| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118014
Identifier: 197118014
GI number: 197118014
Start: 1887318
End: 1889291
Strand: Reverse
Name: 197118014
Synonym: Gbem_1627
Alternate gene names: NA
Gene position: 1889291-1887318 (Counterclockwise)
Preceding gene: 197118015
Following gene: 197117972
Centisome position: 40.94
GC content: 56.99
Gene sequence:
>1974_bases ATGCCACTCGACAGCCACCCCGATCACCCCACCACACTTCGCGACAGGTTATTATACGTTTTCAAGCTCTGGAGTTGTTT TCTGAGCTTGGTCTACCTGCCGCTCGACCTCATCTTCCGCCTGGATTCCTTCCTTCTCTCCAGGCCCGTTTCCTATGTCG TAGTAAGTAGCGCAACACTGCTGTTGCTCATGGTGCTCCTGTCCGTGGTGATTGCCGGTGCTTACTTCCCTTGGGCCGTC CTCGCAGGAGTGGTCCGAAGAGGGAGGGATCCTCACCGCGACAATGCCAAGCTCACTCACTTCCTGCTTGTTTTCCTGGG CTGCATGCTGTTCGCGAAGCTCTTTAAGCTCTGGCTGGCGAAGATAGGTCACCCAGTCTCGCTACGTGCCATTTATATTG GACTCGCACTTTTCCTGGCGATCTGTTGGGCAAACCGGCAGGTCTTTCACCAGAGGATCCGCTATCTCGTACTGTCGCTG TCGGGTCCCCGGTTCCTCCCCTCCCTTTGCGCCATCACATTTGCCATCACCCTTGGACATGCGATTAACGGTGGGCCACA ACCCTCGGGGAAGCTCCAACGATCCCACTCCGCCGCCAGAACCGGGACTCCCAACATCATCCTGATTACCTTCGATGCTC TGTCGGCAGAGGATATGTCGCTCTATGGCTACCACTTGAAGACCACTCCCAGCATGGACGCCTTCGCCAGGGAATGCTAC GTCTTTGAGAGTGTCATCGCCACCTCCAACTGGACCAGACCGACCGCTGCATCGCTTATGACGGGGGAGTATCCGGACCG CCATAGGTTGATCAACATCGGAAGCCACGACAACGTTATTGCTGCCCCGGACGAATCGCTCCCAGCCTATCTGAGAGATA GCGGGATGCGGACCGCCGCGGTGATCGCCAACGGTGGATATGCCCACCCCTACGCTATCGGCCTCGCCGATCAATTCGAC CACAAACCCTTCCTCGCGCCGGATCAGCAGAGGCTCCCATACTTCAACCCTTTGCTCATGTTCCATCCGGAGTACTCATA CCTTGGAGAACACTACTTCAAAAATGGTGCGGCTCTGTGGCTTGGAGAAATCCTAAGCGAACTTGTCGGCCAGTTGGACA ACTTCTGCCGACATACCGTGACCATCTTTCCGCCGGAGATGGTCTTTCGGCATGGGGAACGGTACCTTAATTCCCATCGG GAAAAGCCGATGTTCCTCTGGCTTCACTCATTCGCCCCGCATGCAGCCTACTTACCGCCCCCTCCCCAGAAAGGGACCTT CCTCCCCGGCAACGGGTTGGCAGACAACGTGACCCAAGGCGCGTTCCTTGGGGCCTACCCAGATTCGAAACAAGGAACTG TAGACCAACTGCGCCTGCGTTACGACGAGCACATACTCTACGCTGACTATGCCCTTGGCAAGCACTTAAGATTCCTGAGG GACTCCGGCCGAATGGAAGACTCCATCATAATAATCTCGGCAGACCATGGCGAATCCTTCGCTGGGGGTTACCAGGGGCA TGGCGGGCCCCTCCTCTCCCAGCCGCTGGTACACATCCCGTTGCTGATCCACCTGCCGGGTCAAACGAGCGGCAAGAGAA TAACGGGCACCGCATCACAAGTCGATATAGCTCCCACGGTAGTGGAGCTACTAGGGGGCAAGATTCCTCGCTGGATGGAA GGTAAAAGCCTGAAGGGGGCGCTGACGGGCGGGAGCATCCCAACGCAGCCGGTATTCTGCATGAATTTAGATGGCAATCG GACCCACGGGAAGCTCACCAAAGGGAATATTGCAGTGCTGTTTGAAGGTTACAAGTATGTCCAAGACATAGGGGGCGGTC CTGGAAGGCTATACGATCTTCGGTCGGGCCAGTCCGAGATTGTCGATCTTGCAGACAGGGAAAGGGCACGCGCGGGCGCG ATGCGCCGGCTCGTGCTGGATAGGTTCGGAAGCAGCGGTAGCCTTTCCGAGTAG
Upstream 100 bases:
>100_bases AGTCCCAGGTGTTCTTTTCACAAACGCCCCCACCACCGGCTACATGTCGTCCGTTAATGAAATCGGGAACATGCTGGCGG AACTGACCCAAAGGTAGCCA
Downstream 100 bases:
>100_bases ACGAGGGCAAACAAGAAACCTGAGTGCCCGATTGGCAATCGAGGCTTCCCTGGCTTTTCCCATGTGGTGTTCAACCTCAG GCAGTAACTATGGAGTTAGT
Product: sulfatase
Products: NA
Alternate protein names: Arylsulfatase A Family Protein; AryLSUlfatase A Family Protein
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MPLDSHPDHPTTLRDRLLYVFKLWSCFLSLVYLPLDLIFRLDSFLLSRPVSYVVVSSATLLLLMVLLSVVIAGAYFPWAV LAGVVRRGRDPHRDNAKLTHFLLVFLGCMLFAKLFKLWLAKIGHPVSLRAIYIGLALFLAICWANRQVFHQRIRYLVLSL SGPRFLPSLCAITFAITLGHAINGGPQPSGKLQRSHSAARTGTPNIILITFDALSAEDMSLYGYHLKTTPSMDAFARECY VFESVIATSNWTRPTAASLMTGEYPDRHRLINIGSHDNVIAAPDESLPAYLRDSGMRTAAVIANGGYAHPYAIGLADQFD HKPFLAPDQQRLPYFNPLLMFHPEYSYLGEHYFKNGAALWLGEILSELVGQLDNFCRHTVTIFPPEMVFRHGERYLNSHR EKPMFLWLHSFAPHAAYLPPPPQKGTFLPGNGLADNVTQGAFLGAYPDSKQGTVDQLRLRYDEHILYADYALGKHLRFLR DSGRMEDSIIIISADHGESFAGGYQGHGGPLLSQPLVHIPLLIHLPGQTSGKRITGTASQVDIAPTVVELLGGKIPRWME GKSLKGALTGGSIPTQPVFCMNLDGNRTHGKLTKGNIAVLFEGYKYVQDIGGGPGRLYDLRSGQSEIVDLADRERARAGA MRRLVLDRFGSSGSLSE
Sequences:
>Translated_657_residues MPLDSHPDHPTTLRDRLLYVFKLWSCFLSLVYLPLDLIFRLDSFLLSRPVSYVVVSSATLLLLMVLLSVVIAGAYFPWAV LAGVVRRGRDPHRDNAKLTHFLLVFLGCMLFAKLFKLWLAKIGHPVSLRAIYIGLALFLAICWANRQVFHQRIRYLVLSL SGPRFLPSLCAITFAITLGHAINGGPQPSGKLQRSHSAARTGTPNIILITFDALSAEDMSLYGYHLKTTPSMDAFARECY VFESVIATSNWTRPTAASLMTGEYPDRHRLINIGSHDNVIAAPDESLPAYLRDSGMRTAAVIANGGYAHPYAIGLADQFD HKPFLAPDQQRLPYFNPLLMFHPEYSYLGEHYFKNGAALWLGEILSELVGQLDNFCRHTVTIFPPEMVFRHGERYLNSHR EKPMFLWLHSFAPHAAYLPPPPQKGTFLPGNGLADNVTQGAFLGAYPDSKQGTVDQLRLRYDEHILYADYALGKHLRFLR DSGRMEDSIIIISADHGESFAGGYQGHGGPLLSQPLVHIPLLIHLPGQTSGKRITGTASQVDIAPTVVELLGGKIPRWME GKSLKGALTGGSIPTQPVFCMNLDGNRTHGKLTKGNIAVLFEGYKYVQDIGGGPGRLYDLRSGQSEIVDLADRERARAGA MRRLVLDRFGSSGSLSE >Mature_656_residues PLDSHPDHPTTLRDRLLYVFKLWSCFLSLVYLPLDLIFRLDSFLLSRPVSYVVVSSATLLLLMVLLSVVIAGAYFPWAVL AGVVRRGRDPHRDNAKLTHFLLVFLGCMLFAKLFKLWLAKIGHPVSLRAIYIGLALFLAICWANRQVFHQRIRYLVLSLS GPRFLPSLCAITFAITLGHAINGGPQPSGKLQRSHSAARTGTPNIILITFDALSAEDMSLYGYHLKTTPSMDAFARECYV FESVIATSNWTRPTAASLMTGEYPDRHRLINIGSHDNVIAAPDESLPAYLRDSGMRTAAVIANGGYAHPYAIGLADQFDH KPFLAPDQQRLPYFNPLLMFHPEYSYLGEHYFKNGAALWLGEILSELVGQLDNFCRHTVTIFPPEMVFRHGERYLNSHRE KPMFLWLHSFAPHAAYLPPPPQKGTFLPGNGLADNVTQGAFLGAYPDSKQGTVDQLRLRYDEHILYADYALGKHLRFLRD SGRMEDSIIIISADHGESFAGGYQGHGGPLLSQPLVHIPLLIHLPGQTSGKRITGTASQVDIAPTVVELLGGKIPRWMEG KSLKGALTGGSIPTQPVFCMNLDGNRTHGKLTKGNIAVLFEGYKYVQDIGGGPGRLYDLRSGQSEIVDLADRERARAGAM RRLVLDRFGSSGSLSE
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72786; Mature: 72655
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDSHPDHPTTLRDRLLYVFKLWSCFLSLVYLPLDLIFRLDSFLLSRPVSYVVVSSATL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLLMVLLSVVIAGAYFPWAVLAGVVRRGRDPHRDNAKLTHFLLVFLGCMLFAKLFKLWLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KIGHPVSLRAIYIGLALFLAICWANRQVFHQRIRYLVLSLSGPRFLPSLCAITFAITLGH HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH AINGGPQPSGKLQRSHSAARTGTPNIILITFDALSAEDMSLYGYHLKTTPSMDAFARECY HCCCCCCCCCHHHHHCCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHH VFESVIATSNWTRPTAASLMTGEYPDRHRLINIGSHDNVIAAPDESLPAYLRDSGMRTAA HHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHCCCCEEE VIANGGYAHPYAIGLADQFDHKPFLAPDQQRLPYFNPLLMFHPEYSYLGEHYFKNGAALW EEECCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHH LGEILSELVGQLDNFCRHTVTIFPPEMVFRHGERYLNSHREKPMFLWLHSFAPHAAYLPP HHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC PPQKGTFLPGNGLADNVTQGAFLGAYPDSKQGTVDQLRLRYDEHILYADYALGKHLRFLR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHH DSGRMEDSIIIISADHGESFAGGYQGHGGPLLSQPLVHIPLLIHLPGQTSGKRITGTASQ HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEECCCCC VDIAPTVVELLGGKIPRWMEGKSLKGALTGGSIPTQPVFCMNLDGNRTHGKLTKGNIAVL CCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEECCCEEEE FEGYKYVQDIGGGPGRLYDLRSGQSEIVDLADRERARAGAMRRLVLDRFGSSGSLSE ECCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PLDSHPDHPTTLRDRLLYVFKLWSCFLSLVYLPLDLIFRLDSFLLSRPVSYVVVSSATL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LLLMVLLSVVIAGAYFPWAVLAGVVRRGRDPHRDNAKLTHFLLVFLGCMLFAKLFKLWLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KIGHPVSLRAIYIGLALFLAICWANRQVFHQRIRYLVLSLSGPRFLPSLCAITFAITLGH HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH AINGGPQPSGKLQRSHSAARTGTPNIILITFDALSAEDMSLYGYHLKTTPSMDAFARECY HCCCCCCCCCHHHHHCCHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHH VFESVIATSNWTRPTAASLMTGEYPDRHRLINIGSHDNVIAAPDESLPAYLRDSGMRTAA HHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHCCCCEEE VIANGGYAHPYAIGLADQFDHKPFLAPDQQRLPYFNPLLMFHPEYSYLGEHYFKNGAALW EEECCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHH LGEILSELVGQLDNFCRHTVTIFPPEMVFRHGERYLNSHREKPMFLWLHSFAPHAAYLPP HHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC PPQKGTFLPGNGLADNVTQGAFLGAYPDSKQGTVDQLRLRYDEHILYADYALGKHLRFLR CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHH DSGRMEDSIIIISADHGESFAGGYQGHGGPLLSQPLVHIPLLIHLPGQTSGKRITGTASQ HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCEEECCCCC VDIAPTVVELLGGKIPRWMEGKSLKGALTGGSIPTQPVFCMNLDGNRTHGKLTKGNIAVL CCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEECCCEEEE FEGYKYVQDIGGGPGRLYDLRSGQSEIVDLADRERARAGAMRRLVLDRFGSSGSLSE ECCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA