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The map label for this gene is cpdP [H]

Identifier: 197117966

GI number: 197117966

Start: 1832102

End: 1832860

Strand: Direct

Name: cpdP [H]

Synonym: Gbem_1579

Alternate gene names: 197117966

Gene position: 1832102-1832860 (Clockwise)

Preceding gene: 197117965

Following gene: 197117969

Centisome position: 39.7

GC content: 64.03

Gene sequence:

>759_bases
GTGAGATTACGCGTACTAGGTTGTTCAGGTGCCGAATTCCCCGGACACAGTCCATCGGCTTTTCTGATCGACGACTCTTT
GCTCCTGGACGCCGGGACCGTGGGTGCCGTGCTCAGCGAGGACGAGCAGTGGCGCATCGACGACATCCTGGTGACCCATT
CGCACCTGGACCATATCCGCGGCATCCCGCTTCTGGCCGATAACATCGTCGTCTCCCGACTTTCCCGGACCGTCCAGGTC
CGCGGCACGACTGAAGTCCTCGCGGCTCTCGGCACCCACCTGATGAACGGCGTCATCTGGCCCGATTTCACCCGCATCCC
CACGCCCGAGGCCCCGGTGCTGCGCTACCAGCCGATCCCGGTAGATAAGTCCTTCGCGGTCGGCGATTACGAGGTGCTGG
CCTCCCCCGTGAACCATCCCGTCCCTGCGGTCGGCTATCGGGTGAGCAGGGGGGGGACTTCGCTGCTCTACACAGGCGAC
ACCGGCCCCACCGAGCGCATCTGGGAGTTGGCCGGGGAGTTGGCGGCGCTGATCGTCGAGGTTTCCTTCCCGAGCGACAT
GGCGGAGATAGCGCTTCTCACCGGTCACCTGACGCCCATGCTCCTGGGGAAGGAGCTGGCGAAACTGCCGAAACTCCCCC
CGCGCATCCTGATTACCCATCTGAAACCGCAGTATTACGACCGGATCGAGGCGGAGCTTGCGGCCCTGCGTCTTCCGGGG
GTCGAGCTTTTGCGCGGCGGAAACGTCTATGACCTGTGA

Upstream 100 bases:

>100_bases
GCCGTGGGCAGGTACTCGTTTTTGGGGGGTAATTCTCGATCCCGGAGCGAAGCGGAGTCCCCGCCCCCGGAGGGGGAGGG
TTAGGGAGGGGAGGAAATCT

Downstream 100 bases:

>100_bases
ATGCGCCAATGCCTAACCCGCCTGCAAAAACTCCTCGGGGGCGAGGCTTGTCGCCAGCATCACCATGTTGATGTCCCGGT
GCTCCTTCCAATGCTCGGTC

Product: beta-lactamase superfamily metal-dependent hydrolase

Products: NA

Alternate protein names: 3':5'-CNP; PDEase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRLRVLGCSGAEFPGHSPSAFLIDDSLLLDAGTVGAVLSEDEQWRIDDILVTHSHLDHIRGIPLLADNIVVSRLSRTVQV
RGTTEVLAALGTHLMNGVIWPDFTRIPTPEAPVLRYQPIPVDKSFAVGDYEVLASPVNHPVPAVGYRVSRGGTSLLYTGD
TGPTERIWELAGELAALIVEVSFPSDMAEIALLTGHLTPMLLGKELAKLPKLPPRILITHLKPQYYDRIEAELAALRLPG
VELLRGGNVYDL

Sequences:

>Translated_252_residues
MRLRVLGCSGAEFPGHSPSAFLIDDSLLLDAGTVGAVLSEDEQWRIDDILVTHSHLDHIRGIPLLADNIVVSRLSRTVQV
RGTTEVLAALGTHLMNGVIWPDFTRIPTPEAPVLRYQPIPVDKSFAVGDYEVLASPVNHPVPAVGYRVSRGGTSLLYTGD
TGPTERIWELAGELAALIVEVSFPSDMAEIALLTGHLTPMLLGKELAKLPKLPPRILITHLKPQYYDRIEAELAALRLPG
VELLRGGNVYDL
>Mature_252_residues
MRLRVLGCSGAEFPGHSPSAFLIDDSLLLDAGTVGAVLSEDEQWRIDDILVTHSHLDHIRGIPLLADNIVVSRLSRTVQV
RGTTEVLAALGTHLMNGVIWPDFTRIPTPEAPVLRYQPIPVDKSFAVGDYEVLASPVNHPVPAVGYRVSRGGTSLLYTGD
TGPTERIWELAGELAALIVEVSFPSDMAEIALLTGHLTPMLLGKELAKLPKLPPRILITHLKPQYYDRIEAELAALRLPG
VELLRGGNVYDL

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cAMP phosphodiesterase class-II family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000396 [H]

Pfam domain/function: PF02112 PDEase_II [H]

EC number: =3.1.4.17 [H]

Molecular weight: Translated: 27428; Mature: 27428

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRVLGCSGAEFPGHSPSAFLIDDSLLLDAGTVGAVLSEDEQWRIDDILVTHSHLDHIR
CEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCCEECCCCCEEEHHEEEEHHHHHHHC
GIPLLADNIVVSRLSRTVQVRGTTEVLAALGTHLMNGVIWPDFTRIPTPEAPVLRYQPIP
CCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
VDKSFAVGDYEVLASPVNHPVPAVGYRVSRGGTSLLYTGDTGPTERIWELAGELAALIVE
CCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHEEEE
VSFPSDMAEIALLTGHLTPMLLGKELAKLPKLPPRILITHLKPQYYDRIEAELAALRLPG
ECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHHHCCCC
VELLRGGNVYDL
HHHHCCCCCCCC
>Mature Secondary Structure
MRLRVLGCSGAEFPGHSPSAFLIDDSLLLDAGTVGAVLSEDEQWRIDDILVTHSHLDHIR
CEEEEEECCCCCCCCCCCCEEEEECCEEECCCCCCCEECCCCCEEEHHEEEEHHHHHHHC
GIPLLADNIVVSRLSRTVQVRGTTEVLAALGTHLMNGVIWPDFTRIPTPEAPVLRYQPIP
CCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
VDKSFAVGDYEVLASPVNHPVPAVGYRVSRGGTSLLYTGDTGPTERIWELAGELAALIVE
CCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHEEEE
VSFPSDMAEIALLTGHLTPMLLGKELAKLPKLPPRILITHLKPQYYDRIEAELAALRLPG
ECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHHHCCCC
VELLRGGNVYDL
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]