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The map label for this gene is bamP [H]

Identifier: 197117857

GI number: 197117857

Start: 1702473

End: 1703381

Strand: Direct

Name: bamP [H]

Synonym: Gbem_1470

Alternate gene names: 197117857

Gene position: 1702473-1703381 (Clockwise)

Preceding gene: 197117856

Following gene: 197117859

Centisome position: 36.89

GC content: 62.71

Gene sequence:

>909_bases
ATGAAAGCACTGCTTATCTGTGAACAAAGGGAAGGAAAGATCCTCGACACCAGTTATGAGCTGGTGGCGTTCGCCGATCG
CCTGGGCGCCGAGAAGGTCCTGGTCCTGGTCGGTAAAGAGGCGCCGAAGGTCGACGCCAAGGTATATCTTGCGGACGTCG
ACAAGTTCGGCGAGTACAACCCGGACCTGCACAAGCAGGTCGTACTGGAGGCGATCCATAAGGAGAATCCCGACTACGTC
GTGTTCGTCCATTCCTCCTACGGCTGGGACCTGGCTCCCAGGGTTGCGGCCGCGCTCAAGGTAGGGCAGGTCTCCGAGGT
CGTCAACATCGTCGACGGCAAGTTCGAGCTGACGCTTTGCAACGCGAAGCTGCGCCGCACCGTGGCCCCCAAAGGGGCAC
GCGCCGTCCTCACCGTCCAGGCAGGCGCCTTCAACGCCGTCGAGGCGTCGGGAAGCGCGCAGGTCGAGGCCATTGACGTC
GCCGGAAGCTCCAAGCTGCAGTTCGTAGGCTACGAGCCCGCCGAGAAGAAAGACGTCGATCTGGGCCGCGCGGAGATCAT
CGTCAGCGCCGGTCGCGGCGTCGGCAAGAAAGAGAACGTCGCGATCATCGCCGAGTTGGCCAAGGCATTCGGCGGCGAAC
TGGGTGCGAGCCGTCCCGTCGTCGACGCCGGCTGGGTCGCCCACAGCCATCAGGTCGGCACCACCGGCCAGACCGTATCC
CCCAAGCTGTACGTTGCCTGCGGCATCTCCGGCGCGATACAGCATCTGGCCGGCATGAAGAAATCCGACTTCATCGTCGC
CATCAACAAAGACAAAGACGCCCCCATCAGCGAGGCCGCAGACGTAATGGTAGTAGCCGACGTACTGCAACTGGCCCCGG
TATTGATGGAAAAGCTGCGCGCCGCGTAG

Upstream 100 bases:

>100_bases
GGCTCCGCCGTCGTGCTGGAAGGTGATCTGGCGCAGATCGCCGATCGTCTGCTGGGGATTCTCAAGGAAAAGACTACGGT
CGTGAAATAGGAGGTGAGCC

Downstream 100 bases:

>100_bases
CCGGAAGATATTGGCTCGGGACAATGCCTGGGACCAGCGCCGTGCGGCGGAGCGAGTGCTCAGCCCTCCGCCGCACGGCT
TGCTTAGACAAAGACCAACG

Product: electron transfer flavoprotein subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKALLICEQREGKILDTSYELVAFADRLGAEKVLVLVGKEAPKVDAKVYLADVDKFGEYNPDLHKQVVLEAIHKENPDYV
VFVHSSYGWDLAPRVAAALKVGQVSEVVNIVDGKFELTLCNAKLRRTVAPKGARAVLTVQAGAFNAVEASGSAQVEAIDV
AGSSKLQFVGYEPAEKKDVDLGRAEIIVSAGRGVGKKENVAIIAELAKAFGGELGASRPVVDAGWVAHSHQVGTTGQTVS
PKLYVACGISGAIQHLAGMKKSDFIVAINKDKDAPISEAADVMVVADVLQLAPVLMEKLRAA

Sequences:

>Translated_302_residues
MKALLICEQREGKILDTSYELVAFADRLGAEKVLVLVGKEAPKVDAKVYLADVDKFGEYNPDLHKQVVLEAIHKENPDYV
VFVHSSYGWDLAPRVAAALKVGQVSEVVNIVDGKFELTLCNAKLRRTVAPKGARAVLTVQAGAFNAVEASGSAQVEAIDV
AGSSKLQFVGYEPAEKKDVDLGRAEIIVSAGRGVGKKENVAIIAELAKAFGGELGASRPVVDAGWVAHSHQVGTTGQTVS
PKLYVACGISGAIQHLAGMKKSDFIVAINKDKDAPISEAADVMVVADVLQLAPVLMEKLRAA
>Mature_302_residues
MKALLICEQREGKILDTSYELVAFADRLGAEKVLVLVGKEAPKVDAKVYLADVDKFGEYNPDLHKQVVLEAIHKENPDYV
VFVHSSYGWDLAPRVAAALKVGQVSEVVNIVDGKFELTLCNAKLRRTVAPKGARAVLTVQAGAFNAVEASGSAQVEAIDV
AGSSKLQFVGYEPAEKKDVDLGRAEIIVSAGRGVGKKENVAIIAELAKAFGGELGASRPVVDAGWVAHSHQVGTTGQTVS
PKLYVACGISGAIQHLAGMKKSDFIVAINKDKDAPISEAADVMVVADVLQLAPVLMEKLRAA

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=309, Percent_Identity=34.3042071197411, Blast_Score=151, Evalue=6e-37,
Organism=Homo sapiens, GI189181759, Length=258, Percent_Identity=36.8217054263566, Blast_Score=144, Evalue=8e-35,
Organism=Escherichia coli, GI1786226, Length=169, Percent_Identity=40.8284023668639, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787990, Length=122, Percent_Identity=38.5245901639344, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082157, Length=239, Percent_Identity=30.5439330543933, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=308, Percent_Identity=35.3896103896104, Blast_Score=163, Evalue=8e-41,
Organism=Saccharomyces cerevisiae, GI6325261, Length=231, Percent_Identity=37.2294372294372, Blast_Score=122, Evalue=9e-29,
Organism=Drosophila melanogaster, GI17136898, Length=313, Percent_Identity=35.7827476038339, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24652801, Length=313, Percent_Identity=35.7827476038339, Blast_Score=166, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 31997; Mature: 31997

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLICEQREGKILDTSYELVAFADRLGAEKVLVLVGKEAPKVDAKVYLADVDKFGEYN
CCEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECHHCCCCC
PDLHKQVVLEAIHKENPDYVVFVHSSYGWDLAPRVAAALKVGQVSEVVNIVDGKFELTLC
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NAKLRRTVAPKGARAVLTVQAGAFNAVEASGSAQVEAIDVAGSSKLQFVGYEPAEKKDVD
CHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCC
LGRAEIIVSAGRGVGKKENVAIIAELAKAFGGELGASRPVVDAGWVAHSHQVGTTGQTVS
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCEEECCCCCCCCCCCC
PKLYVACGISGAIQHLAGMKKSDFIVAINKDKDAPISEAADVMVVADVLQLAPVLMEKLR
CEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AA
CC
>Mature Secondary Structure
MKALLICEQREGKILDTSYELVAFADRLGAEKVLVLVGKEAPKVDAKVYLADVDKFGEYN
CCEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECHHCCCCC
PDLHKQVVLEAIHKENPDYVVFVHSSYGWDLAPRVAAALKVGQVSEVVNIVDGKFELTLC
CCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
NAKLRRTVAPKGARAVLTVQAGAFNAVEASGSAQVEAIDVAGSSKLQFVGYEPAEKKDVD
CHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCC
LGRAEIIVSAGRGVGKKENVAIIAELAKAFGGELGASRPVVDAGWVAHSHQVGTTGQTVS
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCEEECCCCCCCCCCCC
PKLYVACGISGAIQHLAGMKKSDFIVAINKDKDAPISEAADVMVVADVLQLAPVLMEKLR
CEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7875566 [H]