Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118145

Identifier: 197118145

GI number: 197118145

Start: 2028407

End: 2029195

Strand: Reverse

Name: 197118145

Synonym: Gbem_1760

Alternate gene names: NA

Gene position: 2029195-2028407 (Counterclockwise)

Preceding gene: 197118150

Following gene: 197118143

Centisome position: 43.97

GC content: 53.23

Gene sequence:

>789_bases
ATGCAGTCCATCACGCGTGTAAGCGATCACGAGATAGTCACCTTCCAACAGTTGACGGCAAAGGCCAAAGCAGCCGACCT
AGTGCTGATTGGCGAGGTCCACGACAAGCCGGCTGCCCATGAACTGCAACTATCGATCATTCGCTCACTCCAAGACCATA
AACAACGGATGGCTATCGGACTGGAAGTGATGCAGTCCAATAGCCAGCAGCAACTCGACAACTGGGTCAGCGGCAAAATG
ACCGAGGAGCAGTTCCAGCCTGTCTTCGCGCAGAACTGGACCTACGACTGGCGCCTTTACCGCGAAATTTTCTTGTTTGC
CCGGGACAACAAGATCCCTTTGGTCGCCTTGAATGTCCCCAGAGAGACAGTGATAAAAGTTTCGCGACAGGGGTACAAGG
CATTAACCGAGGAGGAGAGAAAAGGGTTGTCAATCGGAACCAATGCCGATCTCAACAACACGCACACCGAGTTCCTAAAG
CGGACGTTCCAGCCGCTTTTCGAAAGTGTATCCAACGGGCGCGTGTTCCAGTACTTCTGCGAGGCTCAGACCTTGCGCAA
CAGCGGAATGGCGATGACCGTGGCGCACTACGTGAAACAACAACCGAAGACGAAAATGGTGCTGCTCACGGGGATCTGGC
ACGCCGTCAAAAACGCCATCCCTGAGCAGTTGGACCGAAGCGGCAACAAGATGAGCAGTGTAGTGATTATGCCTGAAATC
CAGGAGTTCAGCGGCGGAAAGGCAACTACCGACGTAATAGATTATCTTGTCCAACTACCGACTCCGTAA

Upstream 100 bases:

>100_bases
ATTTCCTGTTGTCACACGCCCCAGCGGAGATTGCAGATGCTCATCATGCTTCGTACGCCGTTACTATTGCTGTTATGCCT
CTTTGGGTCTGTCCAAGCCC

Downstream 100 bases:

>100_bases
CAGGAGGAAAGTTTCGCCCTCTATACCTGCCGAAATCAAAACTGTGGGCATTCATGCCGTCGCAACATCCCGTACGGTAG
GAGTGCCCAAAGTTTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQSITRVSDHEIVTFQQLTAKAKAADLVLIGEVHDKPAAHELQLSIIRSLQDHKQRMAIGLEVMQSNSQQQLDNWVSGKM
TEEQFQPVFAQNWTYDWRLYREIFLFARDNKIPLVALNVPRETVIKVSRQGYKALTEEERKGLSIGTNADLNNTHTEFLK
RTFQPLFESVSNGRVFQYFCEAQTLRNSGMAMTVAHYVKQQPKTKMVLLTGIWHAVKNAIPEQLDRSGNKMSSVVIMPEI
QEFSGGKATTDVIDYLVQLPTP

Sequences:

>Translated_262_residues
MQSITRVSDHEIVTFQQLTAKAKAADLVLIGEVHDKPAAHELQLSIIRSLQDHKQRMAIGLEVMQSNSQQQLDNWVSGKM
TEEQFQPVFAQNWTYDWRLYREIFLFARDNKIPLVALNVPRETVIKVSRQGYKALTEEERKGLSIGTNADLNNTHTEFLK
RTFQPLFESVSNGRVFQYFCEAQTLRNSGMAMTVAHYVKQQPKTKMVLLTGIWHAVKNAIPEQLDRSGNKMSSVVIMPEI
QEFSGGKATTDVIDYLVQLPTP
>Mature_262_residues
MQSITRVSDHEIVTFQQLTAKAKAADLVLIGEVHDKPAAHELQLSIIRSLQDHKQRMAIGLEVMQSNSQQQLDNWVSGKM
TEEQFQPVFAQNWTYDWRLYREIFLFARDNKIPLVALNVPRETVIKVSRQGYKALTEEERKGLSIGTNADLNNTHTEFLK
RTFQPLFESVSNGRVFQYFCEAQTLRNSGMAMTVAHYVKQQPKTKMVLLTGIWHAVKNAIPEQLDRSGNKMSSVVIMPEI
QEFSGGKATTDVIDYLVQLPTP

Specific function: Unknown

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29866; Mature: 29866

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSITRVSDHEIVTFQQLTAKAKAADLVLIGEVHDKPAAHELQLSIIRSLQDHKQRMAIG
CCCCCCCCCCCEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEVMQSNSQQQLDNWVSGKMTEEQFQPVFAQNWTYDWRLYREIFLFARDNKIPLVALNVP
HHHHHCCCHHHHHHHHCCCCCHHHHCCHHHCCCCHHHHHHHHHHHEECCCCCCEEEEECC
RETVIKVSRQGYKALTEEERKGLSIGTNADLNNTHTEFLKRTFQPLFESVSNGRVFQYFC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHH
EAQTLRNSGMAMTVAHYVKQQPKTKMVLLTGIWHAVKNAIPEQLDRSGNKMSSVVIMPEI
HHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECH
QEFSGGKATTDVIDYLVQLPTP
HHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSITRVSDHEIVTFQQLTAKAKAADLVLIGEVHDKPAAHELQLSIIRSLQDHKQRMAIG
CCCCCCCCCCCEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEVMQSNSQQQLDNWVSGKMTEEQFQPVFAQNWTYDWRLYREIFLFARDNKIPLVALNVP
HHHHHCCCHHHHHHHHCCCCCHHHHCCHHHCCCCHHHHHHHHHHHEECCCCCCEEEEECC
RETVIKVSRQGYKALTEEERKGLSIGTNADLNNTHTEFLKRTFQPLFESVSNGRVFQYFC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHH
EAQTLRNSGMAMTVAHYVKQQPKTKMVLLTGIWHAVKNAIPEQLDRSGNKMSSVVIMPEI
HHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECH
QEFSGGKATTDVIDYLVQLPTP
HHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA