Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117776

Identifier: 197117776

GI number: 197117776

Start: 1604159

End: 1604470

Strand: Reverse

Name: 197117776

Synonym: Gbem_1388

Alternate gene names: NA

Gene position: 1604470-1604159 (Counterclockwise)

Preceding gene: 197117777

Following gene: 197117775

Centisome position: 34.77

GC content: 63.78

Gene sequence:

>312_bases
ATGTTCCCGCAAGTTGACACCCAGGCGGTGCTGGCGATAACACTGGCCGCGCTGGTCACCTACTCCTTGCGCCTGGGTGG
GCTGCTTCTTTCCGCGCGCTTTCCGCGGACCGGGCGCTTTCGCCAGGGGATGGACGCCTTGCCGGGGTCGCTTTTGTTCG
CGCTGGTAATTCCCTCGATCGTGGCAGAAGGGGCATGGGGGGTAGTTGCCGCAGGGTTGACGGCTGTCGTCATGCTGCGG
ACACGCAACACGCTTTTGGCCATGGTGTTGGGAATGGCGGTGATCTTCGCCGCCCGCAGGTTGACGCCGTAA

Upstream 100 bases:

>100_bases
TTCCTGCCCGGGAAGTGGTATATCGTCATCGGAGGGGTGGGAGGCGCCATAACAGCGATGCTGGCAGCGCCTAAGACACC
GGCCTCGAAGGAGGGCGAGC

Downstream 100 bases:

>100_bases
ATGGCGGGGACACGCTGATGGAAAATTTCGCCATGATCGGGGCCTTTGTCCTTTTGGGGATGCTCTTTCGCCGCACCGGG
TTTTTTCCAAAAGATTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFPQVDTQAVLAITLAALVTYSLRLGGLLLSARFPRTGRFRQGMDALPGSLLFALVIPSIVAEGAWGVVAAGLTAVVMLR
TRNTLLAMVLGMAVIFAARRLTP

Sequences:

>Translated_103_residues
MFPQVDTQAVLAITLAALVTYSLRLGGLLLSARFPRTGRFRQGMDALPGSLLFALVIPSIVAEGAWGVVAAGLTAVVMLR
TRNTLLAMVLGMAVIFAARRLTP
>Mature_103_residues
MFPQVDTQAVLAITLAALVTYSLRLGGLLLSARFPRTGRFRQGMDALPGSLLFALVIPSIVAEGAWGVVAAGLTAVVMLR
TRNTLLAMVLGMAVIFAARRLTP

Specific function: Unknown

COG id: COG4541

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10896; Mature: 10896

Theoretical pI: Translated: 12.40; Mature: 12.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPQVDTQAVLAITLAALVTYSLRLGGLLLSARFPRTGRFRQGMDALPGSLLFALVIPSI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHCCHHHHHHHHHHHHH
VAEGAWGVVAAGLTAVVMLRTRNTLLAMVLGMAVIFAARRLTP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPQVDTQAVLAITLAALVTYSLRLGGLLLSARFPRTGRFRQGMDALPGSLLFALVIPSI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHCCHHHHHHHHHHHHH
VAEGAWGVVAAGLTAVVMLRTRNTLLAMVLGMAVIFAARRLTP
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA