Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118019

Identifier: 197118019

GI number: 197118019

Start: 1895107

End: 1895781

Strand: Reverse

Name: 197118019

Synonym: Gbem_1632

Alternate gene names: NA

Gene position: 1895781-1895107 (Counterclockwise)

Preceding gene: 197118030

Following gene: 308535255

Centisome position: 41.08

GC content: 54.67

Gene sequence:

>675_bases
ATGACACTACCGGAACTACTGGAACTCAACTTCAACGGCCACAGCATCAACGACTTCATCGCGGAAGTAAACACCATAGC
CGACAAAACGGAGAAGCACCCGGCCCTTAAGGACTTTCCCGAATACTTCACCCCACCGGAGAAGCTCAGGGAAAAAGCGG
TGCTACTGGTGCAACTTCGCGATGCCTCCGCCAGCGGCGACAGGGATAAGAAGGCGGAGAAAATGGCCGCCTGGGAAGAC
ACCAAACTTGCCGTGATCATGAACGGTAAGCACATCACCATGCTGTCGTTGCACCGCAACGACCCCAGCATCCTGCTTAA
CACGGGCTACAAGTTGAAACAGAAGCACATTGCTAAACCCACCTCCTCCTCTTCCACGGACCTGCTGGCGGAGACGCCGG
GCCTCGAGTTGAGGTACATGCAATCGGGTTCGGGGCCAATAGTGGGTGCCTTCACCGTCATCATAACCAAGGCTAAGAAC
AGGGCGTCCACAGAGCTGCAGATGTCTGACAACCCTTCTGACGAATCTTCCTGGAATAGCCAAGGGATCTATGCCAAATC
GCGCATAGAGTACAAAGGGCAACCATCGGAAAAACGTGTCTACTTCAGGGCCAGGTACCACCAGGACGGCGGCGTCAGTC
CATGGTCCCCGGTTGTAAACATCCTCGTTCTGTAA

Upstream 100 bases:

>100_bases
CGTGAGAAAATTTTAAAAAAAATTACCATGGCCGCTGTACACGTCGTTAACCGGTGCTAAGATTCCACCCGCTACGGAAA
TCGCGTAAAGGAGGTTTCGA

Downstream 100 bases:

>100_bases
AAAGTCCGCCTCTTTAACAAGATGAAACGACGACGCGGCTGCATCTTACAATCCAGCCGCGTTTTCTTTTGCCCCGGCTT
TAGCCTTCCGCCTTGCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWED
TKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKN
RASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL

Sequences:

>Translated_224_residues
MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWED
TKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKN
RASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL
>Mature_223_residues
TLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLRDASASGDRDKKAEKMAAWEDT
KLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKPTSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNR
ASTELQMSDNPSDESSWNSQGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25029; Mature: 24898

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLR
CCCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCEEEEEEEE
DASASGDRDKKAEKMAAWEDTKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKP
CCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCCEEHHHHCCCC
TSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNRASTELQMSDNPSDESSWNS
CCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCC
QGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL
CCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEC
>Mature Secondary Structure 
TLPELLELNFNGHSINDFIAEVNTIADKTEKHPALKDFPEYFTPPEKLREKAVLLVQLR
CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCEEEEEEEE
DASASGDRDKKAEKMAAWEDTKLAVIMNGKHITMLSLHRNDPSILLNTGYKLKQKHIAKP
CCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCCEEHHHHCCCC
TSSSSTDLLAETPGLELRYMQSGSGPIVGAFTVIITKAKNRASTELQMSDNPSDESSWNS
CCCCCCCEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCC
QGIYAKSRIEYKGQPSEKRVYFRARYHQDGGVSPWSPVVNILVL
CCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA