| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pyrG [H]
Identifier: 197117987
GI number: 197117987
Start: 1854340
End: 1855941
Strand: Direct
Name: pyrG [H]
Synonym: Gbem_1600
Alternate gene names: 197117987
Gene position: 1854340-1855941 (Clockwise)
Preceding gene: 308535252
Following gene: 197117988
Centisome position: 40.18
GC content: 61.74
Gene sequence:
>1602_bases GTGAAGACAAAATTCATCTTTGTTACCGGCGGCGTTGTCTCCTCGATCGGCAAGGGACTCGCCGCCGCTTCTTTGGGCGC TCTTCTTGAGGCTAGGGGGCTTCGGGTCACCATCCAGAAGCTGGATCCGTACATAAACGTCGATCCCGGGACCATGTCCC CCTTCCAGCACGGCGAGGTCTTCGTCACCGACGACGGCGCCGAGACCGACCTCGACCTCGGGCACTACGAGCGCTACACC TCCGGCAAGCTCTCCAAAAAGAGCAACTTCACCACCGGCCAGGTCTACTTCTCGGTCATCGAGAAGGAGCGCCGCGGCGA CTACCTGGGCGGGACCGTGCAGGTCATCCCGCACATCACCGACCAGATCAAGCTGAACATCCTGGAAAACGCCAAGGGCT CCGACATCGCCATCGTCGAGATCGGCGGCACCGTGGGCGACATCGAGTCGCTCCCTTTCCTTGAGGCGATCCGCCAGTTA AAGAGCGACCGCGGCCCCGGCAACGTCCTCTACCTGCACGTGACGCTGGTACCCTACATCAAGACGGCCGGCGAATTGAA GACCAAGCCGACCCAGCACTCGGTGAAGGAGCTGCGCGAGATCGGCATCCAGCCCGATATCCTCCTTTGCCGCTGCGAGC AGGACGTCCCGCAGGACATGAAGGCGAAGATCGCGCTTTTCTGCAACGTGGAAGAGAAGGCGGTCATCACCTCCCAGGAC GCCGAGCACATCTACGCGGTGCCGATGGCGCTGAACCATCAGGGGCTCGACGACCAGGTGGTGGAAAAACTCAACATCTG GACCAAGGCTCCGGACCTCTCCCACTGGCAGCAGGTGGTGTCCAAGCTCACCAATCCCGGCTCCGGCGAGGTGCGCATAG CGGTGGTCGGCAAGTACGTCGACCTCAAGGAGTCCTACAAGTCGCTCTCCGAGGCGCTCACCCACGGCGGCATCGCCAAC GACTGCCGCGTCAAGCTGGTCTACCTCGATTCCGAGAAGATAGAGGAGGACGGGGGCGAGAAGGCGCTGGCCGACGTCGA TGGCATCCTGGTCCCGGGCGGTTTTGGCGAGCGCGGCACCGAAGGGAAGATCAAGGCGATCGAATACGCCCGCGTCAACA AGGTCCCCTTCTTCGGGATCTGCCTCGGCATGCAGATGGCAGCCGTCGAGTACGCCCGCAACGTCTGCCGGCTTCCCGAA GCGTTCTCCAGCGAATTCAAGCCGGACTGCGAGAGCCCGGTGATCCACCTGATGGAAGAGCAAAAGGGAGTGGAGAACAA AGGGGGGACCATGAGGCTCGGCGCCTATCCCTGTTCCCTCACCAAGGGGACCTTCGCCCAGAAGGCCTACGGCGCCACCG AGATCTCCGAACGCCACCGCCACCGTTACGAGTTCAACAACCTTTTCCGCAGTTGCCTTGAGGAGAAGGGGATGGTCATC TCGGGGGTCTACAAAGAGGGGAACCTGGTGGAAATCATCGAACTTCCCGACCATCCGTGGTTCTTGGGGTGCCAGTTCCA CCCCGAGTTCAAGTCCAAGCCGTTGAACCCGCACCCGCTCTTCAAGGCCTTCATCGGGGCCACCAAGGCGAAGAGAGGCT AA
Upstream 100 bases:
>100_bases CTTCAGGTTCACGTCACGCTGCCGCTGGAGTTTTCAGTAGTTTTCGTTGAACGTTGAACCTTGAACGTTGAACTGTTTCT ACGTTTCGGAGGTTTTTTAA
Downstream 100 bases:
>100_bases CCCAGGGTCACGCAAAGCCGCAACCTGAAGCGACCCGTGTCACGCAAAGCCGCAAAGACGCAAAGAAAGGCAAAAGCAAA AACGTTTAACAGGGATAAAT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MKTKFIFVTGGVVSSIGKGLAAASLGALLEARGLRVTIQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYT SGKLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQVIPHITDQIKLNILENAKGSDIAIVEIGGTVGDIESLPFLEAIRQL KSDRGPGNVLYLHVTLVPYIKTAGELKTKPTQHSVKELREIGIQPDILLCRCEQDVPQDMKAKIALFCNVEEKAVITSQD AEHIYAVPMALNHQGLDDQVVEKLNIWTKAPDLSHWQQVVSKLTNPGSGEVRIAVVGKYVDLKESYKSLSEALTHGGIAN DCRVKLVYLDSEKIEEDGGEKALADVDGILVPGGFGERGTEGKIKAIEYARVNKVPFFGICLGMQMAAVEYARNVCRLPE AFSSEFKPDCESPVIHLMEEQKGVENKGGTMRLGAYPCSLTKGTFAQKAYGATEISERHRHRYEFNNLFRSCLEEKGMVI SGVYKEGNLVEIIELPDHPWFLGCQFHPEFKSKPLNPHPLFKAFIGATKAKRG
Sequences:
>Translated_533_residues MKTKFIFVTGGVVSSIGKGLAAASLGALLEARGLRVTIQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYT SGKLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQVIPHITDQIKLNILENAKGSDIAIVEIGGTVGDIESLPFLEAIRQL KSDRGPGNVLYLHVTLVPYIKTAGELKTKPTQHSVKELREIGIQPDILLCRCEQDVPQDMKAKIALFCNVEEKAVITSQD AEHIYAVPMALNHQGLDDQVVEKLNIWTKAPDLSHWQQVVSKLTNPGSGEVRIAVVGKYVDLKESYKSLSEALTHGGIAN DCRVKLVYLDSEKIEEDGGEKALADVDGILVPGGFGERGTEGKIKAIEYARVNKVPFFGICLGMQMAAVEYARNVCRLPE AFSSEFKPDCESPVIHLMEEQKGVENKGGTMRLGAYPCSLTKGTFAQKAYGATEISERHRHRYEFNNLFRSCLEEKGMVI SGVYKEGNLVEIIELPDHPWFLGCQFHPEFKSKPLNPHPLFKAFIGATKAKRG >Mature_533_residues MKTKFIFVTGGVVSSIGKGLAAASLGALLEARGLRVTIQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYT SGKLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQVIPHITDQIKLNILENAKGSDIAIVEIGGTVGDIESLPFLEAIRQL KSDRGPGNVLYLHVTLVPYIKTAGELKTKPTQHSVKELREIGIQPDILLCRCEQDVPQDMKAKIALFCNVEEKAVITSQD AEHIYAVPMALNHQGLDDQVVEKLNIWTKAPDLSHWQQVVSKLTNPGSGEVRIAVVGKYVDLKESYKSLSEALTHGGIAN DCRVKLVYLDSEKIEEDGGEKALADVDGILVPGGFGERGTEGKIKAIEYARVNKVPFFGICLGMQMAAVEYARNVCRLPE AFSSEFKPDCESPVIHLMEEQKGVENKGGTMRLGAYPCSLTKGTFAQKAYGATEISERHRHRYEFNNLFRSCLEEKGMVI SGVYKEGNLVEIIELPDHPWFLGCQFHPEFKSKPLNPHPLFKAFIGATKAKRG
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=45.1905626134301, Blast_Score=477, Evalue=1e-134, Organism=Homo sapiens, GI28559085, Length=549, Percent_Identity=44.4444444444444, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI28559083, Length=549, Percent_Identity=44.4444444444444, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI221316689, Length=549, Percent_Identity=44.4444444444444, Blast_Score=458, Evalue=1e-129, Organism=Escherichia coli, GI1789142, Length=537, Percent_Identity=57.1694599627561, Blast_Score=613, Evalue=1e-177, Organism=Caenorhabditis elegans, GI25148299, Length=608, Percent_Identity=37.5, Blast_Score=410, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6322563, Length=564, Percent_Identity=42.0212765957447, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319432, Length=565, Percent_Identity=41.5929203539823, Blast_Score=430, Evalue=1e-121, Organism=Drosophila melanogaster, GI24664469, Length=549, Percent_Identity=44.2622950819672, Blast_Score=446, Evalue=1e-125, Organism=Drosophila melanogaster, GI21357815, Length=494, Percent_Identity=42.5101214574899, Blast_Score=375, Evalue=1e-104,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 58757; Mature: 58757
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKFIFVTGGVVSSIGKGLAAASLGALLEARGLRVTIQKLDPYINVDPGTMSPFQHGEV CCEEEEEEECHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERYTSGKLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQVIPHIT EEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC DQIKLNILENAKGSDIAIVEIGGTVGDIESLPFLEAIRQLKSDRGPGNVLYLHVTLVPYI CEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEHHH KTAGELKTKPTQHSVKELREIGIQPDILLCRCEQDVPQDMKAKIALFCNVEEKAVITSQD HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCC AEHIYAVPMALNHQGLDDQVVEKLNIWTKAPDLSHWQQVVSKLTNPGSGEVRIAVVGKYV CCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCH DLKESYKSLSEALTHGGIANDCRVKLVYLDSEKIEEDGGEKALADVDGILVPGGFGERGT HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCEEHHCCCCEEECCCCCCCCC EGKIKAIEYARVNKVPFFGICLGMQMAAVEYARNVCRLPEAFSSEFKPDCESPVIHLMEE CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH QKGVENKGGTMRLGAYPCSLTKGTFAQKAYGATEISERHRHRYEFNNLFRSCLEEKGMVI HCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE SGVYKEGNLVEIIELPDHPWFLGCQFHPEFKSKPLNPHPLFKAFIGATKAKRG EEEECCCCEEEEEECCCCCEEEEEEECCHHCCCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MKTKFIFVTGGVVSSIGKGLAAASLGALLEARGLRVTIQKLDPYINVDPGTMSPFQHGEV CCEEEEEEECHHHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCEE FVTDDGAETDLDLGHYERYTSGKLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQVIPHIT EEECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC DQIKLNILENAKGSDIAIVEIGGTVGDIESLPFLEAIRQLKSDRGPGNVLYLHVTLVPYI CEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEHHH KTAGELKTKPTQHSVKELREIGIQPDILLCRCEQDVPQDMKAKIALFCNVEEKAVITSQD HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCC AEHIYAVPMALNHQGLDDQVVEKLNIWTKAPDLSHWQQVVSKLTNPGSGEVRIAVVGKYV CCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCH DLKESYKSLSEALTHGGIANDCRVKLVYLDSEKIEEDGGEKALADVDGILVPGGFGERGT HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHCCCCCEEHHCCCCEEECCCCCCCCC EGKIKAIEYARVNKVPFFGICLGMQMAAVEYARNVCRLPEAFSSEFKPDCESPVIHLMEE CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHH QKGVENKGGTMRLGAYPCSLTKGTFAQKAYGATEISERHRHRYEFNNLFRSCLEEKGMVI HCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE SGVYKEGNLVEIIELPDHPWFLGCQFHPEFKSKPLNPHPLFKAFIGATKAKRG EEEECCCCEEEEEECCCCCEEEEEEECCHHCCCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA