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The map label for this gene is fadF [H]

Identifier: 197117889

GI number: 197117889

Start: 1737059

End: 1739053

Strand: Direct

Name: fadF [H]

Synonym: Gbem_1502

Alternate gene names: 197117889

Gene position: 1737059-1739053 (Clockwise)

Preceding gene: 197117888

Following gene: 308535245

Centisome position: 37.64

GC content: 63.51

Gene sequence:

>1995_bases
ATGATGCCGCAAACCGCACTCTTCACGACGCTACTGGTCGCCTCGCTCGCCTTTTTCTGCTGGAGCGTGTACCGCCGCTT
TTCACTGGTCTGCTTCGGGCAGCCCGAGGAAAGGCTCGACCACCCCGGGCGCCGCCTGCAGGAGATGCTTTTGTACGCCT
TCGCCCAGCTGCGCGTGGTGAAAAAACCGTTCGGCCTGAACCACTTCGTCATCTTCTGGTCCTTCCTGATCCTGGCCATC
GCCAACGGGGAGTTCCTTTTGAACGGCGTCTTCCCGTCGGTAAGCCTCGCCGCGCTGCCGCAGGGGCTGCACCACGCTCT
GCTGCTCTTGTTCGACCTGGTCTCGCTTCTGACTCTGATAGCGATCGCGCTCTCCTTCGGGAGACGCCTCATCGTGAGGC
CCCCCTATCTCGACTCCCTCTACGTGAAGGGGAGAAGCCCGGAGGCCTTCGTCATCCTCTCCTTCATCGCGCTCCTCATG
CTCGCCTACTTCGGGATGCACGGGGCGCAGATCGCGCAGGGGAAGGAGGCGGCTTCTGCTGCGATGCCGGTATCGAGCTT
CGTAGGGTCGCTTTTAACCCGCTATCCGGGGCTTCTGGGGACGGTCGAGGCCGTCTCCTGGTGGCTGCACGCCCTGGTGC
TTCTGGCCTTCATCTGCTTTTTGCCGCATTCCAAACATATGCACATCTTGACCGCCATCCCCAACTGCTACCTGGGTAGC
CTCGACTGGCCGGCTACCCAGCCGCGCGAGAAGTTCGAGAAGGGGGCCGAGTACGGGGCGGGGAGCGTGGAGCGCTTCAC
CTGGAAGGATCTATTCGACTCCTTCTCCTGCACCGAGTGCGGCCGCTGCCAGGCCGCCTGCCCCGCCGCCAGCACCGGCA
AGGCCTTGAACCCGCGCCAGATCGTGCACGCCATCAAGACCAACCTCCTGGAGAACAGCCACGCGCTCAGAGAGGGGAGG
AAGGGGACGCTCCCGCTCATCGGCAACGAAGGGGAGGGGACCAACACCGAGGAGGCGATCTGGGACTGCACCACCTGCGG
CGCCTGCATGGAGGCCTGCCCGGTGCTGATCGAGCAGATGCCGAAGATCGTCAAGATGAGAAGGCACCTGGTGCAGGACG
AGTCCCGCTTCCCGGAGGAACTCCTGAACCTGTTCGAGAACATGGAGCAGCGCTCCAACCCCTGGGGGATTGCTCCCAGC
GAGCGGAGCAAGTGGGTTTCCACCCTGGAGGTGAAGCCGTTTGTGGCAGGGGAGACCGAGTATCTTCTTTACGTCGGCTG
CGCCGGCTCCTTCGATTCGCGCGCGAAGCAGGTGACCGTGGCGCTTGCCAGCGTGCTGAATGCGGCCGGGGTTTCCTACG
GCATCCTGGGAAAAGAGGAGAAGTGCTGCGGCGATTCGCTGAGAAGGCTCGGCAACGAGTACGTCTTCGAGAAGATGGCA
CTGGAGAACGTGGAGCTCTTCCGCGAGAAGGGTGTCACCAAGGTGATCACCCTCTGCCCGCACTGCCTGACCACGCTTAA
AAACGACTACCGCCAATACGGGCTGGAGCTGGAGGTGCTGCACCAGTCCCAGCTGATCGCGGAGCTTCTCGCGGACGGGC
GCATCAAGCTGGACGGCTCGGAGAAGAGCCTCGGCAAGATCACCTACCACGACCCCTGTTATCTCGGGCGCCACAACGGC
GTGTTCGACGCGCCGCGCGGCGTGATTCAAGCGGCTACCGGAAGCGCCCCGCAGGAGATGGAGAGAAACGGCAGGAACTC
GTTTTGCTGCGGCGCCGGCGGCGGGCGCATGTGGATGGAGGAGTTCACCGGCGAGAGGGTGAACCACGCCCGCGTGGCCG
AGGCGCTTGAAGGCTCCCCCGACACCATCTGCGTCGCCTGCCCCTACTGCATGACCATGATCGAGGACGGCCTGAAGGAC
AAGGGTGCCGGACAGGTGCGGGTGAAGGACGTGGTAGAGGTAGTGGCTGAGGGGCTTTTGCACCGCAAAGCGTAA

Upstream 100 bases:

>100_bases
TGACCGCGAAGCTCAAAGCGCTCAAGGGAGCAAGGTCAGGGGCCTGATTCATCATACTTCCCGCGGCTTAAGGGCCGCAT
TTTTCAAAGAGGAAACATCC

Downstream 100 bases:

>100_bases
CTGTAGCCGAATACTTAGATCTCCCGCCTGGCGCCTTGCCTAAAAAAGGGGCTGCCGGCGGGAGATCTGCTTTTTCAAAA
GGCAACAGGAAAGGATCCAT

Product: iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MMPQTALFTTLLVASLAFFCWSVYRRFSLVCFGQPEERLDHPGRRLQEMLLYAFAQLRVVKKPFGLNHFVIFWSFLILAI
ANGEFLLNGVFPSVSLAALPQGLHHALLLLFDLVSLLTLIAIALSFGRRLIVRPPYLDSLYVKGRSPEAFVILSFIALLM
LAYFGMHGAQIAQGKEAASAAMPVSSFVGSLLTRYPGLLGTVEAVSWWLHALVLLAFICFLPHSKHMHILTAIPNCYLGS
LDWPATQPREKFEKGAEYGAGSVERFTWKDLFDSFSCTECGRCQAACPAASTGKALNPRQIVHAIKTNLLENSHALREGR
KGTLPLIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQMPKIVKMRRHLVQDESRFPEELLNLFENMEQRSNPWGIAPS
ERSKWVSTLEVKPFVAGETEYLLYVGCAGSFDSRAKQVTVALASVLNAAGVSYGILGKEEKCCGDSLRRLGNEYVFEKMA
LENVELFREKGVTKVITLCPHCLTTLKNDYRQYGLELEVLHQSQLIAELLADGRIKLDGSEKSLGKITYHDPCYLGRHNG
VFDAPRGVIQAATGSAPQEMERNGRNSFCCGAGGGRMWMEEFTGERVNHARVAEALEGSPDTICVACPYCMTMIEDGLKD
KGAGQVRVKDVVEVVAEGLLHRKA

Sequences:

>Translated_664_residues
MMPQTALFTTLLVASLAFFCWSVYRRFSLVCFGQPEERLDHPGRRLQEMLLYAFAQLRVVKKPFGLNHFVIFWSFLILAI
ANGEFLLNGVFPSVSLAALPQGLHHALLLLFDLVSLLTLIAIALSFGRRLIVRPPYLDSLYVKGRSPEAFVILSFIALLM
LAYFGMHGAQIAQGKEAASAAMPVSSFVGSLLTRYPGLLGTVEAVSWWLHALVLLAFICFLPHSKHMHILTAIPNCYLGS
LDWPATQPREKFEKGAEYGAGSVERFTWKDLFDSFSCTECGRCQAACPAASTGKALNPRQIVHAIKTNLLENSHALREGR
KGTLPLIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQMPKIVKMRRHLVQDESRFPEELLNLFENMEQRSNPWGIAPS
ERSKWVSTLEVKPFVAGETEYLLYVGCAGSFDSRAKQVTVALASVLNAAGVSYGILGKEEKCCGDSLRRLGNEYVFEKMA
LENVELFREKGVTKVITLCPHCLTTLKNDYRQYGLELEVLHQSQLIAELLADGRIKLDGSEKSLGKITYHDPCYLGRHNG
VFDAPRGVIQAATGSAPQEMERNGRNSFCCGAGGGRMWMEEFTGERVNHARVAEALEGSPDTICVACPYCMTMIEDGLKD
KGAGQVRVKDVVEVVAEGLLHRKA
>Mature_664_residues
MMPQTALFTTLLVASLAFFCWSVYRRFSLVCFGQPEERLDHPGRRLQEMLLYAFAQLRVVKKPFGLNHFVIFWSFLILAI
ANGEFLLNGVFPSVSLAALPQGLHHALLLLFDLVSLLTLIAIALSFGRRLIVRPPYLDSLYVKGRSPEAFVILSFIALLM
LAYFGMHGAQIAQGKEAASAAMPVSSFVGSLLTRYPGLLGTVEAVSWWLHALVLLAFICFLPHSKHMHILTAIPNCYLGS
LDWPATQPREKFEKGAEYGAGSVERFTWKDLFDSFSCTECGRCQAACPAASTGKALNPRQIVHAIKTNLLENSHALREGR
KGTLPLIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQMPKIVKMRRHLVQDESRFPEELLNLFENMEQRSNPWGIAPS
ERSKWVSTLEVKPFVAGETEYLLYVGCAGSFDSRAKQVTVALASVLNAAGVSYGILGKEEKCCGDSLRRLGNEYVFEKMA
LENVELFREKGVTKVITLCPHCLTTLKNDYRQYGLELEVLHQSQLIAELLADGRIKLDGSEKSLGKITYHDPCYLGRHNG
VFDAPRGVIQAATGSAPQEMERNGRNSFCCGAGGGRMWMEEFTGERVNHARVAEALEGSPDTICVACPYCMTMIEDGLKD
KGAGQVRVKDVVEVVAEGLLHRKA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 73402; Mature: 73402

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPQTALFTTLLVASLAFFCWSVYRRFSLVCFGQPEERLDHPGRRLQEMLLYAFAQLRVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHH
KKPFGLNHFVIFWSFLILAIANGEFLLNGVFPSVSLAALPQGLHHALLLLFDLVSLLTLI
HCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIALSFGRRLIVRPPYLDSLYVKGRSPEAFVILSFIALLMLAYFGMHGAQIAQGKEAASA
HHHHHHCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
AMPVSSFVGSLLTRYPGLLGTVEAVSWWLHALVLLAFICFLPHSKHMHILTAIPNCYLGS
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
LDWPATQPREKFEKGAEYGAGSVERFTWKDLFDSFSCTECGRCQAACPAASTGKALNPRQ
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
IVHAIKTNLLENSHALREGRKGTLPLIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQM
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKIVKMRRHLVQDESRFPEELLNLFENMEQRSNPWGIAPSERSKWVSTLEVKPFVAGETE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCEECCCCC
YLLYVGCAGSFDSRAKQVTVALASVLNAAGVSYGILGKEEKCCGDSLRRLGNEYVFEKMA
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LENVELFREKGVTKVITLCPHCLTTLKNDYRQYGLELEVLHQSQLIAELLADGRIKLDGS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCC
EKSLGKITYHDPCYLGRHNGVFDAPRGVIQAATGSAPQEMERNGRNSFCCGAGGGRMWME
CCCCCEEEECCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCHHHHH
EFTGERVNHARVAEALEGSPDTICVACPYCMTMIEDGLKDKGAGQVRVKDVVEVVAEGLL
HHCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH
HRKA
HCCC
>Mature Secondary Structure
MMPQTALFTTLLVASLAFFCWSVYRRFSLVCFGQPEERLDHPGRRLQEMLLYAFAQLRVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHH
KKPFGLNHFVIFWSFLILAIANGEFLLNGVFPSVSLAALPQGLHHALLLLFDLVSLLTLI
HCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIALSFGRRLIVRPPYLDSLYVKGRSPEAFVILSFIALLMLAYFGMHGAQIAQGKEAASA
HHHHHHCCEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
AMPVSSFVGSLLTRYPGLLGTVEAVSWWLHALVLLAFICFLPHSKHMHILTAIPNCYLGS
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
LDWPATQPREKFEKGAEYGAGSVERFTWKDLFDSFSCTECGRCQAACPAASTGKALNPRQ
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
IVHAIKTNLLENSHALREGRKGTLPLIGNEGEGTNTEEAIWDCTTCGACMEACPVLIEQM
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PKIVKMRRHLVQDESRFPEELLNLFENMEQRSNPWGIAPSERSKWVSTLEVKPFVAGETE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECCEECCCCC
YLLYVGCAGSFDSRAKQVTVALASVLNAAGVSYGILGKEEKCCGDSLRRLGNEYVFEKMA
EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LENVELFREKGVTKVITLCPHCLTTLKNDYRQYGLELEVLHQSQLIAELLADGRIKLDGS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCC
EKSLGKITYHDPCYLGRHNGVFDAPRGVIQAATGSAPQEMERNGRNSFCCGAGGGRMWME
CCCCCEEEECCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEECCCCCHHHHH
EFTGERVNHARVAEALEGSPDTICVACPYCMTMIEDGLKDKGAGQVRVKDVVEVVAEGLL
HHCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHH
HRKA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]