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The map label for this gene is rimP

Identifier: 197117687

GI number: 197117687

Start: 1501424

End: 1501906

Strand: Direct

Name: rimP

Synonym: Gbem_1299

Alternate gene names: 197117687

Gene position: 1501424-1501906 (Clockwise)

Preceding gene: 197117684

Following gene: 197117688

Centisome position: 32.53

GC content: 59.63

Gene sequence:

>483_bases
ATGGCGAAGGTCGACGTAGTAGAAAGAGTAACTGAGATTATTGCGGAAGTGGGCGCCCCGCTCGGCATCGAACTGGTCGA
CCTGGAGTACAAGCGCGAGGGGCGCGATATGGTGGTGCGGGTTTTCCTGGAGAAGCGGGAAGGGGGCATCAACCTGGACG
ACTGCGCCGACGTGAGCCGGCAGCTCTCCGACATCCTCGACGTGGAAGATTTCATGCCGGAGCGTTACACGCTGGAGGTT
TCCTCCCCCGGCATATGCCGACCGCTGAAGAAGGTGGCGGATTACGAGCGTTTCCTCGGGCACCTGATTAAGGTGAAGAC
CTTCGAGATGCTCGCCGACGAAGCCGGCAACAAGCGCAAGACCTTTACCGGGAAGCTCACCGGCATAGCGGACGGCGTGA
TCGGCATCGATCTCACCGAGGGGCAAAAGGCCCGCGTCCCTTTGGACAAGGTGGCCAAGGCGAACCTGGAATTCGAATTC
TAA

Upstream 100 bases:

>100_bases
TTGCATAAAGAACTCTTCCATGCTAAATATTGGGCACATGTTAACGTTCACTCAAAAGTGAGCTCCTCCGGCTCGCTTTT
TTTTATGGGAAATCCTTGAG

Downstream 100 bases:

>100_bases
AAATTGACTATACCTAGCAAGTGAAGGAGACCGTGACGTGGAAACAAGCTTTAACCTCAAGCACACGATCGACCAGATCG
TAAAAGAGAAGGGGATCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSRQLSDILDVEDFMPERYTLEV
SSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRKTFTGKLTGIADGVIGIDLTEGQKARVPLDKVAKANLEFEF

Sequences:

>Translated_160_residues
MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSRQLSDILDVEDFMPERYTLEV
SSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRKTFTGKLTGIADGVIGIDLTEGQKARVPLDKVAKANLEFEF
>Mature_159_residues
AKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSRQLSDILDVEDFMPERYTLEVS
SPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRKTFTGKLTGIADGVIGIDLTEGQKARVPLDKVAKANLEFEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=153, Percent_Identity=39.8692810457516, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_GEOBB (B5EI54)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002138114.1
- ProteinModelPortal:   B5EI54
- SMR:   B5EI54
- GeneID:   6781286
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_1299
- HOGENOM:   HBG668072
- OMA:   ISPDPFP
- ProtClustDB:   PRK14647
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17888; Mature: 17757

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSR
CCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRK
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TFTGKLTGIADGVIGIDLTEGQKARVPLDKVAKANLEFEF
EEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
AKVDVVERVTEIIAEVGAPLGIELVDLEYKREGRDMVVRVFLEKREGGINLDDCADVSR
CCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
QLSDILDVEDFMPERYTLEVSSPGICRPLKKVADYERFLGHLIKVKTFEMLADEAGNKRK
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TFTGKLTGIADGVIGIDLTEGQKARVPLDKVAKANLEFEF
EEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA