| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118073
Identifier: 197118073
GI number: 197118073
Start: 1952137
End: 1953264
Strand: Direct
Name: 197118073
Synonym: Gbem_1687
Alternate gene names: NA
Gene position: 1952137-1953264 (Clockwise)
Preceding gene: 197118072
Following gene: 197118074
Centisome position: 42.3
GC content: 68.09
Gene sequence:
>1128_bases ATGACCGAGACGGATTACAAAAAAGGGTGCGACGAGGGGGGCGTCTCGGCTCCGCCCCGACTGATCCTGATGACCGCGGA TACCATCGGCGGCGTCTGGACCTACGTGCTGGAGCTTGCGCGCGGCCTTTCGGTGTTCGGCGTGGAGGTGGCTCTCGCCA CCATGGGGCAGCCCCTTTCCCAGGAGCAGCGGCGCGAGGTGGCGGACGAAGGGAACGTTACCCTGTATGAAAGCGGCTAT CGGCTGGAGTGGATGGACGACCCCTGGGCCGACGTGGAGCTAAGCGGGGCCTGGCTCCTGGAGCTGGAGGACCGCCTGCG CCCGGACCTGGTGCACCTGAACGGCTACGCCCACGCCGCGCTCCCATGGCAGAGCCCCTGCCTCGTGGTCGCCCACTCCT GCCTCCTCTCCTGGTGGCAGGCGGTGCGACGGGAGGATCTCCCCTCCAGATACCAGCAATACCGGCAGCGGGTGGCGCAG GGACTCGCCGCCGCCGACCTCGTCGCGGCCCCTTCGGCCGCCATGCTTCGGAACATCCAGACGCTGTACCTCCCCCTTCC CGAGGGGAGGGTGGTTCATAACGCCCGCAGCCGCACCAGGTTCCGCCCCGGGCACAAGGAGGATTTCATCCTTTCAGTAG GGAGGGTCTGGGACGAGGCGAAGAACATCGGCGCCCTGGTAAAAAATGCCTGCGACCTCCCCTGGCCGGTGTACGTAGCG GGCGAGATCAACCACCCCGGCGGGGGGAGCGTGACCATGGGCGGGGTGAACCGGCTCGGTTTCCTCTCGCCCGACGAACT GGCCCCCTGGTACGCGGCGGCCTCGGTCTACGCGCTGCCGGCGCGCTACGAGCCTTTCGGCCTCACCGTGCTGGAGGCGG CGCTCTCCGGCTGCGCCCTGGTGCTTGGCGACATCCCGAGCCTACGCGAACTGTGGGACGGCGCCGCGATCTTCGTGGAC CCGGATTCCCCAGACCTGCTCCAGGAGGAACTCTGCCGGCTCTGCGCCGACCGCGCGAGGCAGGAGAGCCTGGGGAACAA GGCGCTGGCGCAAAGCCGCAAATTCACCGCGGCCAAGATGGTGGCGGGTTACCTGTCGCTGTACCGCCAGTTGTGCCGGG TAAGCTGA
Upstream 100 bases:
>100_bases GTCCAGGTGGCGGCGGTACTGGACGCGGCCTACGGCAGGTAGCCGCTTGAGTCCCCGCCCCCGGAGGGGGAGGAGAGAGA GCAGGAGGACGGCAGTTGCT
Downstream 100 bases:
>100_bases CCTTCCCCCGCCCCGACCCTTGCTGGGGGAGGGGGACAACCAGAGGATTGCCCGATGCGTGTCGTCATGTTTTATCACTC CCTGGTCTCGGACTGGAACC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase Protein; Glycosyltransferase; Mannosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase B
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGY RLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQ GLAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVD PDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS
Sequences:
>Translated_375_residues MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGY RLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQ GLAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVD PDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS >Mature_374_residues TETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGYR LEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQG LAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVAG EINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVDP DSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41325; Mature: 41193
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLS CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC QEQRREVADEGNVTLYESGYRLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAA HHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEECCEEEEEEHHCCCCCEEEECCEEEEE LPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQGLAAADLVAAPSAAMLRNIQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC TLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA EEEEECCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCAL EECCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCHHE VLGDIPSLRELWDGAAIFVDPDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKM ECCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VAGYLSLYRQLCRVS HHHHHHHHHHHHCCC >Mature Secondary Structure TETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLS CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC QEQRREVADEGNVTLYESGYRLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAA HHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEECCEEEEEEHHCCCCCEEEECCEEEEE LPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQGLAAADLVAAPSAAMLRNIQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC TLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA EEEEECCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCAL EECCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCHHE VLGDIPSLRELWDGAAIFVDPDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKM ECCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VAGYLSLYRQLCRVS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA