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The map label for this gene is ycjS [H]

Identifier: 197118072

GI number: 197118072

Start: 1951077

End: 1952078

Strand: Direct

Name: ycjS [H]

Synonym: Gbem_1686

Alternate gene names: 197118072

Gene position: 1951077-1952078 (Clockwise)

Preceding gene: 197118071

Following gene: 197118073

Centisome position: 42.28

GC content: 65.57

Gene sequence:

>1002_bases
ATGAAGAAAAAGCAACCACTCCCGAGAATAGGCTTCCTGGGGACCGGCTGGATCGGTCGCCATCGCCTGAAGGCGATACT
GGAAAGCAAAGAAGCCGAGGTAGCATGCATCGCCGACGTCTGCCGGGAAAATGCCAGCGACGCGGCAAAGCTCGCCCCCG
GCGCCTTGGTAGTCGACTCGCTGGACGCGCTTCTTGAGCTTGGGCTCGACGCGGTGGTGATCGCCACACCCAGCGCGGGG
CACTGCTCCCAGGCGGTAAGGGCGCTGGAGGCGGGTCTCTCGGTATTTTGCCAGAAGCCTCTGGGCAGGAGCGCCTATGA
GGCGCAGATGGTGGTGGACACGGCCCGGGCGGCCAATCGCCTCTTGGGCGTCGACTTCTCCTACCGTTTCACCGATGCCG
TCCGGAAGATGCACGAACTGGTCGGCTCCGGCGAACTCGGCGAGGTCTACGCCGCCGACCTCGTCTTCCATAACGCCTAC
GGCCCGGACAAGGCATGGTTCTACGACGCCGAACTATCGGGCGGGGGGTGCCTCATGGATCTCGGGAGCCACCTGGTCGA
TCTCGCCCTCTGGTTTTTCGACTACCCCCAGGTCCGTAGCGTCTCCAGCTCCATCTTCTCGGGCGGCGAAAGGCTCAAGG
GGGGATCCGGCAAGGTCGAGGACTACGCCGTCGTCTCGCTGGTGCTGGAAAACGGGCACGCGGTGCGGGTGGCCTGCTCC
TGGAACGTCTCCGCCGGGCGGGACGCGGTGATCGAGTCGAGTTTCTACGGGACCCAGGGAGGGGTCGCCTTCCGGAACGT
CCAGGGCTCCTTCTACGATTTCGTCGCCGAACGTTTCCGAGGCACCAGCGCAGAGACCATCGCCACCCCGCCGGACGACT
GGGGGGGGAGGTGCGCCGTGGACTGGGTGCGTCAGTTGAGGACCGGGGGAGGGAGCTACAACCCCCAGGCGGAAAACCTG
GTCCAGGTGGCGGCGGTACTGGACGCGGCCTACGGCAGGTAG

Upstream 100 bases:

>100_bases
GCGCTGGAGCATCTGGGGGAAGCGTACCGGGCGCTGGACCAGCGGCCGGACGGCTTCCTGAAAGGGATCGTCCGCATCGA
TCATTAAAAAAGGGGAAGCG

Downstream 100 bases:

>100_bases
CCGCTTGAGTCCCCGCCCCCGGAGGGGGAGGAGAGAGAGCAGGAGGACGGCAGTTGCTATGACCGAGACGGATTACAAAA
AAGGGTGCGACGAGGGGGGC

Product: NAD(P)-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKKKQPLPRIGFLGTGWIGRHRLKAILESKEAEVACIADVCRENASDAAKLAPGALVVDSLDALLELGLDAVVIATPSAG
HCSQAVRALEAGLSVFCQKPLGRSAYEAQMVVDTARAANRLLGVDFSYRFTDAVRKMHELVGSGELGEVYAADLVFHNAY
GPDKAWFYDAELSGGGCLMDLGSHLVDLALWFFDYPQVRSVSSSIFSGGERLKGGSGKVEDYAVVSLVLENGHAVRVACS
WNVSAGRDAVIESSFYGTQGGVAFRNVQGSFYDFVAERFRGTSAETIATPPDDWGGRCAVDWVRQLRTGGGSYNPQAENL
VQVAAVLDAAYGR

Sequences:

>Translated_333_residues
MKKKQPLPRIGFLGTGWIGRHRLKAILESKEAEVACIADVCRENASDAAKLAPGALVVDSLDALLELGLDAVVIATPSAG
HCSQAVRALEAGLSVFCQKPLGRSAYEAQMVVDTARAANRLLGVDFSYRFTDAVRKMHELVGSGELGEVYAADLVFHNAY
GPDKAWFYDAELSGGGCLMDLGSHLVDLALWFFDYPQVRSVSSSIFSGGERLKGGSGKVEDYAVVSLVLENGHAVRVACS
WNVSAGRDAVIESSFYGTQGGVAFRNVQGSFYDFVAERFRGTSAETIATPPDDWGGRCAVDWVRQLRTGGGSYNPQAENL
VQVAAVLDAAYGR
>Mature_333_residues
MKKKQPLPRIGFLGTGWIGRHRLKAILESKEAEVACIADVCRENASDAAKLAPGALVVDSLDALLELGLDAVVIATPSAG
HCSQAVRALEAGLSVFCQKPLGRSAYEAQMVVDTARAANRLLGVDFSYRFTDAVRKMHELVGSGELGEVYAADLVFHNAY
GPDKAWFYDAELSGGGCLMDLGSHLVDLALWFFDYPQVRSVSSSIFSGGERLKGGSGKVEDYAVVSLVLENGHAVRVACS
WNVSAGRDAVIESSFYGTQGGVAFRNVQGSFYDFVAERFRGTSAETIATPPDDWGGRCAVDWVRQLRTGGGSYNPQAENL
VQVAAVLDAAYGR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=273, Percent_Identity=29.6703296703297, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35638; Mature: 35638

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKQPLPRIGFLGTGWIGRHRLKAILESKEAEVACIADVCRENASDAAKLAPGALVVDS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHH
LDALLELGLDAVVIATPSAGHCSQAVRALEAGLSVFCQKPLGRSAYEAQMVVDTARAANR
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLGVDFSYRFTDAVRKMHELVGSGELGEVYAADLVFHNAYGPDKAWFYDAELSGGGCLMD
HCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCCCCEEEEEECCCCCHHHH
LGSHLVDLALWFFDYPQVRSVSSSIFSGGERLKGGSGKVEDYAVVSLVLENGHAVRVACS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEE
WNVSAGRDAVIESSFYGTQGGVAFRNVQGSFYDFVAERFRGTSAETIATPPDDWGGRCAV
ECCCCCCCHHEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
DWVRQLRTGGGSYNPQAENLVQVAAVLDAAYGR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKQPLPRIGFLGTGWIGRHRLKAILESKEAEVACIADVCRENASDAAKLAPGALVVDS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHH
LDALLELGLDAVVIATPSAGHCSQAVRALEAGLSVFCQKPLGRSAYEAQMVVDTARAANR
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLGVDFSYRFTDAVRKMHELVGSGELGEVYAADLVFHNAYGPDKAWFYDAELSGGGCLMD
HCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCCCCEEEEEECCCCCHHHH
LGSHLVDLALWFFDYPQVRSVSSSIFSGGERLKGGSGKVEDYAVVSLVLENGHAVRVACS
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEE
WNVSAGRDAVIESSFYGTQGGVAFRNVQGSFYDFVAERFRGTSAETIATPPDDWGGRCAV
ECCCCCCCHHEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
DWVRQLRTGGGSYNPQAENLVQVAAVLDAAYGR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]