Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118015

Identifier: 197118015

GI number: 197118015

Start: 1889295

End: 1891067

Strand: Reverse

Name: 197118015

Synonym: Gbem_1628

Alternate gene names: NA

Gene position: 1891067-1889295 (Counterclockwise)

Preceding gene: 197118016

Following gene: 197118014

Centisome position: 40.98

GC content: 59.17

Gene sequence:

>1773_bases
ATGAGTAAGACGATTTTTCTCGGCATCGACGGCATGGACCCCAAGATTGCCGAGCAACTGATGAGTGCAGGCCAGCTCCC
CAACTTCGAGCGGCTCGCAGCCCGCGGCCACTACAGCCAGCTTGCAACTATTAACCCGCCGCAGTCTCCGGTCGTCTGGT
CCACCATCGCCACCGGCCTTGCCCCCAGCGGCCACGGCATCTACGACTTCATCCATCGCGATCCTGCCACGTACAAGCCT
TACCTCTCGCTGCACCGTATTGAGCACGGCAGATACGTCAATCCCGTGCAGGGGGAAACCTTCTGGGAAAAATGTGCCGC
AAAAGGAATCGGGTCCACCCTTCTCAAATGGCCCATGGGGTTTCCCCCCCGCCCCTTCCCTGGGCAGATGCTCGCGGGGC
TCGGAGCACCGGACCTCCGGGGAATGCTCGGCACCTACACCTGCTATACCTCCGCTCCGGAAAAGATGGAGCGCGATGCA
AAAGGACGTATTGTTCCTGTACCAGGTAGTGCCCAATCCGTCCAGACCGACATCACCGGTCCTTTCACGGTGGGACTCAC
CGGGAGAAAGGCCACCACGATACCGCTTAACATCCAGCTCGACGCGAACTCGGTCACCTGCCGGATCGGACGCCAGAGCT
TCACCCTTGCGCCTGGTCAGTGGAGCCCCTGGCTCACCATAGTCTTCGACATCGGGTTTTTTAGGACCGTAAAGGGAATC
TGCCGGTTCTACCTCTCAGGGCTACACCCGGAGTTCTCCCTCTACATGACGCCAGTAAACGTCGCCTTCGACAGCTCCGA
ATTCCCTATTTCACACCCGGCCGATTACGCGGTCGAACTGGCAGACGCCATCGGGCCCTTCTCCACGTTAGGGTTAGCTG
AGGACACCAATGCGGTTAACGACGGCGCGCTCGACGAGGACGGTTTCATCTCCTTATGCGATGGTATCATGGCAGAACGC
GAGTCGATGTTCTTGTATGAGTTGTCCCGCTTCCGCGAAGGACTCCTCGCCTGCGTCTTCGATACCACCGACCGTATCCA
GCATATCTTCTGGCGCATGCATGACACAGGACACCCTATGCACGACCCAGCCCTTGCCGAGAGCTACAATGATGTCATCC
CGCGCTACTACCGTTGGATGGATCGCATACTGGGGGTGGTCCTTGATCGCGCGCCCGACGCGGCGCTTATCTGCTGCTCC
GACCACGGTTTCTGCAGCTTTCGCCGTTCGGTCCAGGTCAACGACTGGCTGCTGCGGGAGGGATTCCTGGCCCTAAAACC
TGGTGCCAAGCTATGCGAGGGGCTCTTCGAGGAAATTGACTGGTCCAGGAGCCAGGCCTATGCAGCCGGGCTGAACAGCA
TTTATCTCAACCTGCGCGGACGCGAGAAAGAAGGGATCCTCAACGAGAGTGAGCTACCGGCATTGAAAAGCAAACTGGCT
GCAAGGCTCGCCTCCTTGTACGATCGCGGGAGGCCTGTTGTCTGCCGGGTACACGATGCCGAGCTACTGAAAGGGGACAA
CCCTCATGCGGCCGCCGGCGGGCCGGATCTTGTAGTAGGTTTTGCGGAAGGGTACCGCGCCTCCTGGCAAACCGCCATTG
GTGGCATAACCGGGGGCGAGATCATCGAGGACAACCTGAAGAAATGGAGTGGCGACCACTGCTGCGACGCAAGCCTAGTC
CCAGGTGTTCTTTTCACAAACGCCCCCACCACCGGCTACATGTCGTCCGTTAATGAAATCGGGAACATGCTGGCGGAACT
GACCCAAAGGTAG

Upstream 100 bases:

>100_bases
CCGAAGTAGACCTGGCAGGTGACCACCCTGGTCTCATCCCTGAAACAGGCCGCTTTGTCATTGAACGAGAAGGCATTCCG
GCAGGAGCAGGTATTTTTCG

Downstream 100 bases:

>100_bases
CCAATGCCACTCGACAGCCACCCCGATCACCCCACCACACTTCGCGACAGGTTATTATACGTTTTCAAGCTCTGGAGTTG
TTTTCTGAGCTTGGTCTACC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein Involved In Mitomycin Biosynthesis; Phosphodiesterase/Nucleotide Pyrophosphatase

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MSKTIFLGIDGMDPKIAEQLMSAGQLPNFERLAARGHYSQLATINPPQSPVVWSTIATGLAPSGHGIYDFIHRDPATYKP
YLSLHRIEHGRYVNPVQGETFWEKCAAKGIGSTLLKWPMGFPPRPFPGQMLAGLGAPDLRGMLGTYTCYTSAPEKMERDA
KGRIVPVPGSAQSVQTDITGPFTVGLTGRKATTIPLNIQLDANSVTCRIGRQSFTLAPGQWSPWLTIVFDIGFFRTVKGI
CRFYLSGLHPEFSLYMTPVNVAFDSSEFPISHPADYAVELADAIGPFSTLGLAEDTNAVNDGALDEDGFISLCDGIMAER
ESMFLYELSRFREGLLACVFDTTDRIQHIFWRMHDTGHPMHDPALAESYNDVIPRYYRWMDRILGVVLDRAPDAALICCS
DHGFCSFRRSVQVNDWLLREGFLALKPGAKLCEGLFEEIDWSRSQAYAAGLNSIYLNLRGREKEGILNESELPALKSKLA
ARLASLYDRGRPVVCRVHDAELLKGDNPHAAAGGPDLVVGFAEGYRASWQTAIGGITGGEIIEDNLKKWSGDHCCDASLV
PGVLFTNAPTTGYMSSVNEIGNMLAELTQR

Sequences:

>Translated_590_residues
MSKTIFLGIDGMDPKIAEQLMSAGQLPNFERLAARGHYSQLATINPPQSPVVWSTIATGLAPSGHGIYDFIHRDPATYKP
YLSLHRIEHGRYVNPVQGETFWEKCAAKGIGSTLLKWPMGFPPRPFPGQMLAGLGAPDLRGMLGTYTCYTSAPEKMERDA
KGRIVPVPGSAQSVQTDITGPFTVGLTGRKATTIPLNIQLDANSVTCRIGRQSFTLAPGQWSPWLTIVFDIGFFRTVKGI
CRFYLSGLHPEFSLYMTPVNVAFDSSEFPISHPADYAVELADAIGPFSTLGLAEDTNAVNDGALDEDGFISLCDGIMAER
ESMFLYELSRFREGLLACVFDTTDRIQHIFWRMHDTGHPMHDPALAESYNDVIPRYYRWMDRILGVVLDRAPDAALICCS
DHGFCSFRRSVQVNDWLLREGFLALKPGAKLCEGLFEEIDWSRSQAYAAGLNSIYLNLRGREKEGILNESELPALKSKLA
ARLASLYDRGRPVVCRVHDAELLKGDNPHAAAGGPDLVVGFAEGYRASWQTAIGGITGGEIIEDNLKKWSGDHCCDASLV
PGVLFTNAPTTGYMSSVNEIGNMLAELTQR
>Mature_589_residues
SKTIFLGIDGMDPKIAEQLMSAGQLPNFERLAARGHYSQLATINPPQSPVVWSTIATGLAPSGHGIYDFIHRDPATYKPY
LSLHRIEHGRYVNPVQGETFWEKCAAKGIGSTLLKWPMGFPPRPFPGQMLAGLGAPDLRGMLGTYTCYTSAPEKMERDAK
GRIVPVPGSAQSVQTDITGPFTVGLTGRKATTIPLNIQLDANSVTCRIGRQSFTLAPGQWSPWLTIVFDIGFFRTVKGIC
RFYLSGLHPEFSLYMTPVNVAFDSSEFPISHPADYAVELADAIGPFSTLGLAEDTNAVNDGALDEDGFISLCDGIMAERE
SMFLYELSRFREGLLACVFDTTDRIQHIFWRMHDTGHPMHDPALAESYNDVIPRYYRWMDRILGVVLDRAPDAALICCSD
HGFCSFRRSVQVNDWLLREGFLALKPGAKLCEGLFEEIDWSRSQAYAAGLNSIYLNLRGREKEGILNESELPALKSKLAA
RLASLYDRGRPVVCRVHDAELLKGDNPHAAAGGPDLVVGFAEGYRASWQTAIGGITGGEIIEDNLKKWSGDHCCDASLVP
GVLFTNAPTTGYMSSVNEIGNMLAELTQR

Specific function: Unknown

COG id: COG3379

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64827; Mature: 64695

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTIFLGIDGMDPKIAEQLMSAGQLPNFERLAARGHYSQLATINPPQSPVVWSTIATGL
CCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHEEECCCCCCCEEHHHHHHCC
APSGHGIYDFIHRDPATYKPYLSLHRIEHGRYVNPVQGETFWEKCAAKGIGSTLLKWPMG
CCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCC
FPPRPFPGQMLAGLGAPDLRGMLGTYTCYTSAPEKMERDAKGRIVPVPGSAQSVQTDITG
CCCCCCCHHHHHCCCCCHHHHHHHHEEEECCCHHHHHHCCCCCEEECCCCCHHCEECCCC
PFTVGLTGRKATTIPLNIQLDANSVTCRIGRQSFTLAPGQWSPWLTIVFDIGFFRTVKGI
CEEEEECCCEEEEEEEEEEECCCCEEEEECCCEEEECCCCCCCCEEEEEHHHHHHHHHHH
CRFYLSGLHPEFSLYMTPVNVAFDSSEFPISHPADYAVELADAIGPFSTLGLAEDTNAVN
HHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCC
DGALDEDGFISLCDGIMAERESMFLYELSRFREGLLACVFDTTDRIQHIFWRMHDTGHPM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCC
HDPALAESYNDVIPRYYRWMDRILGVVLDRAPDAALICCSDHGFCSFRRSVQVNDWLLRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCHHHHHC
GFLALKPGAKLCEGLFEEIDWSRSQAYAAGLNSIYLNLRGREKEGILNESELPALKSKLA
CCEEECCCHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
ARLASLYDRGRPVVCRVHDAELLKGDNPHAAAGGPDLVVGFAEGYRASWQTAIGGITGGE
HHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCH
IIEDNLKKWSGDHCCDASLVPGVLFTNAPTTGYMSSVNEIGNMLAELTQR
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKTIFLGIDGMDPKIAEQLMSAGQLPNFERLAARGHYSQLATINPPQSPVVWSTIATGL
CCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHEEECCCCCCCEEHHHHHHCC
APSGHGIYDFIHRDPATYKPYLSLHRIEHGRYVNPVQGETFWEKCAAKGIGSTLLKWPMG
CCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCC
FPPRPFPGQMLAGLGAPDLRGMLGTYTCYTSAPEKMERDAKGRIVPVPGSAQSVQTDITG
CCCCCCCHHHHHCCCCCHHHHHHHHEEEECCCHHHHHHCCCCCEEECCCCCHHCEECCCC
PFTVGLTGRKATTIPLNIQLDANSVTCRIGRQSFTLAPGQWSPWLTIVFDIGFFRTVKGI
CEEEEECCCEEEEEEEEEEECCCCEEEEECCCEEEECCCCCCCCEEEEEHHHHHHHHHHH
CRFYLSGLHPEFSLYMTPVNVAFDSSEFPISHPADYAVELADAIGPFSTLGLAEDTNAVN
HHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCC
DGALDEDGFISLCDGIMAERESMFLYELSRFREGLLACVFDTTDRIQHIFWRMHDTGHPM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCC
HDPALAESYNDVIPRYYRWMDRILGVVLDRAPDAALICCSDHGFCSFRRSVQVNDWLLRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCCCCHHHHHC
GFLALKPGAKLCEGLFEEIDWSRSQAYAAGLNSIYLNLRGREKEGILNESELPALKSKLA
CCEEECCCHHHHHHHHHHCCCCHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH
ARLASLYDRGRPVVCRVHDAELLKGDNPHAAAGGPDLVVGFAEGYRASWQTAIGGITGGE
HHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCH
IIEDNLKKWSGDHCCDASLVPGVLFTNAPTTGYMSSVNEIGNMLAELTQR
HHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA