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The map label for this gene is ctpA-1 [H]

Identifier: 197118033

GI number: 197118033

Start: 1911138

End: 1912514

Strand: Reverse

Name: ctpA-1 [H]

Synonym: Gbem_1646

Alternate gene names: 197118033

Gene position: 1912514-1911138 (Counterclockwise)

Preceding gene: 197118036

Following gene: 197118032

Centisome position: 41.44

GC content: 62.6

Gene sequence:

>1377_bases
ATGTCAAAAAAGGTTTTCGCCGCATTTGCCGTGATTTTTCTCCTCCTCTCGCTCGTCTTGATGCTTCCCCTGATGGACCG
GGAGGAGCGGGCCAAGAGAAGCGAGGCCGAGTACCTCGAGATGTTCCGCGACGTCGTCAACATCGTCAAGCAAAGCTACG
TGGACAAGGTCGACGACAAGAAGCTCATGGCCGTCGCCATCAACGGGATGCTGGCGACGCTCGACCCACACAGCAACTAT
CTCCCAGCAACCGACTATACCGAAATGAAGGTGCACATGGCCGGTGCCTTCGGCGGCCTCGGGATCGAACTGGAGATGCG
CAACGGCAAGCTGATGGTGAACGCCCCCATCGAGGACACCCCCGCCTTCCGGGCCGGGATCCAGTCCGGCGACCACATCT
GGACCATCGACGGTAAACCTACCGCCGACCTCAACATCAACCAGTGCGTAAGCCGCATGCGCGGAACCCCAGGAACCTCG
GTAACCCTCGGCATACTGCGCGAGGGTAAGTCGTCCCCTCTCACCTTCCGCCTGGTGCGTGCCATCATCAAGACCAAGAG
CCTGAAAGGGAGGCTCCTTGAGCCTGGGTACGGCTATATCCGGATCGGCGAATTCCAGGAGCGCACCGGCGAGGACTTCG
AAAAGGCACTGAAAACGCTTGCCGCCGATAACGGCCAGCCGCTTTCTGGCCTCGTGCTGGACCTCCGGTTCAACCCGGGC
GGACTGGTGGACCAGGCCTGCCGCGTCGCCAACCGCTTCATCGGCGAGGGGCTTTCCTCAGGGGTCATCGTCACCACCAA
AGGGCGCGAGGCAGCGATGGATAGAAGCCTTACCGCGACCGTCGGCGACAAGGAGCCCCGCTACCCGATCGTGGTGCTCA
TAAACGGCGGCAGCGCCAGCGCCTCCGAGATCGTCGCCGGAGCGCTGCAGGACCACAAGAGGGCCGTCATCATGGGGACC
CAGAGCTTTGGCAAAGGAAGCGTCCAGTCGGTGATGACGCTCGACAACGGCGACGGCCTGAAGTTGACCACAGCCCGCTA
CTACACCCCCAGCGGGCGCTCCATCCAGGCCAAGGGAATCACCCCCGACATCGTGGTGGAGTTTGCCAAGCCCGCCCCCG
CTAAAGACAAGCAAAAGGATGCAAAGGAATTGGAGATCCGCGAGCAGGATCTGGACGGGCACATGGACCAGGCTCCGGCG
CCGCCGCGCCCGGCGTCCCCCGCGAAACCGCATTCGGCGCCCCCCGCGAAACCGCAGCAAAAGCCGAGCAGCAAGGAGTT
GAAAGAGCAGGACCTCCTTAAAGCCGACAACCAACTGGCCCGGGCGCTCGACCTTCTGAAGGGGGTCAACCTGCTGAAAG
CGAGCGGCCGGCGTTGA

Upstream 100 bases:

>100_bases
CCCTCCATCCCCCCAATAGCAGTTGACATCTTTCTCGGCAGAAATTACATTAGCAGGCCGCCCAACTATCCACGCGATTT
TACAGATAAAGGCTCTACCG

Downstream 100 bases:

>100_bases
CGGACGAGACGGAGACACCCGAGCGCATCCCGAACCTGCTGGTAATTCTCGGTGCGACCGCCTCAGGCAAGACGAGGCTC
GGGGTGCAACTCGCCGGCAG

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSKKVFAAFAVIFLLLSLVLMLPLMDREERAKRSEAEYLEMFRDVVNIVKQSYVDKVDDKKLMAVAINGMLATLDPHSNY
LPATDYTEMKVHMAGAFGGLGIELEMRNGKLMVNAPIEDTPAFRAGIQSGDHIWTIDGKPTADLNINQCVSRMRGTPGTS
VTLGILREGKSSPLTFRLVRAIIKTKSLKGRLLEPGYGYIRIGEFQERTGEDFEKALKTLAADNGQPLSGLVLDLRFNPG
GLVDQACRVANRFIGEGLSSGVIVTTKGREAAMDRSLTATVGDKEPRYPIVVLINGGSASASEIVAGALQDHKRAVIMGT
QSFGKGSVQSVMTLDNGDGLKLTTARYYTPSGRSIQAKGITPDIVVEFAKPAPAKDKQKDAKELEIREQDLDGHMDQAPA
PPRPASPAKPHSAPPAKPQQKPSSKELKEQDLLKADNQLARALDLLKGVNLLKASGRR

Sequences:

>Translated_458_residues
MSKKVFAAFAVIFLLLSLVLMLPLMDREERAKRSEAEYLEMFRDVVNIVKQSYVDKVDDKKLMAVAINGMLATLDPHSNY
LPATDYTEMKVHMAGAFGGLGIELEMRNGKLMVNAPIEDTPAFRAGIQSGDHIWTIDGKPTADLNINQCVSRMRGTPGTS
VTLGILREGKSSPLTFRLVRAIIKTKSLKGRLLEPGYGYIRIGEFQERTGEDFEKALKTLAADNGQPLSGLVLDLRFNPG
GLVDQACRVANRFIGEGLSSGVIVTTKGREAAMDRSLTATVGDKEPRYPIVVLINGGSASASEIVAGALQDHKRAVIMGT
QSFGKGSVQSVMTLDNGDGLKLTTARYYTPSGRSIQAKGITPDIVVEFAKPAPAKDKQKDAKELEIREQDLDGHMDQAPA
PPRPASPAKPHSAPPAKPQQKPSSKELKEQDLLKADNQLARALDLLKGVNLLKASGRR
>Mature_457_residues
SKKVFAAFAVIFLLLSLVLMLPLMDREERAKRSEAEYLEMFRDVVNIVKQSYVDKVDDKKLMAVAINGMLATLDPHSNYL
PATDYTEMKVHMAGAFGGLGIELEMRNGKLMVNAPIEDTPAFRAGIQSGDHIWTIDGKPTADLNINQCVSRMRGTPGTSV
TLGILREGKSSPLTFRLVRAIIKTKSLKGRLLEPGYGYIRIGEFQERTGEDFEKALKTLAADNGQPLSGLVLDLRFNPGG
LVDQACRVANRFIGEGLSSGVIVTTKGREAAMDRSLTATVGDKEPRYPIVVLINGGSASASEIVAGALQDHKRAVIMGTQ
SFGKGSVQSVMTLDNGDGLKLTTARYYTPSGRSIQAKGITPDIVVEFAKPAPAKDKQKDAKELEIREQDLDGHMDQAPAP
PRPASPAKPHSAPPAKPQQKPSSKELKEQDLLKADNQLARALDLLKGVNLLKASGRR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=335, Percent_Identity=28.3582089552239, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49673; Mature: 49542

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKVFAAFAVIFLLLSLVLMLPLMDREERAKRSEAEYLEMFRDVVNIVKQSYVDKVDDK
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLMAVAINGMLATLDPHSNYLPATDYTEMKVHMAGAFGGLGIELEMRNGKLMVNAPIEDT
EEEEEEECCEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCC
PAFRAGIQSGDHIWTIDGKPTADLNINQCVSRMRGTPGTSVTLGILREGKSSPLTFRLVR
CHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
AIIKTKSLKGRLLEPGYGYIRIGEFQERTGEDFEKALKTLAADNGQPLSGLVLDLRFNPG
HHHHHHCCCCCEECCCCCEEEECCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
GLVDQACRVANRFIGEGLSSGVIVTTKGREAAMDRSLTATVGDKEPRYPIVVLINGGSAS
CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCEEEEECCCCCCCCEEEEECCCCCC
ASEIVAGALQDHKRAVIMGTQSFGKGSVQSVMTLDNGDGLKLTTARYYTPSGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEECCC
TPDIVVEFAKPAPAKDKQKDAKELEIREQDLDGHMDQAPAPPRPASPAKPHSAPPAKPQQ
CHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPSSKELKEQDLLKADNQLARALDLLKGVNLLKASGRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure 
SKKVFAAFAVIFLLLSLVLMLPLMDREERAKRSEAEYLEMFRDVVNIVKQSYVDKVDDK
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLMAVAINGMLATLDPHSNYLPATDYTEMKVHMAGAFGGLGIELEMRNGKLMVNAPIEDT
EEEEEEECCEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCC
PAFRAGIQSGDHIWTIDGKPTADLNINQCVSRMRGTPGTSVTLGILREGKSSPLTFRLVR
CHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH
AIIKTKSLKGRLLEPGYGYIRIGEFQERTGEDFEKALKTLAADNGQPLSGLVLDLRFNPG
HHHHHHCCCCCEECCCCCEEEECCHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCC
GLVDQACRVANRFIGEGLSSGVIVTTKGREAAMDRSLTATVGDKEPRYPIVVLINGGSAS
CHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCEEEEECCCCCCCCEEEEECCCCCC
ASEIVAGALQDHKRAVIMGTQSFGKGSVQSVMTLDNGDGLKLTTARYYTPSGRSIQAKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEEECCC
TPDIVVEFAKPAPAKDKQKDAKELEIREQDLDGHMDQAPAPPRPASPAKPHSAPPAKPQQ
CHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPSSKELKEQDLLKADNQLARALDLLKGVNLLKASGRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]