAHAITNFALACFVLFTGKWHFW
Sequences:
>Translated_237_residues MTDPVYFPWLNMAIYRRTVPFAMFMAFVALEETFRYAIQQHWLDQPITALYYLYPIKTVAVALLLYKQSPFYHEIRIQDL GQLWRTVSVALIGLLTFAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLVVPIMEEVFWRSFLLRYLVD TDFESIPIGSFTWSSFLISTVLFGLEHHLIVAGMIASVFYSLIVYKTKSIAQCILAHAITNFALACFVLFTGKWHFW >Mature_236_residues TDPVYFPWLNMAIYRRTVPFAMFMAFVALEETFRYAIQQHWLDQPITALYYLYPIKTVAVALLLYKQSPFYHEIRIQDLG QLWRTVSVALIGLLTFAIWVSADWVVTLASPLSGFNPMLLPDEVVRVLMTAFRVVGAVLVVPIMEEVFWRSFLLRYLVDT DFESIPIGSFTWSSFLISTVLFGLEHHLIVAGMIASVFYSLIVYKTKSIAQCILAHAITNFALACFVLFTGKWHFW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27299; Mature: 27167
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPVYFPWLNMAIYRRTVPFAMFMAFVALEETFRYAIQQHWLDQPITALYYLYPIKTVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VALLLYKQSPFYHEIRIQDLGQLWRTVSVALIGLLTFAIWVSADWVVTLASPLSGFNPML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC LPDEVVRVLMTAFRVVGAVLVVPIMEEVFWRSFLLRYLVDTDFESIPIGSFTWSSFLIST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VLFGLEHHLIVAGMIASVFYSLIVYKTKSIAQCILAHAITNFALACFVLFTGKWHFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDPVYFPWLNMAIYRRTVPFAMFMAFVALEETFRYAIQQHWLDQPITALYYLYPIKTVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VALLLYKQSPFYHEIRIQDLGQLWRTVSVALIGLLTFAIWVSADWVVTLASPLSGFNPML HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC LPDEVVRVLMTAFRVVGAVLVVPIMEEVFWRSFLLRYLVDTDFESIPIGSFTWSSFLIST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VLFGLEHHLIVAGMIASVFYSLIVYKTKSIAQCILAHAITNFALACFVLFTGKWHFW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA