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The map label for this gene is etfB-5 [H]

Identifier: 197117721

GI number: 197117721

Start: 1536884

End: 1537660

Strand: Direct

Name: etfB-5 [H]

Synonym: Gbem_1333

Alternate gene names: 197117721

Gene position: 1536884-1537660 (Clockwise)

Preceding gene: 197117720

Following gene: 197117722

Centisome position: 33.3

GC content: 60.88

Gene sequence:

>777_bases
ATGAAAATCCTGGTGTGCATAAAGCAGGTCCCCGACATGGAATCCAGATTCAGGCCCGATGCTTCTGGCGTCTGGTACTC
GGAGATAGACATGGCCTTCCGCGTCAACGAGTACGACGAATACGCCATCGAAGAGGCGGTCCGGCTCAAGGAAAAGCTGG
GAGGCGAGCCGGAGTTGACCGTGCTGTCGCTGGGACCAGACCGGGTGGTGGAGGGAATCAAGAAGGCGCTCGCCATGGGG
TGCGACCGGGGGATACATGTGCAGGACAGCGCCTCCCAATTGAAAGATCCCTGGCAGATCGCCTCGGCGATAGCCGCCAG
CGCCAGAGGGGAGAACTACGACCTGATCTTCACCGGGCTGCAGTCCCAGGACCGCGGCTCAGCCCAGGTGGGAACCATGG
TGGCCGAACTGTTAGAGTATTCCTGTGCCACCACCGTGATCGGTTTCGAATACGCTGAGGGGTCAGTTACCGTCAAGCGG
GAGCTCGAAGGGGGACTGAGGGCAGTGGTGAGGCTTAAGACCCCGGCCCTGGTGACTTGCCAGTTGGGCCTGAACCAGCC
GCGCTATCCGACGCTCCCCAACATCATGAAGGCCAAGAAAAAGGAGATCCTGACCGTCCCGGTGTCCGAACTGTTGCACG
AGGAGCCGCGGACGGTGATGGCGGGCTTCTACGCTCCTGCCAAGAAGGGGACCGGCGTCGTCCTCGAAGGGGACGTCGCC
GATCAGGTGGACAAGCTGATCGGGATACTCAAGGACAAGACGGGGCTTTTACGCTAG

Upstream 100 bases:

>100_bases
TTTGACAGCGGTACGTCGTCCTATATCCTCTCCTATGTTGCTTTCGCAGACCTTGCGCCGGCATCGGGGAATGGCAATTA
ATGGTCTGGAGGAGATAATC

Downstream 100 bases:

>100_bases
GGGGAGATATGAAAGCGTTGCTGATAGCTGAGTGCAGGGACGGGAAAATTCTGGATTACAGCTACGAGCTGTTTGGTTTC
GCGGCGCGGCTTTCCGCGGA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKILVCIKQVPDMESRFRPDASGVWYSEIDMAFRVNEYDEYAIEEAVRLKEKLGGEPELTVLSLGPDRVVEGIKKALAMG
CDRGIHVQDSASQLKDPWQIASAIAASARGENYDLIFTGLQSQDRGSAQVGTMVAELLEYSCATTVIGFEYAEGSVTVKR
ELEGGLRAVVRLKTPALVTCQLGLNQPRYPTLPNIMKAKKKEILTVPVSELLHEEPRTVMAGFYAPAKKGTGVVLEGDVA
DQVDKLIGILKDKTGLLR

Sequences:

>Translated_258_residues
MKILVCIKQVPDMESRFRPDASGVWYSEIDMAFRVNEYDEYAIEEAVRLKEKLGGEPELTVLSLGPDRVVEGIKKALAMG
CDRGIHVQDSASQLKDPWQIASAIAASARGENYDLIFTGLQSQDRGSAQVGTMVAELLEYSCATTVIGFEYAEGSVTVKR
ELEGGLRAVVRLKTPALVTCQLGLNQPRYPTLPNIMKAKKKEILTVPVSELLHEEPRTVMAGFYAPAKKGTGVVLEGDVA
DQVDKLIGILKDKTGLLR
>Mature_258_residues
MKILVCIKQVPDMESRFRPDASGVWYSEIDMAFRVNEYDEYAIEEAVRLKEKLGGEPELTVLSLGPDRVVEGIKKALAMG
CDRGIHVQDSASQLKDPWQIASAIAASARGENYDLIFTGLQSQDRGSAQVGTMVAELLEYSCATTVIGFEYAEGSVTVKR
ELEGGLRAVVRLKTPALVTCQLGLNQPRYPTLPNIMKAKKKEILTVPVSELLHEEPRTVMAGFYAPAKKGTGVVLEGDVA
DQVDKLIGILKDKTGLLR

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=207, Percent_Identity=42.0289855072464, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI62420877, Length=190, Percent_Identity=43.1578947368421, Blast_Score=132, Evalue=4e-31,
Organism=Escherichia coli, GI87081682, Length=249, Percent_Identity=31.3253012048193, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367123, Length=205, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082158, Length=214, Percent_Identity=28.0373831775701, Blast_Score=68, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=260, Percent_Identity=36.9230769230769, Blast_Score=138, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6321646, Length=257, Percent_Identity=31.1284046692607, Blast_Score=108, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24651147, Length=256, Percent_Identity=37.890625, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24651145, Length=256, Percent_Identity=37.890625, Blast_Score=136, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28241; Mature: 28241

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVCIKQVPDMESRFRPDASGVWYSEIDMAFRVNEYDEYAIEEAVRLKEKLGGEPELT
CEEEEEECCCCCHHHHCCCCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCCEE
VLSLGPDRVVEGIKKALAMGCDRGIHVQDSASQLKDPWQIASAIAASARGENYDLIFTGL
EEECCHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECC
QSQDRGSAQVGTMVAELLEYSCATTVIGFEYAEGSVTVKRELEGGLRAVVRLKTPALVTC
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHCCHHHEEEEECCCEEEEE
QLGLNQPRYPTLPNIMKAKKKEILTVPVSELLHEEPRTVMAGFYAPAKKGTGVVLEGDVA
EECCCCCCCCCCHHHHHHHHHHEEEECHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCHH
DQVDKLIGILKDKTGLLR
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKILVCIKQVPDMESRFRPDASGVWYSEIDMAFRVNEYDEYAIEEAVRLKEKLGGEPELT
CEEEEEECCCCCHHHHCCCCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCCEE
VLSLGPDRVVEGIKKALAMGCDRGIHVQDSASQLKDPWQIASAIAASARGENYDLIFTGL
EEECCHHHHHHHHHHHHHHCCCCCCEECCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECC
QSQDRGSAQVGTMVAELLEYSCATTVIGFEYAEGSVTVKRELEGGLRAVVRLKTPALVTC
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEHHHHCCHHHEEEEECCCEEEEE
QLGLNQPRYPTLPNIMKAKKKEILTVPVSELLHEEPRTVMAGFYAPAKKGTGVVLEGDVA
EECCCCCCCCCCHHHHHHHHHHEEEECHHHHHHCCCCHHHHHCCCCCCCCCCEEEECCHH
DQVDKLIGILKDKTGLLR
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]