| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117782
Identifier: 197117782
GI number: 197117782
Start: 1608159
End: 1608293
Strand: Direct
Name: 197117782
Synonym: Gbem_1394
Alternate gene names: NA
Gene position: 1608159-1608293 (Clockwise)
Preceding gene: 197117781
Following gene: 197117783
Centisome position: 34.85
GC content: 51.11
Gene sequence:
>135_bases ATGAAACGCAAAATTGCAGGTGCAATCGTTGTCCTGGCCTATATGGTGACCATGTCAGCCTGCCATACCGTGAAAGGTGT CGGCCAAGACATGCAAAGCGGCGGAAGATCCATAGAGAATTCGTCCGGGAAGTAG
Upstream 100 bases:
>100_bases AGCGTTGCGGCATGATCCTTTTAAATTGTATAATGACCAATGGGATGAAGTTAATAATGTGACCGGCGTAGATAGCACGG AACGTCAAAAGGAGAAAGCT
Downstream 100 bases:
>100_bases TTCCTAGCTGGTGTCAAGTCGAAGCTCGAATAAAGGGGGAGATCTGGTTTTGCCGACGGATCTCCCCCTTTTTCGTCGGA GGGTGAACCGATTTCGCAGC
Product: entericidin superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MKRKIAGAIVVLAYMVTMSACHTVKGVGQDMQSGGRSIENSSGK
Sequences:
>Translated_44_residues MKRKIAGAIVVLAYMVTMSACHTVKGVGQDMQSGGRSIENSSGK >Mature_44_residues MKRKIAGAIVVLAYMVTMSACHTVKGVGQDMQSGGRSIENSSGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4599; Mature: 4599
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 9.1 %Met (Translated Protein) 11.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 9.1 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKIAGAIVVLAYMVTMSACHTVKGVGQDMQSGGRSIENSSGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRKIAGAIVVLAYMVTMSACHTVKGVGQDMQSGGRSIENSSGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA