| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117965
Identifier: 197117965
GI number: 197117965
Start: 1831697
End: 1831912
Strand: Direct
Name: 197117965
Synonym: Gbem_1578
Alternate gene names: NA
Gene position: 1831697-1831912 (Clockwise)
Preceding gene: 197117957
Following gene: 197117966
Centisome position: 39.69
GC content: 52.78
Gene sequence:
>216_bases ATGAAGAAATCCGTACTGTTGATGATGCTGGTGCTTGCGTTGACGGGTGCGTGCAACTCGGACAAGGGCAAGGAGCTTTT CGACACCGCGCAGTTCGAGGAAAAGCAGAACAACAGGGAACACGCAAAGCAGCTCTACCAGGAGATCGTGAACAAATATC CCGATAGCCCGGTTGCGAAACAGGCGCAGGAAAGACTGGCGGTATTGCCGAAATAG
Upstream 100 bases:
>100_bases AGTGATATTTACACTGCGGCAACCTACGTTGAGTTCAAGGCGAAGGTCGTCCTTGATGCCCGCGGCATCAAGAACCCGCC GGAATCAAAAGGAGATATAG
Downstream 100 bases:
>100_bases CCGACCTTCGCCCTTTGGGCTACGGTGGGCAGGCTCCGCCTTCGCCCTTTGGGCTACGGTGGGCAGGCTCCGCCTTCGCG CTGCACGCTGCCGTGGGCAG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MKKSVLLMMLVLALTGACNSDKGKELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAKQAQERLAVLPK
Sequences:
>Translated_71_residues MKKSVLLMMLVLALTGACNSDKGKELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAKQAQERLAVLPK >Mature_71_residues MKKSVLLMMLVLALTGACNSDKGKELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAKQAQERLAVLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8077; Mature: 8077
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVLLMMLVLALTGACNSDKGKELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAK CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH QAQERLAVLPK HHHHHHHCCCC >Mature Secondary Structure MKKSVLLMMLVLALTGACNSDKGKELFDTAQFEEKQNNREHAKQLYQEIVNKYPDSPVAK CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH QAQERLAVLPK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA