| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is wzc [H]
Identifier: 197117992
GI number: 197117992
Start: 1862811
End: 1863998
Strand: Direct
Name: wzc [H]
Synonym: Gbem_1605
Alternate gene names: 197117992
Gene position: 1862811-1863998 (Clockwise)
Preceding gene: 197117991
Following gene: 197117993
Centisome position: 40.36
GC content: 52.86
Gene sequence:
>1188_bases ATGACAGAGAACCAGAATCAGGCTGACATTGATGTAGAGGAACAGATTAATCTGCTCGAACTTTTACAGATTATCGCGAA ACGAAAGATGTTTATCATCAAGATGTGCACATTCGCGGTCGTCGCATCTGTTGCTTACAGCTTCACTCTCCCCAATATCT ATTCCGCAACTGCCAAGGTGTTGCCGCCACAGAAAGAAACGGCCGGCGGGCTTTCTGCAATGTTGGGACAGGTCGGTGGC ATAGCTGGTCTCGCACCGGGTGGCCTTGGTTCTGGTACCGAACTCTACCTTGGCCTTCTGAGAAGTAGATCTGTGGCGGA CGAGGTTGTGCGGCGTCTTGACCTTACTGCATATTATAAAACCAAGGATGCCGAATTGGCTAGGAGAGGCCTAGAAGCGA CCGTGCGTATGCAGACCGGCAAGGACGGTATCATTAACATCACGGCCGATGATAAGGATCCGAAGATGGCGGCTCGCGTC GCAAACATGTATGTTGAGGAGCTTGGCAGGACTTCGGTGAGGCTTAACCTATCCAAGGCAGGCTCTGAAAGAGCATTTCT CGAAAAACGGCTGGAATTGGTAAAGGGAGAACTGAAGAAGGCTGAAGATGAAATCAAAGCATTCTCCCAGCAAAACAGCA TAGTACAGGTTGACTCGCAGGCCAAGGCAAGCATCGAAGGGATAGCACGGCTAAAGGCTGAACTGGCGACTAAGGAAGTT CAGTTGGCAGCACTGCGCTCCAGGCAGACAGACGAGAGCCCAGAGGTGCGCTCACTCCTGGCGGGGATCAAGCGCCTGCA GGCCGAGATGGATAGGATGTCAGGTCCCGGTCTAGGTGGCGAGGGTATTCCGGCGATAGGCAATGTTCCTAGGCTGGGGC TCGAGTATGCCCGGAAGATGCGTGAGCTCAAGATACAGGAATCTGTCTTTGAGCAACTCACCAAGCAATATGAGATGGCC AAGCTCAGCGAGGCGAAGGATTCTTCAGCGTTCCAGGTGCTCGACACGGCTGTAGCCCCCTCTGTAAAAAGTAAGCCAAG ACGCTCCGCCATTGTCATCACCGCTACCATGGTGGCGGTGGCCGCCTCTCTGGTGCTGATATTCTTGCAAGAGCACCTGG AAAAGATGAGTGAGGCGGATAGAAAGATCTTGGCCGATATCAAAGGGCGCCTCCTCTCTTTGAGGTAA
Upstream 100 bases:
>100_bases TCCTTTAGTTGTGTCGCGTCCGGGAGCGGGCATCGCAGATTTACCACCTTACTAACTGGATTTCGCGCTTTCCGGCGCAG GAGCAACTCGAAGGAAGCCC
Downstream 100 bases:
>100_bases CAGATTTGACGTCAATGACCTGATATGTCGCTGTGCAGGCTATGGATCGTCTTGCTACGATAGGTGTTGCCTTATGAACT CACATTCCCAAAATGCTGAC
Product: polysaccharide chain length determinant domain-containing protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTENQNQADIDVEEQINLLELLQIIAKRKMFIIKMCTFAVVASVAYSFTLPNIYSATAKVLPPQKETAGGLSAMLGQVGG IAGLAPGGLGSGTELYLGLLRSRSVADEVVRRLDLTAYYKTKDAELARRGLEATVRMQTGKDGIINITADDKDPKMAARV ANMYVEELGRTSVRLNLSKAGSERAFLEKRLELVKGELKKAEDEIKAFSQQNSIVQVDSQAKASIEGIARLKAELATKEV QLAALRSRQTDESPEVRSLLAGIKRLQAEMDRMSGPGLGGEGIPAIGNVPRLGLEYARKMRELKIQESVFEQLTKQYEMA KLSEAKDSSAFQVLDTAVAPSVKSKPRRSAIVITATMVAVAASLVLIFLQEHLEKMSEADRKILADIKGRLLSLR
Sequences:
>Translated_395_residues MTENQNQADIDVEEQINLLELLQIIAKRKMFIIKMCTFAVVASVAYSFTLPNIYSATAKVLPPQKETAGGLSAMLGQVGG IAGLAPGGLGSGTELYLGLLRSRSVADEVVRRLDLTAYYKTKDAELARRGLEATVRMQTGKDGIINITADDKDPKMAARV ANMYVEELGRTSVRLNLSKAGSERAFLEKRLELVKGELKKAEDEIKAFSQQNSIVQVDSQAKASIEGIARLKAELATKEV QLAALRSRQTDESPEVRSLLAGIKRLQAEMDRMSGPGLGGEGIPAIGNVPRLGLEYARKMRELKIQESVFEQLTKQYEMA KLSEAKDSSAFQVLDTAVAPSVKSKPRRSAIVITATMVAVAASLVLIFLQEHLEKMSEADRKILADIKGRLLSLR >Mature_394_residues TENQNQADIDVEEQINLLELLQIIAKRKMFIIKMCTFAVVASVAYSFTLPNIYSATAKVLPPQKETAGGLSAMLGQVGGI AGLAPGGLGSGTELYLGLLRSRSVADEVVRRLDLTAYYKTKDAELARRGLEATVRMQTGKDGIINITADDKDPKMAARVA NMYVEELGRTSVRLNLSKAGSERAFLEKRLELVKGELKKAEDEIKAFSQQNSIVQVDSQAKASIEGIARLKAELATKEVQ LAALRSRQTDESPEVRSLLAGIKRLQAEMDRMSGPGLGGEGIPAIGNVPRLGLEYARKMRELKIQESVFEQLTKQYEMAK LSEAKDSSAFQVLDTAVAPSVKSKPRRSAIVITATMVAVAASLVLIFLQEHLEKMSEADRKILADIKGRLLSLR
Specific function: Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium [H]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=237, Percent_Identity=23.2067510548523, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 43107; Mature: 42975
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENQNQADIDVEEQINLLELLQIIAKRKMFIIKMCTFAVVASVAYSFTLPNIYSATAKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LPPQKETAGGLSAMLGQVGGIAGLAPGGLGSGTELYLGLLRSRSVADEVVRRLDLTAYYK CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC TKDAELARRGLEATVRMQTGKDGIINITADDKDPKMAARVANMYVEELGRTSVRLNLSKA CCHHHHHHCCCHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHC GSERAFLEKRLELVKGELKKAEDEIKAFSQQNSIVQVDSQAKASIEGIARLKAELATKEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHH QLAALRSRQTDESPEVRSLLAGIKRLQAEMDRMSGPGLGGEGIPAIGNVPRLGLEYARKM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RELKIQESVFEQLTKQYEMAKLSEAKDSSAFQVLDTAVAPSVKSKPRRSAIVITATMVAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHH AASLVLIFLQEHLEKMSEADRKILADIKGRLLSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TENQNQADIDVEEQINLLELLQIIAKRKMFIIKMCTFAVVASVAYSFTLPNIYSATAKV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LPPQKETAGGLSAMLGQVGGIAGLAPGGLGSGTELYLGLLRSRSVADEVVRRLDLTAYYK CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC TKDAELARRGLEATVRMQTGKDGIINITADDKDPKMAARVANMYVEELGRTSVRLNLSKA CCHHHHHHCCCHHEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHC GSERAFLEKRLELVKGELKKAEDEIKAFSQQNSIVQVDSQAKASIEGIARLKAELATKEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHH QLAALRSRQTDESPEVRSLLAGIKRLQAEMDRMSGPGLGGEGIPAIGNVPRLGLEYARKM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RELKIQESVFEQLTKQYEMAKLSEAKDSSAFQVLDTAVAPSVKSKPRRSAIVITATMVAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHH AASLVLIFLQEHLEKMSEADRKILADIKGRLLSLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]