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The map label for this gene is yibP [H]

Identifier: 197117677

GI number: 197117677

Start: 1486435

End: 1487628

Strand: Direct

Name: yibP [H]

Synonym: Gbem_1289

Alternate gene names: 197117677

Gene position: 1486435-1487628 (Clockwise)

Preceding gene: 197117676

Following gene: 197117678

Centisome position: 32.21

GC content: 55.44

Gene sequence:

>1194_bases
ATGCGTCACATTCTACTGATAAGCTGTCTGGCCCTGATTTTGGCCCCTTCCCTTTGCGGCGCGGGGGCCAAGGAAGAGCT
GCAGACCATAAAGAAACAGATCAAGGAAAAGAACCGGCTCATCTCGAAAACCCAGAAGGTGGAGACCAAGGTTTCGGGAG
AGTTGGTGCAGATCCAGAAAACCCTGGCCGAGAAGCAGTCGAGCCTGGTTTCCTTGGGGCGCGACTTGGCCTCCGTGGAA
AAGGGAATCGACAAGACGCTCGTGGACATAGAGAGCGAGCGCCAGGAGGCCGAGCGCAAGCGGGCTCAGATCAACCGCCG
CGTCGCCGCCCTCTACAAGGGAGGGGATACCGGGAACCTCAGGGTGTTCTTCTCCTCGGAGTCTTTCCCGCAGATGACAG
AGAACCTCCGCTACATGCGGAGCATACTGGAGAACGACCGGAAACTCTTTCAGCAGTACAACGAGAACCTGCAGCGGCTG
AACCTGTTGAAGCAGCAACTTGAGCAGGACGCGACGCGCAAGGAAGGGATCCGGCGCAACATAGAGGCGAAGAAGCGCGA
GATAGAGCAAGAGAAGAGCAAGAAGGCGAACTACCTGGTCAAAGTGAGGCAGGACAAGCAGCAGTACCAGGCTTCACTCA
AAGAATTGCAGGCCAATGCGGGACGCCTGCAGAGCATGATCCAAAAGCTTGAAGCGAGAAGTAGAAAAGCGTATAGTTCC
AAGGCTCGCGGTAAAGCGGGAGATAATAAGGCGCAAGTCGTCTCTCCGAGGTCCGTCGCGGTCCCGAACCAGGGGCTCGG
GGCGCAGAAGGGAAGGCTCTCCTTGCCGGTGAAGGGGACCATCGTGGACCGCTACGGCAGGCACAAGCATCCTGAGTTCG
ATTCCTTCACTGTCAGTAACGGCATTTCTGTATCTGCGCCAGCCGGATCCGCCATTCACGCGATCTATGACGGCGAAGTG
ATTTTTGCGAACTATTTCAAAGGCTATGGTAATATGATCATCGTCGATCACGGGGACGGGTTCTTCAGTCTTTACGCCCA
TGCTTCATCGATGACGAAAAAGGTCGGGGCGAAGGTATCAAAGAACGAAGTCCTGGCCAGTGTGGGTGACGTTGATTCAA
GCAAAGGGCCGATGCTTTATTTCGAGATCAGATACCAGGGGAAACCAGTCGATCCCTCCCCCTGGTTCAGATAA

Upstream 100 bases:

>100_bases
TTTCTTCCCCCCTCGCACCTGGCTGGGGTAGTACTGGGAGGCGTGCTGCTCGGTTTCATCGGCAGCGCGACCTCGCTGAA
GAGGTTCATAAACGTCTAGC

Downstream 100 bases:

>100_bases
GCAGGGTACCGCAACAAAATCCTAGGGAGGCAAAATGTTCAAAGGCAGCAAATTTAAGAAGACAACGCTGTTTGTCACAA
CCGTGTGCCTGCTGACGCTG

Product: membrane-bound metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRHILLISCLALILAPSLCGAGAKEELQTIKKQIKEKNRLISKTQKVETKVSGELVQIQKTLAEKQSSLVSLGRDLASVE
KGIDKTLVDIESERQEAERKRAQINRRVAALYKGGDTGNLRVFFSSESFPQMTENLRYMRSILENDRKLFQQYNENLQRL
NLLKQQLEQDATRKEGIRRNIEAKKREIEQEKSKKANYLVKVRQDKQQYQASLKELQANAGRLQSMIQKLEARSRKAYSS
KARGKAGDNKAQVVSPRSVAVPNQGLGAQKGRLSLPVKGTIVDRYGRHKHPEFDSFTVSNGISVSAPAGSAIHAIYDGEV
IFANYFKGYGNMIIVDHGDGFFSLYAHASSMTKKVGAKVSKNEVLASVGDVDSSKGPMLYFEIRYQGKPVDPSPWFR

Sequences:

>Translated_397_residues
MRHILLISCLALILAPSLCGAGAKEELQTIKKQIKEKNRLISKTQKVETKVSGELVQIQKTLAEKQSSLVSLGRDLASVE
KGIDKTLVDIESERQEAERKRAQINRRVAALYKGGDTGNLRVFFSSESFPQMTENLRYMRSILENDRKLFQQYNENLQRL
NLLKQQLEQDATRKEGIRRNIEAKKREIEQEKSKKANYLVKVRQDKQQYQASLKELQANAGRLQSMIQKLEARSRKAYSS
KARGKAGDNKAQVVSPRSVAVPNQGLGAQKGRLSLPVKGTIVDRYGRHKHPEFDSFTVSNGISVSAPAGSAIHAIYDGEV
IFANYFKGYGNMIIVDHGDGFFSLYAHASSMTKKVGAKVSKNEVLASVGDVDSSKGPMLYFEIRYQGKPVDPSPWFR
>Mature_397_residues
MRHILLISCLALILAPSLCGAGAKEELQTIKKQIKEKNRLISKTQKVETKVSGELVQIQKTLAEKQSSLVSLGRDLASVE
KGIDKTLVDIESERQEAERKRAQINRRVAALYKGGDTGNLRVFFSSESFPQMTENLRYMRSILENDRKLFQQYNENLQRL
NLLKQQLEQDATRKEGIRRNIEAKKREIEQEKSKKANYLVKVRQDKQQYQASLKELQANAGRLQSMIQKLEARSRKAYSS
KARGKAGDNKAQVVSPRSVAVPNQGLGAQKGRLSLPVKGTIVDRYGRHKHPEFDSFTVSNGISVSAPAGSAIHAIYDGEV
IFANYFKGYGNMIIVDHGDGFFSLYAHASSMTKKVGAKVSKNEVLASVGDVDSSKGPMLYFEIRYQGKPVDPSPWFR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=411, Percent_Identity=26.2773722627737, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=34.453781512605, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87082174, Length=93, Percent_Identity=35.4838709677419, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44508; Mature: 44508

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHILLISCLALILAPSLCGAGAKEELQTIKKQIKEKNRLISKTQKVETKVSGELVQIQK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAEKQSSLVSLGRDLASVEKGIDKTLVDIESERQEAERKRAQINRRVAALYKGGDTGNL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
RVFFSSESFPQMTENLRYMRSILENDRKLFQQYNENLQRLNLLKQQLEQDATRKEGIRRN
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAKKREIEQEKSKKANYLVKVRQDKQQYQASLKELQANAGRLQSMIQKLEARSRKAYSS
HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARGKAGDNKAQVVSPRSVAVPNQGLGAQKGRLSLPVKGTIVDRYGRHKHPEFDSFTVSN
HCCCCCCCCCCEEECCCCEECCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCEEECC
GISVSAPAGSAIHAIYDGEVIFANYFKGYGNMIIVDHGDGFFSLYAHASSMTKKVGAKVS
CCEEECCCCCEEEEEECCCEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
KNEVLASVGDVDSSKGPMLYFEIRYQGKPVDPSPWFR
HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRHILLISCLALILAPSLCGAGAKEELQTIKKQIKEKNRLISKTQKVETKVSGELVQIQK
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAEKQSSLVSLGRDLASVEKGIDKTLVDIESERQEAERKRAQINRRVAALYKGGDTGNL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
RVFFSSESFPQMTENLRYMRSILENDRKLFQQYNENLQRLNLLKQQLEQDATRKEGIRRN
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAKKREIEQEKSKKANYLVKVRQDKQQYQASLKELQANAGRLQSMIQKLEARSRKAYSS
HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARGKAGDNKAQVVSPRSVAVPNQGLGAQKGRLSLPVKGTIVDRYGRHKHPEFDSFTVSN
HCCCCCCCCCCEEECCCCEECCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCEEECC
GISVSAPAGSAIHAIYDGEVIFANYFKGYGNMIIVDHGDGFFSLYAHASSMTKKVGAKVS
CCEEECCCCCEEEEEECCCEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
KNEVLASVGDVDSSKGPMLYFEIRYQGKPVDPSPWFR
HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]