| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117815
Identifier: 197117815
GI number: 197117815
Start: 1646643
End: 1647929
Strand: Reverse
Name: 197117815
Synonym: Gbem_1427
Alternate gene names: NA
Gene position: 1647929-1646643 (Counterclockwise)
Preceding gene: 197117816
Following gene: 197117794
Centisome position: 35.71
GC content: 64.57
Gene sequence:
>1287_bases ATGGAGCAGGAGACCACCAAGAGGTTGTTCAAAGGGCAGCTCGCCACCGGCTGCGCCGCCCTCATCCTCAGTTTTGCCGT CGCCGCCGTCATCTGGCCCGCCTGGTCGCTGACCGTCAAGTCCCTCTATACGGCCCTGGCAGGCCCGGGTCTCGCCACGG CGGATCCGAAATCCGCCGGGAACCTCGTCGGCGCGGTTGCCCGCGGGACCTTCTTCTGGATGGTCATCAACACCTGGATC TGGTTCACCATCGTCCTTGGCAACTACGGCAAGACCACCCTCACGACCAAGCAGCCCTGGGCCGGCATCTACTACACCCT CGTCGCCTGGTGCGTCGGCGTTGCCGCCTTCCTCGCCCTGATCAGCTTCCTTGGCATCTGGTGGCGCCCCTTCAGCCTCG CCATCATGTTCACCCCGCAGTCGCTGGAGGAGGTGCGCCTGGCCTTCGAAGCGTGGGAGGCGTCCAACTTCTACGCGCTG GCGGTCATCATCGCCCAGATCCCTATGGTTTCGCTGCTGCAGAAATGGCCCTTCGCCAGCAAGGCCGAGAAGCCTGTGGA CGGCTTCGGAGCGCTCGCCATGGGGACCGCAGTAACCTGGATCGTCTGGATGGCGCTGATCGTTCCCAGCTTCATGAAGC TTGCTATCGGCGAGCACCAGATCGTCACCGCCCCCTTTGGGAGCTGGCCCGCCTTTGCCGCCTTCTGCCAGGCCTTCGTG ATCTTCGCCATCATGCCGGTCGAAGGGGCCGAGCTGTACCCGATGAGGCTCTTCGCCAAGAAGCAGCCGTTCATGGGGCT GATAGGCTTCGCCATCGCCCTTGCCGCCGGCTTCATCATGCCTGCCGCGATCAAGGCCGTCGTGGCCCCGCTCAACCTGC TGCCGGGAGCTCCCCTGGATGTGGTGGCGGCGTCGCTTGAGTTGTCCGTGATCGTCTTCATGCTGGCGTGGCATCACCTG TTCGACGACTACCCGAACGCGACGCTGGTACCGAACACCGCCGCCAGGGTCTGCAGCCGCGTCGCCATCTGGTTTGGCGG AGGCACCATCTACGGTCTCATCTGGATCAAGACCTTCAAGTTGATCCCCTACGGCGCGAACGACCTGGGGCTGGGGGTCC CGCCGCTGGGGGTCTTGGCCGGGCAGTTCGCGCTTTTGATGACGCTTCTTTTCCTGAACACCTTCTTCGACAAGTGGCCG CTCGTGCGCAAGGTTAAGGAACCGGCGACCGCCGGGGCAACCGCTCCCGCCGGCGCCTCGCCGGGGCTTGAGGCGATGGC GAAGTAG
Upstream 100 bases:
>100_bases ACCCTTCGCGAAGGGGATTTAGGGAGATTTGCAGTTGGTTCACTAGAGGTAAAGGCGGCAATTTTCTTATTCCCTTCATC CGAATAATAGGAGGTTCAAC
Downstream 100 bases:
>100_bases CAATAACCGGAAAAGTTCCCCCTCCCGTCAAGGGAGGGGGAGACCTGGGTGCCTGTCTCCCCTCGCCCTTTGGGAGAGGG GATGGACGGAGTACCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MEQETTKRLFKGQLATGCAALILSFAVAAVIWPAWSLTVKSLYTALAGPGLATADPKSAGNLVGAVARGTFFWMVINTWI WFTIVLGNYGKTTLTTKQPWAGIYYTLVAWCVGVAAFLALISFLGIWWRPFSLAIMFTPQSLEEVRLAFEAWEASNFYAL AVIIAQIPMVSLLQKWPFASKAEKPVDGFGALAMGTAVTWIVWMALIVPSFMKLAIGEHQIVTAPFGSWPAFAAFCQAFV IFAIMPVEGAELYPMRLFAKKQPFMGLIGFAIALAAGFIMPAAIKAVVAPLNLLPGAPLDVVAASLELSVIVFMLAWHHL FDDYPNATLVPNTAARVCSRVAIWFGGGTIYGLIWIKTFKLIPYGANDLGLGVPPLGVLAGQFALLMTLLFLNTFFDKWP LVRKVKEPATAGATAPAGASPGLEAMAK
Sequences:
>Translated_428_residues MEQETTKRLFKGQLATGCAALILSFAVAAVIWPAWSLTVKSLYTALAGPGLATADPKSAGNLVGAVARGTFFWMVINTWI WFTIVLGNYGKTTLTTKQPWAGIYYTLVAWCVGVAAFLALISFLGIWWRPFSLAIMFTPQSLEEVRLAFEAWEASNFYAL AVIIAQIPMVSLLQKWPFASKAEKPVDGFGALAMGTAVTWIVWMALIVPSFMKLAIGEHQIVTAPFGSWPAFAAFCQAFV IFAIMPVEGAELYPMRLFAKKQPFMGLIGFAIALAAGFIMPAAIKAVVAPLNLLPGAPLDVVAASLELSVIVFMLAWHHL FDDYPNATLVPNTAARVCSRVAIWFGGGTIYGLIWIKTFKLIPYGANDLGLGVPPLGVLAGQFALLMTLLFLNTFFDKWP LVRKVKEPATAGATAPAGASPGLEAMAK >Mature_428_residues MEQETTKRLFKGQLATGCAALILSFAVAAVIWPAWSLTVKSLYTALAGPGLATADPKSAGNLVGAVARGTFFWMVINTWI WFTIVLGNYGKTTLTTKQPWAGIYYTLVAWCVGVAAFLALISFLGIWWRPFSLAIMFTPQSLEEVRLAFEAWEASNFYAL AVIIAQIPMVSLLQKWPFASKAEKPVDGFGALAMGTAVTWIVWMALIVPSFMKLAIGEHQIVTAPFGSWPAFAAFCQAFV IFAIMPVEGAELYPMRLFAKKQPFMGLIGFAIALAAGFIMPAAIKAVVAPLNLLPGAPLDVVAASLELSVIVFMLAWHHL FDDYPNATLVPNTAARVCSRVAIWFGGGTIYGLIWIKTFKLIPYGANDLGLGVPPLGVLAGQFALLMTLLFLNTFFDKWP LVRKVKEPATAGATAPAGASPGLEAMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46151; Mature: 46151
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQETTKRLFKGQLATGCAALILSFAVAAVIWPAWSLTVKSLYTALAGPGLATADPKSAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH NLVGAVARGTFFWMVINTWIWFTIVLGNYGKTTLTTKQPWAGIYYTLVAWCVGVAAFLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH ISFLGIWWRPFSLAIMFTPQSLEEVRLAFEAWEASNFYALAVIIAQIPMVSLLQKWPFAS HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC KAEKPVDGFGALAMGTAVTWIVWMALIVPSFMKLAIGEHQIVTAPFGSWPAFAAFCQAFV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH IFAIMPVEGAELYPMRLFAKKQPFMGLIGFAIALAAGFIMPAAIKAVVAPLNLLPGAPLD HHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVAASLELSVIVFMLAWHHLFDDYPNATLVPNTAARVCSRVAIWFGGGTIYGLIWIKTFK HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHEECCCHHHHHHHHHHHH LIPYGANDLGLGVPPLGVLAGQFALLMTLLFLNTFFDKWPLVRKVKEPATAGATAPAGAS HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCC PGLEAMAK CCHHHHCC >Mature Secondary Structure MEQETTKRLFKGQLATGCAALILSFAVAAVIWPAWSLTVKSLYTALAGPGLATADPKSAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH NLVGAVARGTFFWMVINTWIWFTIVLGNYGKTTLTTKQPWAGIYYTLVAWCVGVAAFLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH ISFLGIWWRPFSLAIMFTPQSLEEVRLAFEAWEASNFYALAVIIAQIPMVSLLQKWPFAS HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC KAEKPVDGFGALAMGTAVTWIVWMALIVPSFMKLAIGEHQIVTAPFGSWPAFAAFCQAFV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH IFAIMPVEGAELYPMRLFAKKQPFMGLIGFAIALAAGFIMPAAIKAVVAPLNLLPGAPLD HHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVAASLELSVIVFMLAWHHLFDDYPNATLVPNTAARVCSRVAIWFGGGTIYGLIWIKTFK HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHEECCCHHHHHHHHHHHH LIPYGANDLGLGVPPLGVLAGQFALLMTLLFLNTFFDKWPLVRKVKEPATAGATAPAGAS HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCC PGLEAMAK CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA