| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mcp020
Identifier: 197117978
GI number: 197117978
Start: 1844755
End: 1846566
Strand: Direct
Name: mcp020
Synonym: Gbem_1591
Alternate gene names: NA
Gene position: 1844755-1846566 (Clockwise)
Preceding gene: 197117977
Following gene: 197117979
Centisome position: 39.97
GC content: 65.4
Gene sequence:
>1812_bases ATGATGCCAGCAGGCAAGGATAGCGTGACGCAGGATGCGGAGTTGAAGAGGCTGTCGGAAGATTGGTCGGCGGTGCTGGC CGAGCAGGCCGCTCAACTGGCTGCCGTTTCCGGGACCACCGAGCAGGAGTTTCTCGATATCGGCGGCAGGCTCCAGGATT TCTACCAGCGGGGCCTCGGGATCTCCGGGCTTGCCTCCGAGATGGTGGGGGAAGTCGCGGGGGACCACGTCATCGGGGCC ATGCGCGGGCTGGGGGAGATGCTCGACGACATGGGGCGCTACGTGAATCGGGCCCAGAACGAGATCGAGGTGAGCGCGGA CACGCTGCGCGAGATCCTGGTACTGCTCGCCAAGGTAAGCGACCCGCTGTCGGGATTCAAGAAGGTGAACAAGGTGCTTA GGATGCTCGGCATCTCCACCAAGATAGAGAGCGCGCGCCTGGGGCAGAGTGCGGCCGGCTTCGACACGCTGGCAAGCGAC GTAGGGGAGCTGTCGGTGCAGGTCAACGACAAGGCCGCCGTAATCCTGAAGCGCAAGGAGGAGCTGGCCCGGACCATTGA ACAGACCCTGGCCGGGGTTTTGAACAGCGGCGCGCAGCAGCATGACCAGGTCATGGCCATCCTTGCCCGGACCCGGGGGA GCATGCAGGCCTTGACCGAGATCAACGCGCGCTGCTCCAGTTCCGTAGCCACGATCTCGGCGGTCTCCGACGAGGTGTAC CGCTCCATCGGCGACGTGGTGATGTCCATGCAGGCCCACGACATCGTAAGGCAGCAGATCGAGCACGTCGACGAGGCGCT GACCGACCTCAAGCACGGGTTGTCCGCCGGGACGGCCGGAGCCGATACCGCGGCTGCGGTCTGCGAACTGCAGATAGCCC AGTTGCGCCATGCCGAGGCGGAACTGGACGATGCGGTCACCACCATCATCGACGGCCTGAGGGAGATCGCGCGCAAGCAG TCGGGGCTCTCGGCGCAGACCTCCAGCATGGCGGGAATGGCGGACCAGACCGGAGGGAGCTTTTTCTCCGAGATGGAGAA AGATATCTCGGTGGTGAGCGACGCACTTTTGGACAGCTCCAAGGTGAACCAGGCGCTCTGCGTGGCCATGGCAACCGTGG CGCAGACCGTGGGGGAGATCGCCACCTTCGTGGGCGACATCGAAAAGATCGGCGAGGAGATCAAGCTGATCGCGCTGAAT GCGCAGATAAAGTCAGCCTACACCGGCGACGAGGGTGCCGCCCTGGGCGTTCTCGCCGAGGCCATCCAGCGCCTCTCCAT CGACGCCATCGACCACACCGGCGCCGTCTCCGGGACCTTGCAGGGGATCATCGCGGTGACCGACCGCCTCAACGAGGGGG TGGGGGCCGAGGCCTCGGGGCTGGAAAGCGAGGTGCACGGCATGGTGCAGACCCTTTCCGGGCTTTTGCAGACGCTAAGG CAGGTGCACGACACCCTGCTGCACTCGCTACGCAACATGGACGACTCGGTCACCCGGCTCTCCGGCGACATCGAACAGGT GGTGGCGGGGATCACGGTGCACCGCAAGGTGAGCCAGGTGCTGGAGACGGCGGTGGGGGAAATAGCGGGGGTCGTGGCGC AGGCCAGAAAGATTGCTCCCGCCTCGCCGGGAGCCGGGAACCTGGAGCAGCTCACCCAGCGCTACACCATGCAAAGCGAA CGCAGGATTCACGAATCGCTCAGCGGGGCTCACGCCGGGCGCGACGCTTCTGCGCGACCGCTCACCGTTGCCGCCGCGCC GCCGCCGGCTGCCACCGAGGACGATCTGGGCGGCAATGTGGAACTTTTCTAG
Upstream 100 bases:
>100_bases ACAATGCCTGACGATAAATTAAAAAGCCGGGCCCGTGACGATGAAAAACGCCCCGGCCGCAATATTTAACGAAGCCATTT GCTCGATAAAGAAGGTACTT
Downstream 100 bases:
>100_bases CAACTTTTCCAGCATAAAGGACGGTTTATGGACGAATTCAAGTTGGAGTGCAGGCAAGACCCAGAGTCGCGGGGAAAACA GATACTGAAAATCTCGGGAG
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: Methyl Accepting Chemotaxis Protein; Arginine N-Succinyltransferase Subunit Beta
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MMPAGKDSVTQDAELKRLSEDWSAVLAEQAAQLAAVSGTTEQEFLDIGGRLQDFYQRGLGISGLASEMVGEVAGDHVIGA MRGLGEMLDDMGRYVNRAQNEIEVSADTLREILVLLAKVSDPLSGFKKVNKVLRMLGISTKIESARLGQSAAGFDTLASD VGELSVQVNDKAAVILKRKEELARTIEQTLAGVLNSGAQQHDQVMAILARTRGSMQALTEINARCSSSVATISAVSDEVY RSIGDVVMSMQAHDIVRQQIEHVDEALTDLKHGLSAGTAGADTAAAVCELQIAQLRHAEAELDDAVTTIIDGLREIARKQ SGLSAQTSSMAGMADQTGGSFFSEMEKDISVVSDALLDSSKVNQALCVAMATVAQTVGEIATFVGDIEKIGEEIKLIALN AQIKSAYTGDEGAALGVLAEAIQRLSIDAIDHTGAVSGTLQGIIAVTDRLNEGVGAEASGLESEVHGMVQTLSGLLQTLR QVHDTLLHSLRNMDDSVTRLSGDIEQVVAGITVHRKVSQVLETAVGEIAGVVAQARKIAPASPGAGNLEQLTQRYTMQSE RRIHESLSGAHAGRDASARPLTVAAAPPPAATEDDLGGNVELF
Sequences:
>Translated_603_residues MMPAGKDSVTQDAELKRLSEDWSAVLAEQAAQLAAVSGTTEQEFLDIGGRLQDFYQRGLGISGLASEMVGEVAGDHVIGA MRGLGEMLDDMGRYVNRAQNEIEVSADTLREILVLLAKVSDPLSGFKKVNKVLRMLGISTKIESARLGQSAAGFDTLASD VGELSVQVNDKAAVILKRKEELARTIEQTLAGVLNSGAQQHDQVMAILARTRGSMQALTEINARCSSSVATISAVSDEVY RSIGDVVMSMQAHDIVRQQIEHVDEALTDLKHGLSAGTAGADTAAAVCELQIAQLRHAEAELDDAVTTIIDGLREIARKQ SGLSAQTSSMAGMADQTGGSFFSEMEKDISVVSDALLDSSKVNQALCVAMATVAQTVGEIATFVGDIEKIGEEIKLIALN AQIKSAYTGDEGAALGVLAEAIQRLSIDAIDHTGAVSGTLQGIIAVTDRLNEGVGAEASGLESEVHGMVQTLSGLLQTLR QVHDTLLHSLRNMDDSVTRLSGDIEQVVAGITVHRKVSQVLETAVGEIAGVVAQARKIAPASPGAGNLEQLTQRYTMQSE RRIHESLSGAHAGRDASARPLTVAAAPPPAATEDDLGGNVELF >Mature_603_residues MMPAGKDSVTQDAELKRLSEDWSAVLAEQAAQLAAVSGTTEQEFLDIGGRLQDFYQRGLGISGLASEMVGEVAGDHVIGA MRGLGEMLDDMGRYVNRAQNEIEVSADTLREILVLLAKVSDPLSGFKKVNKVLRMLGISTKIESARLGQSAAGFDTLASD VGELSVQVNDKAAVILKRKEELARTIEQTLAGVLNSGAQQHDQVMAILARTRGSMQALTEINARCSSSVATISAVSDEVY RSIGDVVMSMQAHDIVRQQIEHVDEALTDLKHGLSAGTAGADTAAAVCELQIAQLRHAEAELDDAVTTIIDGLREIARKQ SGLSAQTSSMAGMADQTGGSFFSEMEKDISVVSDALLDSSKVNQALCVAMATVAQTVGEIATFVGDIEKIGEEIKLIALN AQIKSAYTGDEGAALGVLAEAIQRLSIDAIDHTGAVSGTLQGIIAVTDRLNEGVGAEASGLESEVHGMVQTLSGLLQTLR QVHDTLLHSLRNMDDSVTRLSGDIEQVVAGITVHRKVSQVLETAVGEIAGVVAQARKIAPASPGAGNLEQLTQRYTMQSE RRIHESLSGAHAGRDASARPLTVAAAPPPAATEDDLGGNVELF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63448; Mature: 63448
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00098 THIOLASE_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPAGKDSVTQDAELKRLSEDWSAVLAEQAAQLAAVSGTTEQEFLDIGGRLQDFYQRGLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHCCC ISGLASEMVGEVAGDHVIGAMRGLGEMLDDMGRYVNRAQNEIEVSADTLREILVLLAKVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPLSGFKKVNKVLRMLGISTKIESARLGQSAAGFDTLASDVGELSVQVNDKAAVILKRKE CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHH ELARTIEQTLAGVLNSGAQQHDQVMAILARTRGSMQALTEINARCSSSVATISAVSDEVY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RSIGDVVMSMQAHDIVRQQIEHVDEALTDLKHGLSAGTAGADTAAAVCELQIAQLRHAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ELDDAVTTIIDGLREIARKQSGLSAQTSSMAGMADQTGGSFFSEMEKDISVVSDALLDSS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KVNQALCVAMATVAQTVGEIATFVGDIEKIGEEIKLIALNAQIKSAYTGDEGAALGVLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECHHHHCCCCCCCHHHHHHHH AIQRLSIDAIDHTGAVSGTLQGIIAVTDRLNEGVGAEASGLESEVHGMVQTLSGLLQTLR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QVHDTLLHSLRNMDDSVTRLSGDIEQVVAGITVHRKVSQVLETAVGEIAGVVAQARKIAP HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASPGAGNLEQLTQRYTMQSERRIHESLSGAHAGRDASARPLTVAAAPPPAATEDDLGGNV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC ELF CCC >Mature Secondary Structure MMPAGKDSVTQDAELKRLSEDWSAVLAEQAAQLAAVSGTTEQEFLDIGGRLQDFYQRGLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHCCC ISGLASEMVGEVAGDHVIGAMRGLGEMLDDMGRYVNRAQNEIEVSADTLREILVLLAKVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPLSGFKKVNKVLRMLGISTKIESARLGQSAAGFDTLASDVGELSVQVNDKAAVILKRKE CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHH ELARTIEQTLAGVLNSGAQQHDQVMAILARTRGSMQALTEINARCSSSVATISAVSDEVY HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RSIGDVVMSMQAHDIVRQQIEHVDEALTDLKHGLSAGTAGADTAAAVCELQIAQLRHAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ELDDAVTTIIDGLREIARKQSGLSAQTSSMAGMADQTGGSFFSEMEKDISVVSDALLDSS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KVNQALCVAMATVAQTVGEIATFVGDIEKIGEEIKLIALNAQIKSAYTGDEGAALGVLAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECHHHHCCCCCCCHHHHHHHH AIQRLSIDAIDHTGAVSGTLQGIIAVTDRLNEGVGAEASGLESEVHGMVQTLSGLLQTLR HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QVHDTLLHSLRNMDDSVTRLSGDIEQVVAGITVHRKVSQVLETAVGEIAGVVAQARKIAP HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASPGAGNLEQLTQRYTMQSERRIHESLSGAHAGRDASARPLTVAAAPPPAATEDDLGGNV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCC ELF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA