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The map label for this gene is ctpA-2 [H]

Identifier: 197117678

GI number: 197117678

Start: 1487663

End: 1488997

Strand: Direct

Name: ctpA-2 [H]

Synonym: Gbem_1290

Alternate gene names: 197117678

Gene position: 1487663-1488997 (Clockwise)

Preceding gene: 197117677

Following gene: 197117679

Centisome position: 32.23

GC content: 60.67

Gene sequence:

>1335_bases
ATGTTCAAAGGCAGCAAATTTAAGAAGACAACGCTGTTTGTCACAACCGTGTGCCTGCTGACGCTGGTGATCGGCTTCGG
CATGCAACGCAGATGCGCCGCCCAGGGGGGCGGCAGCGATTACCAGTCCATCGAGTTGTTCACGGACGTTCTGGCCATCG
TCAAGAAGAGCTACGTAGAAGAGGTCGACACCAAGAAGCTCGTGTACGGTGCCATCAACGGCATGCTCTCCTCGCTGGAC
CCCCACAGCTCCTTCATGCCCCCTGAAACCTACAAGGAAATGAAGATCGACACCAAGGGCTCCTTCGGCGGTCTCGGCAT
AGAGATCACGGTCAAGGAAGGGATCCTCACCGTCATCTCCCCGATAGAGGACACCCCCGCCTTCAAGGCCGGCGTCAAGG
CCGGCGACCAGATCCTGAAGATCGACGACAAGTTCACCAAGGACCTCACCATCACCGATGCGGTGAAGAGGATGAGGGGG
GTGAAAGGGACCAAGGTCACCCTCACCATCATGCGTGAAGGGTTCGACAAGACGAAGGAATTCGTGCTGGAGCGCGACAT
CATCCAGGTCAAGAGCGTTAAGCACAAGGTGCTCGACGACGGCTACGGCTACGTGAGGATTGCCCAGTTCCAGGAGAAGA
CCGACGACGACCTGGAGAAGGCGCTGCAGGCCCTTCAGGGCGAGCAGAAGCAGCTCAAGGGGCTGGTGCTCGACCTGCGC
AACGATCCGGGCGGGCTCCTGGACCAGGCGGTCCGGGTGAGCGAGCACTGGATCGCCGAAGGGAAGCTGGTCGTTTATAC
CGAGGGACGCGAGAAGGATTCCCAGATGCGCTTCACCTCCCGTAAGGGGCCCAAGCAGCCGGACTACCCGATCGTGGTGC
TGATCAACAGCGGTTCCGCGAGCGCCTCGGAGATCGTCGCCGGCTGCCTGCAGGACCACAAGCGCGCCGTTGTCATGGGG
ACCCAGAGCTTCGGCAAGGGGAGCGTCCAGACCATCATCCCGCTCGCCGACAACTCGGGCCTGAGGCTCACCACCGCCAG
GTACTTCACGCCCAGCGGCCGCTCCATCCAGGCTAAGGGGATAACCCCCGATATCGTCGCCGAGAAGGTCGATCTTGCCG
CCACCAGCGAGAAGCGCGAAGGGATGCACATCAGGGAGAAGGACCTCGAGAACCACTTCGAAGGGGATAAAAAGGAGGGG
GGCGAGGAGAAGAAGGATAAGCCGGCTCCCTACAAGACCGACGAACTGATCAAGAGCGACTCGCAGGTGCTGCGCGCGCT
CGACCTCCTGAAAGGGTGGGAGATCCTGAAGACGATGGGCAAACTCCCCTCCTGA

Upstream 100 bases:

>100_bases
CCGATGCTTTATTTCGAGATCAGATACCAGGGGAAACCAGTCGATCCCTCCCCCTGGTTCAGATAAGCAGGGTACCGCAA
CAAAATCCTAGGGAGGCAAA

Downstream 100 bases:

>100_bases
TGGACCGGAGACAATAAAGCATAAGAAAGGAAGGAATAGTACCGCTATTCCTTCCTTTTTTTATGCCCGGGGACTGTATG
AGACGTGTCTTGACAGTTCA

Product: carboxy-terminal processing protease lipoprotein

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MFKGSKFKKTTLFVTTVCLLTLVIGFGMQRRCAAQGGGSDYQSIELFTDVLAIVKKSYVEEVDTKKLVYGAINGMLSSLD
PHSSFMPPETYKEMKIDTKGSFGGLGIEITVKEGILTVISPIEDTPAFKAGVKAGDQILKIDDKFTKDLTITDAVKRMRG
VKGTKVTLTIMREGFDKTKEFVLERDIIQVKSVKHKVLDDGYGYVRIAQFQEKTDDDLEKALQALQGEQKQLKGLVLDLR
NDPGGLLDQAVRVSEHWIAEGKLVVYTEGREKDSQMRFTSRKGPKQPDYPIVVLINSGSASASEIVAGCLQDHKRAVVMG
TQSFGKGSVQTIIPLADNSGLRLTTARYFTPSGRSIQAKGITPDIVAEKVDLAATSEKREGMHIREKDLENHFEGDKKEG
GEEKKDKPAPYKTDELIKSDSQVLRALDLLKGWEILKTMGKLPS

Sequences:

>Translated_444_residues
MFKGSKFKKTTLFVTTVCLLTLVIGFGMQRRCAAQGGGSDYQSIELFTDVLAIVKKSYVEEVDTKKLVYGAINGMLSSLD
PHSSFMPPETYKEMKIDTKGSFGGLGIEITVKEGILTVISPIEDTPAFKAGVKAGDQILKIDDKFTKDLTITDAVKRMRG
VKGTKVTLTIMREGFDKTKEFVLERDIIQVKSVKHKVLDDGYGYVRIAQFQEKTDDDLEKALQALQGEQKQLKGLVLDLR
NDPGGLLDQAVRVSEHWIAEGKLVVYTEGREKDSQMRFTSRKGPKQPDYPIVVLINSGSASASEIVAGCLQDHKRAVVMG
TQSFGKGSVQTIIPLADNSGLRLTTARYFTPSGRSIQAKGITPDIVAEKVDLAATSEKREGMHIREKDLENHFEGDKKEG
GEEKKDKPAPYKTDELIKSDSQVLRALDLLKGWEILKTMGKLPS
>Mature_444_residues
MFKGSKFKKTTLFVTTVCLLTLVIGFGMQRRCAAQGGGSDYQSIELFTDVLAIVKKSYVEEVDTKKLVYGAINGMLSSLD
PHSSFMPPETYKEMKIDTKGSFGGLGIEITVKEGILTVISPIEDTPAFKAGVKAGDQILKIDDKFTKDLTITDAVKRMRG
VKGTKVTLTIMREGFDKTKEFVLERDIIQVKSVKHKVLDDGYGYVRIAQFQEKTDDDLEKALQALQGEQKQLKGLVLDLR
NDPGGLLDQAVRVSEHWIAEGKLVVYTEGREKDSQMRFTSRKGPKQPDYPIVVLINSGSASASEIVAGCLQDHKRAVVMG
TQSFGKGSVQTIIPLADNSGLRLTTARYFTPSGRSIQAKGITPDIVAEKVDLAATSEKREGMHIREKDLENHFEGDKKEG
GEEKKDKPAPYKTDELIKSDSQVLRALDLLKGWEILKTMGKLPS

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=321, Percent_Identity=29.9065420560748, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49015; Mature: 49015

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKGSKFKKTTLFVTTVCLLTLVIGFGMQRRCAAQGGGSDYQSIELFTDVLAIVKKSYVE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
EVDTKKLVYGAINGMLSSLDPHSSFMPPETYKEMKIDTKGSFGGLGIEITVKEGILTVIS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCEECCCCCCCCEEEEEEECCCEEEECC
PIEDTPAFKAGVKAGDQILKIDDKFTKDLTITDAVKRMRGVKGTKVTLTIMREGFDKTKE
CCCCCCCHHHHCCCCCEEEEECCHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
FVLERDIIQVKSVKHKVLDDGYGYVRIAQFQEKTDDDLEKALQALQGEQKQLKGLVLDLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHCCCHHHHCEEEEEEC
NDPGGLLDQAVRVSEHWIAEGKLVVYTEGREKDSQMRFTSRKGPKQPDYPIVVLINSGSA
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCC
SASEIVAGCLQDHKRAVVMGTQSFGKGSVQTIIPLADNSGLRLTTARYFTPSGRSIQAKG
CHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECC
ITPDIVAEKVDLAATSEKREGMHIREKDLENHFEGDKKEGGEEKKDKPAPYKTDELIKSD
CCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SQVLRALDLLKGWEILKTMGKLPS
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFKGSKFKKTTLFVTTVCLLTLVIGFGMQRRCAAQGGGSDYQSIELFTDVLAIVKKSYVE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
EVDTKKLVYGAINGMLSSLDPHSSFMPPETYKEMKIDTKGSFGGLGIEITVKEGILTVIS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCEECCCCCCCCEEEEEEECCCEEEECC
PIEDTPAFKAGVKAGDQILKIDDKFTKDLTITDAVKRMRGVKGTKVTLTIMREGFDKTKE
CCCCCCCHHHHCCCCCEEEEECCHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
FVLERDIIQVKSVKHKVLDDGYGYVRIAQFQEKTDDDLEKALQALQGEQKQLKGLVLDLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHCCCHHHHCEEEEEEC
NDPGGLLDQAVRVSEHWIAEGKLVVYTEGREKDSQMRFTSRKGPKQPDYPIVVLINSGSA
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCC
SASEIVAGCLQDHKRAVVMGTQSFGKGSVQTIIPLADNSGLRLTTARYFTPSGRSIQAKG
CHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEECC
ITPDIVAEKVDLAATSEKREGMHIREKDLENHFEGDKKEGGEEKKDKPAPYKTDELIKSD
CCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SQVLRALDLLKGWEILKTMGKLPS
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]