Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118073

Identifier: 197118073

GI number: 197118073

Start: 1952137

End: 1953264

Strand: Direct

Name: 197118073

Synonym: Gbem_1687

Alternate gene names: NA

Gene position: 1952137-1953264 (Clockwise)

Preceding gene: 197118072

Following gene: 197118074

Centisome position: 42.3

GC content: 68.09

Gene sequence:

>1128_bases
ATGACCGAGACGGATTACAAAAAAGGGTGCGACGAGGGGGGCGTCTCGGCTCCGCCCCGACTGATCCTGATGACCGCGGA
TACCATCGGCGGCGTCTGGACCTACGTGCTGGAGCTTGCGCGCGGCCTTTCGGTGTTCGGCGTGGAGGTGGCTCTCGCCA
CCATGGGGCAGCCCCTTTCCCAGGAGCAGCGGCGCGAGGTGGCGGACGAAGGGAACGTTACCCTGTATGAAAGCGGCTAT
CGGCTGGAGTGGATGGACGACCCCTGGGCCGACGTGGAGCTAAGCGGGGCCTGGCTCCTGGAGCTGGAGGACCGCCTGCG
CCCGGACCTGGTGCACCTGAACGGCTACGCCCACGCCGCGCTCCCATGGCAGAGCCCCTGCCTCGTGGTCGCCCACTCCT
GCCTCCTCTCCTGGTGGCAGGCGGTGCGACGGGAGGATCTCCCCTCCAGATACCAGCAATACCGGCAGCGGGTGGCGCAG
GGACTCGCCGCCGCCGACCTCGTCGCGGCCCCTTCGGCCGCCATGCTTCGGAACATCCAGACGCTGTACCTCCCCCTTCC
CGAGGGGAGGGTGGTTCATAACGCCCGCAGCCGCACCAGGTTCCGCCCCGGGCACAAGGAGGATTTCATCCTTTCAGTAG
GGAGGGTCTGGGACGAGGCGAAGAACATCGGCGCCCTGGTAAAAAATGCCTGCGACCTCCCCTGGCCGGTGTACGTAGCG
GGCGAGATCAACCACCCCGGCGGGGGGAGCGTGACCATGGGCGGGGTGAACCGGCTCGGTTTCCTCTCGCCCGACGAACT
GGCCCCCTGGTACGCGGCGGCCTCGGTCTACGCGCTGCCGGCGCGCTACGAGCCTTTCGGCCTCACCGTGCTGGAGGCGG
CGCTCTCCGGCTGCGCCCTGGTGCTTGGCGACATCCCGAGCCTACGCGAACTGTGGGACGGCGCCGCGATCTTCGTGGAC
CCGGATTCCCCAGACCTGCTCCAGGAGGAACTCTGCCGGCTCTGCGCCGACCGCGCGAGGCAGGAGAGCCTGGGGAACAA
GGCGCTGGCGCAAAGCCGCAAATTCACCGCGGCCAAGATGGTGGCGGGTTACCTGTCGCTGTACCGCCAGTTGTGCCGGG
TAAGCTGA

Upstream 100 bases:

>100_bases
GTCCAGGTGGCGGCGGTACTGGACGCGGCCTACGGCAGGTAGCCGCTTGAGTCCCCGCCCCCGGAGGGGGAGGAGAGAGA
GCAGGAGGACGGCAGTTGCT

Downstream 100 bases:

>100_bases
CCTTCCCCCGCCCCGACCCTTGCTGGGGGAGGGGGACAACCAGAGGATTGCCCGATGCGTGTCGTCATGTTTTATCACTC
CCTGGTCTCGGACTGGAACC

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase Protein; Glycosyltransferase; Mannosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase B

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGY
RLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQ
GLAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA
GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVD
PDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS

Sequences:

>Translated_375_residues
MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGY
RLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQ
GLAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA
GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVD
PDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS
>Mature_374_residues
TETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLSQEQRREVADEGNVTLYESGYR
LEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAALPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQG
LAAADLVAAPSAAMLRNIQTLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVAG
EINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCALVLGDIPSLRELWDGAAIFVDP
DSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKMVAGYLSLYRQLCRVS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41325; Mature: 41193

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLS
CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
QEQRREVADEGNVTLYESGYRLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAA
HHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEECCEEEEEEHHCCCCCEEEECCEEEEE
LPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQGLAAADLVAAPSAAMLRNIQ
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
TLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA
EEEEECCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCAL
EECCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCHHE
VLGDIPSLRELWDGAAIFVDPDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKM
ECCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VAGYLSLYRQLCRVS
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TETDYKKGCDEGGVSAPPRLILMTADTIGGVWTYVLELARGLSVFGVEVALATMGQPLS
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
QEQRREVADEGNVTLYESGYRLEWMDDPWADVELSGAWLLELEDRLRPDLVHLNGYAHAA
HHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEECCEEEEEEHHCCCCCEEEECCEEEEE
LPWQSPCLVVAHSCLLSWWQAVRREDLPSRYQQYRQRVAQGLAAADLVAAPSAAMLRNIQ
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
TLYLPLPEGRVVHNARSRTRFRPGHKEDFILSVGRVWDEAKNIGALVKNACDLPWPVYVA
EEEEECCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
GEINHPGGGSVTMGGVNRLGFLSPDELAPWYAAASVYALPARYEPFGLTVLEAALSGCAL
EECCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHEECCCCCCCCCHHHHHHHHHCHHE
VLGDIPSLRELWDGAAIFVDPDSPDLLQEELCRLCADRARQESLGNKALAQSRKFTAAKM
ECCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
VAGYLSLYRQLCRVS
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA