Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117816

Identifier: 197117816

GI number: 197117816

Start: 1648138

End: 1649463

Strand: Reverse

Name: 197117816

Synonym: Gbem_1428

Alternate gene names: NA

Gene position: 1649463-1648138 (Counterclockwise)

Preceding gene: 197117827

Following gene: 197117815

Centisome position: 35.74

GC content: 63.35

Gene sequence:

>1326_bases
ATGCTCAAAAAGGTATGTCTCATTCTCGCCGCCTCGCTGCTCGCAACCACCGCGTCGGCCCAGGAAGTCGCCCCCAACGC
TCCCGAACCCTACAACTGCGACTTCGACCCGGCCTGCGAAGTGGCCCCTGGCCTCTACGGGAAGATGTCCTCGCCGGTCA
CCAGCAAGTTCAAGCTCTCCCTGGGCGGTTTCGTCAAGCTGGACTACGTCTACAACTCGGTGAACCTCGGCAGTAACGGC
GCCCTGGGGACCCTGCAACCGAACGGGATTCCCAAGAAGGGGTCGGTGGCGGACCAGCAGGACCAGTCCCTGTTCACCGC
GCGCCAGTCGCGCCTGTGGTTCAAGGTCGCCGGCCCCACCTTCAAAGGGGCGAAGACCGGCGCAGTGATCGAGACCGACT
TTTACGGCTCCGGCGGCAGCAACGAGTCCGCCAACATGAGGATGCGCCATGCCTACGGCACCCTGGACTGGGAGAACACC
CAGCTCCTCTTCGGCCAGTACTGGGACAACTTCGGGATGGCCAACTCCTCGACGCTCGATTTCGGCCTGGGTGCCACGGC
CGGGAATCCGCAACAGCCGCGCGTGGCCCAGATAAGGGTCACCCAGAAAGTGCCGCTGACGAAAGATGAGACCATGAAAC
TGAGCCTCTCTCTCCAGAACCCGGTTCAGGACACGAACCAGCAAAACGGCTCGGCCACCGACACCTGGGGGAGCGCGGTC
AATGTTGCCGGGCAGGCGGTGCTAGTATCCAAGGCGCTGGGTGTCGCCCCCGGTTTGTGGGGACTGTCCATGAACTCGCT
GCAGGCCGGCTTCTTCGGCCTGTACGGTACCGAGAGCGCGGGGCCGACCGGCAAGGAGCTTGCTTCCTGGGGCTACGGGT
TTTACACCTTCGTTCCCGTCTTGGCCTCCAAGGACGGCAAGAGCCGCGCCATGACGGCGGGCTTCGAAGGGCAGGCTTAC
CAGGCCAGCAACATGTCCTTCAACTACGCGACCGCCACCGCCCTCGTCGGGCCGAGCAACGACCGGACCGGAGCCAAGGG
GTACGGCCTCTTCGCCCAGGGGATGTTCTACCCGACCCAGAACCTGGGGCTCACCGCCGGCTACGGCAAAAGAGCCGCGT
ACGACCAGGCGAGCTACGCGGGAATAGCGAATTACCAGCAGTCGAGTTCGCAGATCTTCGCCAACGTAAGTTACGACATC
AACGCCGCCATCAGGTTCGCGGCCGAGTACCAGAAGCTTGAGACCAAGTACGGCAACAACACCCCCAGCAGCTCCGACCA
GGGCTCGGCCGACGTGTTCCGGTTCTCGGCTTTCTACTTCTTCTAG

Upstream 100 bases:

>100_bases
GCAGCAGCAGGCCGCCTGATTCCGGCACCCGCCCCCACCCCCTGCCCCCCTCTCGCATGGGGAGGGGGGACACAACACTG
CAATGAAAAGGAGGGTTTCA

Downstream 100 bases:

>100_bases
AAAAGTCCACCTTTGCGAAGGTTCTTCCGGGAATTCCGTGGAGAAGAGTCCCCCCCTCCCTTGACGGGAGGGGGGACCAA
GAGCGGCTTTCCCCGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLKKVCLILAASLLATTASAQEVAPNAPEPYNCDFDPACEVAPGLYGKMSSPVTSKFKLSLGGFVKLDYVYNSVNLGSNG
ALGTLQPNGIPKKGSVADQQDQSLFTARQSRLWFKVAGPTFKGAKTGAVIETDFYGSGGSNESANMRMRHAYGTLDWENT
QLLFGQYWDNFGMANSSTLDFGLGATAGNPQQPRVAQIRVTQKVPLTKDETMKLSLSLQNPVQDTNQQNGSATDTWGSAV
NVAGQAVLVSKALGVAPGLWGLSMNSLQAGFFGLYGTESAGPTGKELASWGYGFYTFVPVLASKDGKSRAMTAGFEGQAY
QASNMSFNYATATALVGPSNDRTGAKGYGLFAQGMFYPTQNLGLTAGYGKRAAYDQASYAGIANYQQSSSQIFANVSYDI
NAAIRFAAEYQKLETKYGNNTPSSSDQGSADVFRFSAFYFF

Sequences:

>Translated_441_residues
MLKKVCLILAASLLATTASAQEVAPNAPEPYNCDFDPACEVAPGLYGKMSSPVTSKFKLSLGGFVKLDYVYNSVNLGSNG
ALGTLQPNGIPKKGSVADQQDQSLFTARQSRLWFKVAGPTFKGAKTGAVIETDFYGSGGSNESANMRMRHAYGTLDWENT
QLLFGQYWDNFGMANSSTLDFGLGATAGNPQQPRVAQIRVTQKVPLTKDETMKLSLSLQNPVQDTNQQNGSATDTWGSAV
NVAGQAVLVSKALGVAPGLWGLSMNSLQAGFFGLYGTESAGPTGKELASWGYGFYTFVPVLASKDGKSRAMTAGFEGQAY
QASNMSFNYATATALVGPSNDRTGAKGYGLFAQGMFYPTQNLGLTAGYGKRAAYDQASYAGIANYQQSSSQIFANVSYDI
NAAIRFAAEYQKLETKYGNNTPSSSDQGSADVFRFSAFYFF
>Mature_441_residues
MLKKVCLILAASLLATTASAQEVAPNAPEPYNCDFDPACEVAPGLYGKMSSPVTSKFKLSLGGFVKLDYVYNSVNLGSNG
ALGTLQPNGIPKKGSVADQQDQSLFTARQSRLWFKVAGPTFKGAKTGAVIETDFYGSGGSNESANMRMRHAYGTLDWENT
QLLFGQYWDNFGMANSSTLDFGLGATAGNPQQPRVAQIRVTQKVPLTKDETMKLSLSLQNPVQDTNQQNGSATDTWGSAV
NVAGQAVLVSKALGVAPGLWGLSMNSLQAGFFGLYGTESAGPTGKELASWGYGFYTFVPVLASKDGKSRAMTAGFEGQAY
QASNMSFNYATATALVGPSNDRTGAKGYGLFAQGMFYPTQNLGLTAGYGKRAAYDQASYAGIANYQQSSSQIFANVSYDI
NAAIRFAAEYQKLETKYGNNTPSSSDQGSADVFRFSAFYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47001; Mature: 47001

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKVCLILAASLLATTASAQEVAPNAPEPYNCDFDPACEVAPGLYGKMSSPVTSKFKLS
CHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LGGFVKLDYVYNSVNLGSNGALGTLQPNGIPKKGSVADQQDQSLFTARQSRLWFKVAGPT
CCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC
FKGAKTGAVIETDFYGSGGSNESANMRMRHAYGTLDWENTQLLFGQYWDNFGMANSSTLD
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCCCEE
FGLGATAGNPQQPRVAQIRVTQKVPLTKDETMKLSLSLQNPVQDTNQQNGSATDTWGSAV
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH
NVAGQAVLVSKALGVAPGLWGLSMNSLQAGFFGLYGTESAGPTGKELASWGYGFYTFVPV
HHCCCEEEEHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHH
LASKDGKSRAMTAGFEGQAYQASNMSFNYATATALVGPSNDRTGAKGYGLFAQGMFYPTQ
HHCCCCCCCEEEECCCCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEECCEECCCC
NLGLTAGYGKRAAYDQASYAGIANYQQSSSQIFANVSYDINAAIRFAAEYQKLETKYGNN
CCCEECCCCCCCCCCCCHHCCHHCCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCC
TPSSSDQGSADVFRFSAFYFF
CCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MLKKVCLILAASLLATTASAQEVAPNAPEPYNCDFDPACEVAPGLYGKMSSPVTSKFKLS
CHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LGGFVKLDYVYNSVNLGSNGALGTLQPNGIPKKGSVADQQDQSLFTARQSRLWFKVAGPT
CCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC
FKGAKTGAVIETDFYGSGGSNESANMRMRHAYGTLDWENTQLLFGQYWDNFGMANSSTLD
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCCCEE
FGLGATAGNPQQPRVAQIRVTQKVPLTKDETMKLSLSLQNPVQDTNQQNGSATDTWGSAV
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH
NVAGQAVLVSKALGVAPGLWGLSMNSLQAGFFGLYGTESAGPTGKELASWGYGFYTFVPV
HHCCCEEEEHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHH
LASKDGKSRAMTAGFEGQAYQASNMSFNYATATALVGPSNDRTGAKGYGLFAQGMFYPTQ
HHCCCCCCCEEEECCCCCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEECCEECCCC
NLGLTAGYGKRAAYDQASYAGIANYQQSSSQIFANVSYDINAAIRFAAEYQKLETKYGNN
CCCEECCCCCCCCCCCCHHCCHHCCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCC
TPSSSDQGSADVFRFSAFYFF
CCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA