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The map label for this gene is nudF [H]

Identifier: 197117952

GI number: 197117952

Start: 1813595

End: 1814047

Strand: Reverse

Name: nudF [H]

Synonym: Gbem_1565

Alternate gene names: 197117952

Gene position: 1814047-1813595 (Counterclockwise)

Preceding gene: 197117953

Following gene: 197117912

Centisome position: 39.31

GC content: 61.15

Gene sequence:

>453_bases
ATGCCCTTTGACTATCTGGCCTGCCCCGCCTGCGGCACCAAGGTCAAGCAGTACAAGAACCCTCTCCCGACGGTAGACGT
CATCATCGAGCTGCCGGAGGGGATCGTTTTGATCGAGCGGCGCAACGAACCTTTTGGGTGGGCGATACCCGGCGGCTTCG
TCGATTACGGCGAATCTCTTGAGGCCGCCGCGGCCCGGGAGATGCTGGAAGAGACCTCGCTCGAGGTTACCGGCCTGAGG
CTCTTGGGATGCTATTCCGATCCTTCGCGGGACACCCGCAGTCATAATATCTCCACAGTGTATGTCGCCACGGCCGCAGG
CACCCCGAAGGCAGGAGACGACGCCGCCAACCTGGCGGTGTTTCCCATCGACAAGCTGCCGCAGCCCCTTTGCTTCGACC
ACGGCAAGATCCTCTCCGACTACCGCCAAAGAAAAGAAGCGGGAACCATCTAG

Upstream 100 bases:

>100_bases
AGAAGAAGTAGCACACACCGAAACACGCTGTACCTTAAGGGGAGGACCGATACCGATGTCCTCCCCTTTTTTTGCTCGAA
ATCCCTCGTGGAGGTGACCC

Downstream 100 bases:

>100_bases
CACCGCTTCAGCGAGAGCTAAAAAAAAGGGGCGGGATGATCACTCGCCCCTCCCCCATTGTCCGTTCACATGCAGCCGCA
GCTTCATGCGTACCACTTAC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPFDYLACPACGTKVKQYKNPLPTVDVIIELPEGIVLIERRNEPFGWAIPGGFVDYGESLEAAAAREMLEETSLEVTGLR
LLGCYSDPSRDTRSHNISTVYVATAAGTPKAGDDAANLAVFPIDKLPQPLCFDHGKILSDYRQRKEAGTI

Sequences:

>Translated_150_residues
MPFDYLACPACGTKVKQYKNPLPTVDVIIELPEGIVLIERRNEPFGWAIPGGFVDYGESLEAAAAREMLEETSLEVTGLR
LLGCYSDPSRDTRSHNISTVYVATAAGTPKAGDDAANLAVFPIDKLPQPLCFDHGKILSDYRQRKEAGTI
>Mature_149_residues
PFDYLACPACGTKVKQYKNPLPTVDVIIELPEGIVLIERRNEPFGWAIPGGFVDYGESLEAAAAREMLEETSLEVTGLRL
LGCYSDPSRDTRSHNISTVYVATAAGTPKAGDDAANLAVFPIDKLPQPLCFDHGKILSDYRQRKEAGTI

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16358; Mature: 16227

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDYLACPACGTKVKQYKNPLPTVDVIIELPEGIVLIERRNEPFGWAIPGGFVDYGESL
CCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEECCCCHHHCCCCH
EAAAAREMLEETSLEVTGLRLLGCYSDPSRDTRSHNISTVYVATAAGTPKAGDDAANLAV
HHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEE
FPIDKLPQPLCFDHGKILSDYRQRKEAGTI
EEHHHCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PFDYLACPACGTKVKQYKNPLPTVDVIIELPEGIVLIERRNEPFGWAIPGGFVDYGESL
CCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCEECCCCHHHCCCCH
EAAAAREMLEETSLEVTGLRLLGCYSDPSRDTRSHNISTVYVATAAGTPKAGDDAANLAV
HHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEE
FPIDKLPQPLCFDHGKILSDYRQRKEAGTI
EEHHHCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]