| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is arsR [C]
Identifier: 197117733
GI number: 197117733
Start: 1550501
End: 1551418
Strand: Direct
Name: arsR [C]
Synonym: Gbem_1345
Alternate gene names: 197117733
Gene position: 1550501-1551418 (Clockwise)
Preceding gene: 197117732
Following gene: 197117734
Centisome position: 33.6
GC content: 64.38
Gene sequence:
>918_bases ATGATCGATTTACTAAAAGCTCTGGCTGATCCTTGCCGCCTCCGTCTGGTGGGGGCGCTTCTGCGCGCCGAACTCACGGT GCAGGAGCTGACCCAGATCCTCGGCATGGGGCAGTCGCGCATCTCGCGGCACCTGAAGATCCTCACCGAGGCGGGGGTCC TGTCGGTCAAGCGCCAGGGAACCTGGAGCTACTACCGGGCGGGAGAGGGAAACGCCTTTTTCTGCGCCATCCGTCCCCAG TTCGAGCTGGAGTTGGAGCGGCTTCCTGAGCGAAACGACGATCTCGCGGCGGTGGCGCTGGCCCTGGAGGCAAGGCGCAG GCGCAGCCTTGAGTTTTTCGACCAGCACGCGGCGCAGTGGGATGTCCTGTCGCGCACGCTGCTGCCGGTTCCGCCCTACC TCGACCGTCTGCTGGGCCGGATTCCTGCCGTGGAAACCGTGCTTGAGATCGGCGTCGGCACCGGCGCGCTCTTGCCCGAA TTATGCTTGCATGCAGCAAAGGTTATCGGCGTGGATCATTCGCCGGCCATGCTCGAAGAGGCGCGCCAGCGCATCACCAG CGGCGGAAACCAGGGAGCCGAGCTGCGGCTGGGCGAGATGACGCATCTCCCCATAGCCGACGGCGGGGCGGGGTGTGTCA TAGCAAACATGGTGCTGCACCATGCCGCCGATCCTATGACAGTACTGGGTGAGATTCAGCGGGTGCTCCAGCCCGGCGGG GCGCTGGTCATGGCTGACCTGGCACGCCATGAGCGGGAATGGGCTCGCGAGCAGTTGGCGGATCAGTGGCTGGGTTTCGA GGAAGAAGAACTGAAGGGTTGGATCGCCGCAGCCGGTTTCGGCGCGGTAGAGATAGAGCGGATAGCCGCCGGGGCCGGGC AAGAACCCGTCCTGCTGGTAAAGGCGGTAAAGGAATAA
Upstream 100 bases:
>100_bases AAAATTGGAGCTAAATAATTCATCTTTGCGCTTGATGCCGGTCCTTGCATATGCTATATCAAGAAAACTTGATTTAATAG AACCGTCAGGGTTGATGGAC
Downstream 100 bases:
>100_bases AAGGGGACAGGCTACTTTTTCAAACGAAAAAGTAGCCTGTCCCCCTTAAATGACGAATTGTTGCAGATAACCCACCAAAA GGAGAAGCATCGATGAAAGA
Product: bifunctional helix-turn-helix metal-dependent transcriptional regulator/SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MIDLLKALADPCRLRLVGALLRAELTVQELTQILGMGQSRISRHLKILTEAGVLSVKRQGTWSYYRAGEGNAFFCAIRPQ FELELERLPERNDDLAAVALALEARRRRSLEFFDQHAAQWDVLSRTLLPVPPYLDRLLGRIPAVETVLEIGVGTGALLPE LCLHAAKVIGVDHSPAMLEEARQRITSGGNQGAELRLGEMTHLPIADGGAGCVIANMVLHHAADPMTVLGEIQRVLQPGG ALVMADLARHEREWAREQLADQWLGFEEEELKGWIAAAGFGAVEIERIAAGAGQEPVLLVKAVKE
Sequences:
>Translated_305_residues MIDLLKALADPCRLRLVGALLRAELTVQELTQILGMGQSRISRHLKILTEAGVLSVKRQGTWSYYRAGEGNAFFCAIRPQ FELELERLPERNDDLAAVALALEARRRRSLEFFDQHAAQWDVLSRTLLPVPPYLDRLLGRIPAVETVLEIGVGTGALLPE LCLHAAKVIGVDHSPAMLEEARQRITSGGNQGAELRLGEMTHLPIADGGAGCVIANMVLHHAADPMTVLGEIQRVLQPGG ALVMADLARHEREWAREQLADQWLGFEEEELKGWIAAAGFGAVEIERIAAGAGQEPVLLVKAVKE >Mature_305_residues MIDLLKALADPCRLRLVGALLRAELTVQELTQILGMGQSRISRHLKILTEAGVLSVKRQGTWSYYRAGEGNAFFCAIRPQ FELELERLPERNDDLAAVALALEARRRRSLEFFDQHAAQWDVLSRTLLPVPPYLDRLLGRIPAVETVLEIGVGTGALLPE LCLHAAKVIGVDHSPAMLEEARQRITSGGNQGAELRLGEMTHLPIADGGAGCVIANMVLHHAADPMTVLGEIQRVLQPGG ALVMADLARHEREWAREQLADQWLGFEEEELKGWIAAAGFGAVEIERIAAGAGQEPVLLVKAVKE
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 33357; Mature: 33357
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLLKALADPCRLRLVGALLRAELTVQELTQILGMGQSRISRHLKILTEAGVLSVKRQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHEEECCC TWSYYRAGEGNAFFCAIRPQFELELERLPERNDDLAAVALALEARRRRSLEFFDQHAAQW CCCEEECCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVLSRTLLPVPPYLDRLLGRIPAVETVLEIGVGTGALLPELCLHAAKVIGVDHSPAMLEE HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH ARQRITSGGNQGAELRLGEMTHLPIADGGAGCVIANMVLHHAADPMTVLGEIQRVLQPGG HHHHHHCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ALVMADLARHEREWAREQLADQWLGFEEEELKGWIAAAGFGAVEIERIAAGAGQEPVLLV CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEE KAVKE EECCC >Mature Secondary Structure MIDLLKALADPCRLRLVGALLRAELTVQELTQILGMGQSRISRHLKILTEAGVLSVKRQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHEEECCC TWSYYRAGEGNAFFCAIRPQFELELERLPERNDDLAAVALALEARRRRSLEFFDQHAAQW CCCEEECCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DVLSRTLLPVPPYLDRLLGRIPAVETVLEIGVGTGALLPELCLHAAKVIGVDHSPAMLEE HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH ARQRITSGGNQGAELRLGEMTHLPIADGGAGCVIANMVLHHAADPMTVLGEIQRVLQPGG HHHHHHCCCCCCCEEEECCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC ALVMADLARHEREWAREQLADQWLGFEEEELKGWIAAAGFGAVEIERIAAGAGQEPVLLV CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEE KAVKE EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155856 [H]