| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is ahcY [H]
Identifier: 197117734
GI number: 197117734
Start: 1551511
End: 1552908
Strand: Direct
Name: ahcY [H]
Synonym: Gbem_1346
Alternate gene names: 197117734
Gene position: 1551511-1552908 (Clockwise)
Preceding gene: 197117733
Following gene: 197117735
Centisome position: 33.62
GC content: 62.66
Gene sequence:
>1398_bases ATGAAAGAAAACGATTACATCGTAAAGGACATGTCGCTGGCGGCCTGGGGCCGCAAAGAGATGATCATCGCCGAGACCGA AATGCCGGGCCTCATGGCGATCCGCGAGGAGTACGCCGCGAGCCAGCCGCTCAAAGGGGCGCGCATCGCAGGCTCGCTGC ACATGACCATACAGACCGCAATGCTGATCGAGACCCTCACCGCTCTGGGCGCCGAGGTCCGCTGGGCTTCCTGCAACATC TTCTCTACCCAGGATCACGCGGCTGCGGCCATCGCGGCTGCAGGGATCCCGGTCTTCGCGCACAAGGGCGAGACGCTGGC GGAGTACTGGGATTACACCCACAAGATCTTTGAGTGGCACGACGGCGGCGCCCCCAACATGATCCTCGACGACGGCGGCG ACGCCACCTTGCTGCTGCACCTGGGAAGCGACGCGGAGAAGAACCCCTCCGTCATCGCCAACCCCACCTGCGAGGAGGAG CAGTTCCTCTTCGCCGCCATCAAGAAGCGCCTGGAGACAAACCCCGGCTGGTACTCGAAGACCGCGGCCAGCATCAAGGG CGTCACCGAGGAAACCACCACCGGCGTGCACCGCCTGTACCAGATGCACGAGAAAGGGACGCTCAAGTTCCCGGCCATCA ACGTCAACGACTCGGTGACCAAGTCCAAGTTCGACAACATCTACGGCTGCCGCGAGTCCCTCATGGACGGGATCAAGCGC GCCACCGACGTCATGGTGGCGGGCAAGGTCGCGGTCATCTGCGGCTACGGCGACGTGGGCAAGGGTTGCTCCCAGGCGAT GCGCGGGCTGCAGGCCCAGGTTTGGGTGACCGAGGTCGACCCGATCTGCGCGCTCCAGGCGGCGATGGAAGGCTACAAGG TCGTGACCATGGAATGGGCCGCCGACAAGGCGGACATCTTCGTGACCACCACCGGCAACATCGACGTCATCACCCATGAC CACATGAAGGCGATGAAGCACAACGCCATCGTCTGCAACATCGGCCACTTCGACAACGAAATCGAGGTCGCGAAACTGAA GCAGTACCAGTGGGAGAACATCAAGCCGCAGGTGGATCACATCATCTTCCCGGACGGCAAGCGCATCATCCTCCTGGCGG AAGGGCGTCTGGTCAACCTCGGTTGCGCCACCGGCCACCCCTCCTACGTCATGTCCTCCTCCTTCGCCAACCAGACCCTG GCGCAGATGGAGATCTTCTGCAACCCCGGCAAGTACCCGGTCGGCGTCTACACCCTTCCGAAGGAACTGGACGAGAAGGT GGCGCGCCTGCAGCTGAAGACACTGGGCGCCATGCTCACCGAGCTCACCGACGCTCAGGCTGACTACATCGGCGTGAAGA AGGACGGGCCGTACAAGTCGGAGCACTACCGCTACTAA
Upstream 100 bases:
>100_bases AGGAATAAAAGGGGACAGGCTACTTTTTCAAACGAAAAAGTAGCCTGTCCCCCTTAAATGACGAATTGTTGCAGATAACC CACCAAAAGGAGAAGCATCG
Downstream 100 bases:
>100_bases AACGCGGATAGACTCCCCCTCCCTTGACGGTGTATAGACTGGGGACATGGTTTACAAATGTTCGGGGACATAGTTAACAC TTTTGCCAAGAATGACCTTT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKENDYIVKDMSLAAWGRKEMIIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTALGAEVRWASCNI FSTQDHAAAAIAAAGIPVFAHKGETLAEYWDYTHKIFEWHDGGAPNMILDDGGDATLLLHLGSDAEKNPSVIANPTCEEE QFLFAAIKKRLETNPGWYSKTAASIKGVTEETTTGVHRLYQMHEKGTLKFPAINVNDSVTKSKFDNIYGCRESLMDGIKR ATDVMVAGKVAVICGYGDVGKGCSQAMRGLQAQVWVTEVDPICALQAAMEGYKVVTMEWAADKADIFVTTTGNIDVITHD HMKAMKHNAIVCNIGHFDNEIEVAKLKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTL AQMEIFCNPGKYPVGVYTLPKELDEKVARLQLKTLGAMLTELTDAQADYIGVKKDGPYKSEHYRY
Sequences:
>Translated_465_residues MKENDYIVKDMSLAAWGRKEMIIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTALGAEVRWASCNI FSTQDHAAAAIAAAGIPVFAHKGETLAEYWDYTHKIFEWHDGGAPNMILDDGGDATLLLHLGSDAEKNPSVIANPTCEEE QFLFAAIKKRLETNPGWYSKTAASIKGVTEETTTGVHRLYQMHEKGTLKFPAINVNDSVTKSKFDNIYGCRESLMDGIKR ATDVMVAGKVAVICGYGDVGKGCSQAMRGLQAQVWVTEVDPICALQAAMEGYKVVTMEWAADKADIFVTTTGNIDVITHD HMKAMKHNAIVCNIGHFDNEIEVAKLKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTL AQMEIFCNPGKYPVGVYTLPKELDEKVARLQLKTLGAMLTELTDAQADYIGVKKDGPYKSEHYRY >Mature_465_residues MKENDYIVKDMSLAAWGRKEMIIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTAMLIETLTALGAEVRWASCNI FSTQDHAAAAIAAAGIPVFAHKGETLAEYWDYTHKIFEWHDGGAPNMILDDGGDATLLLHLGSDAEKNPSVIANPTCEEE QFLFAAIKKRLETNPGWYSKTAASIKGVTEETTTGVHRLYQMHEKGTLKFPAINVNDSVTKSKFDNIYGCRESLMDGIKR ATDVMVAGKVAVICGYGDVGKGCSQAMRGLQAQVWVTEVDPICALQAAMEGYKVVTMEWAADKADIFVTTTGNIDVITHD HMKAMKHNAIVCNIGHFDNEIEVAKLKQYQWENIKPQVDHIIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTL AQMEIFCNPGKYPVGVYTLPKELDEKVARLQLKTLGAMLTELTDAQADYIGVKKDGPYKSEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=61.2554112554113, Blast_Score=535, Evalue=1e-152, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=61.1363636363636, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=48.6021505376344, Blast_Score=457, Evalue=1e-129, Organism=Homo sapiens, GI24308043, Length=468, Percent_Identity=48.5042735042735, Blast_Score=457, Evalue=1e-128, Organism=Homo sapiens, GI195539337, Length=468, Percent_Identity=48.5042735042735, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=48.6021505376344, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI21361647, Length=465, Percent_Identity=47.5268817204301, Blast_Score=433, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=58.7096774193548, Blast_Score=525, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=58.1589958158996, Blast_Score=519, Evalue=1e-148, Organism=Drosophila melanogaster, GI24642172, Length=467, Percent_Identity=59.9571734475375, Blast_Score=527, Evalue=1e-150, Organism=Drosophila melanogaster, GI24656245, Length=469, Percent_Identity=49.2537313432836, Blast_Score=453, Evalue=1e-128, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=50.3239740820734, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=50.2164502164502, Blast_Score=444, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51249; Mature: 51249
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENDYIVKDMSLAAWGRKEMIIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTA CCCCCEEEEECEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECEEEHHHHHH MLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAHKGETLAEYWDYTHKIFEWH HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHEEEC DGGAPNMILDDGGDATLLLHLGSDAEKNPSVIANPTCEEEQFLFAAIKKRLETNPGWYSK CCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC TAASIKGVTEETTTGVHRLYQMHEKGTLKFPAINVNDSVTKSKFDNIYGCRESLMDGIKR HHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ATDVMVAGKVAVICGYGDVGKGCSQAMRGLQAQVWVTEVDPICALQAAMEGYKVVTMEWA HHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCEEEEEEEC ADKADIFVTTTGNIDVITHDHMKAMKHNAIVCNIGHFDNEIEVAKLKQYQWENIKPQVDH CCCCCEEEEECCCEEEEECHHHHHHHCCEEEEEECCCCCCEEHHHHHHHHCCCCCCCCCE IIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQMEIFCNPGKYPVGVYTLP EECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEEEECC KELDEKVARLQLKTLGAMLTELTDAQADYIGVKKDGPYKSEHYRY HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MKENDYIVKDMSLAAWGRKEMIIAETEMPGLMAIREEYAASQPLKGARIAGSLHMTIQTA CCCCCEEEEECEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECEEEHHHHHH MLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAHKGETLAEYWDYTHKIFEWH HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHEEEC DGGAPNMILDDGGDATLLLHLGSDAEKNPSVIANPTCEEEQFLFAAIKKRLETNPGWYSK CCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC TAASIKGVTEETTTGVHRLYQMHEKGTLKFPAINVNDSVTKSKFDNIYGCRESLMDGIKR HHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH ATDVMVAGKVAVICGYGDVGKGCSQAMRGLQAQVWVTEVDPICALQAAMEGYKVVTMEWA HHHEEEECCEEEEECCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHCCCEEEEEEEC ADKADIFVTTTGNIDVITHDHMKAMKHNAIVCNIGHFDNEIEVAKLKQYQWENIKPQVDH CCCCCEEEEECCCEEEEECHHHHHHHCCEEEEEECCCCCCEEHHHHHHHHCCCCCCCCCE IIFPDGKRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQMEIFCNPGKYPVGVYTLP EECCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEEEECC KELDEKVARLQLKTLGAMLTELTDAQADYIGVKKDGPYKSEHYRY HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA