Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117781

Identifier: 197117781

GI number: 197117781

Start: 1606950

End: 1607564

Strand: Direct

Name: 197117781

Synonym: Gbem_1393

Alternate gene names: NA

Gene position: 1606950-1607564 (Clockwise)

Preceding gene: 308535236

Following gene: 197117782

Centisome position: 34.82

GC content: 54.8

Gene sequence:

>615_bases
ATGCCTGGAAATCATGATAGCCATTCCGAAGTGATTGCGAAATCCGCTGCGCTGACTGAGGTGTTCACCGAGGAAAAGTT
CGCCTACATGCTGTCGCTGTGTCCCAATCCCGAGAGCTTGGGCACCGACCACAATCGGTACGAGGCGACTTACACCGCCT
CGCTGAAAGGGGATCCGGAAAAGGTGAAGGCGTGCGAGGCGGAGCGCGTGGTCATGACCCAGAACCTCGCCATTCTCCAC
GGCATCGCCAAAGTCCTTTCGGTAAAAGATCCGACCGTGATGGAGAAACTTGGTTTCGGCAAACCTCCGGAGAAGGCCGC
CATCGCTTCCCACATCATCGACTCTCCTCACGGATTCAAGGTCTTTTTCGATCCAAAAGGTAACCTGTTCGCTACGCTCG
GCAAGGTTGAGGGCGCAAAGGGATATGAGCTTTGGGCTTGTGACGGCGACCCGAACGTCGAGTCCAACTGGAGACTTGTG
CTATTCTCGCTTAACTGCAAAAAGATTCCGATAACCGGGTTGAACCGCACCAGGACCAACTGGCTTAAGATCAGGGGCAT
CCGAGGCAATATTACCGGCCCTTGGTCCTATTTGCAAAGCGTCAACCCTGCCTGA

Upstream 100 bases:

>100_bases
CCTGGAGAGGAGTTGGAATTAGGGAAGAGCGAAAAAAATTTCTTGCCATCGGGGAAGGTGTTTGTAGTATTGGATCAACT
TAATCAAGGAGGTGGTTCGC

Downstream 100 bases:

>100_bases
AGTTCTCCCCACCCCATGCCCCTTTGGAGATCGAGTCCAAAGGGCGTGTTTTTAGTTTCTCCGTCCGCGCTTCTCCTTCC
TGAACCAAAGATAGCTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPGNHDSHSEVIAKSAALTEVFTEEKFAYMLSLCPNPESLGTDHNRYEATYTASLKGDPEKVKACEAERVVMTQNLAILH
GIAKVLSVKDPTVMEKLGFGKPPEKAAIASHIIDSPHGFKVFFDPKGNLFATLGKVEGAKGYELWACDGDPNVESNWRLV
LFSLNCKKIPITGLNRTRTNWLKIRGIRGNITGPWSYLQSVNPA

Sequences:

>Translated_204_residues
MPGNHDSHSEVIAKSAALTEVFTEEKFAYMLSLCPNPESLGTDHNRYEATYTASLKGDPEKVKACEAERVVMTQNLAILH
GIAKVLSVKDPTVMEKLGFGKPPEKAAIASHIIDSPHGFKVFFDPKGNLFATLGKVEGAKGYELWACDGDPNVESNWRLV
LFSLNCKKIPITGLNRTRTNWLKIRGIRGNITGPWSYLQSVNPA
>Mature_203_residues
PGNHDSHSEVIAKSAALTEVFTEEKFAYMLSLCPNPESLGTDHNRYEATYTASLKGDPEKVKACEAERVVMTQNLAILHG
IAKVLSVKDPTVMEKLGFGKPPEKAAIASHIIDSPHGFKVFFDPKGNLFATLGKVEGAKGYELWACDGDPNVESNWRLVL
FSLNCKKIPITGLNRTRTNWLKIRGIRGNITGPWSYLQSVNPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22442; Mature: 22311

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNHDSHSEVIAKSAALTEVFTEEKFAYMLSLCPNPESLGTDHNRYEATYTASLKGDPE
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCCCCCCCEEEEEEEECCCCHH
KVKACEAERVVMTQNLAILHGIAKVLSVKDPTVMEKLGFGKPPEKAAIASHIIDSPHGFK
HHHHCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEE
VFFDPKGNLFATLGKVEGAKGYELWACDGDPNVESNWRLVLFSLNCKKIPITGLNRTRTN
EEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCCC
WLKIRGIRGNITGPWSYLQSVNPA
EEEEEEEECCCCCHHHHHHCCCCC
>Mature Secondary Structure 
PGNHDSHSEVIAKSAALTEVFTEEKFAYMLSLCPNPESLGTDHNRYEATYTASLKGDPE
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHCCCCCCCEEEEEEEECCCCHH
KVKACEAERVVMTQNLAILHGIAKVLSVKDPTVMEKLGFGKPPEKAAIASHIIDSPHGFK
HHHHCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEE
VFFDPKGNLFATLGKVEGAKGYELWACDGDPNVESNWRLVLFSLNCKKIPITGLNRTRTN
EEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEECCCCCCCCCCC
WLKIRGIRGNITGPWSYLQSVNPA
EEEEEEEECCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA