Click here to switch to the map view.

The map label for this gene is 197117640

Identifier: 197117640

GI number: 197117640

Start: 1448303

End: 1448725

Strand: Reverse

Name: 197117640

Synonym: Gbem_1252

Alternate gene names: NA

Gene position: 1448725-1448303 (Counterclockwise)

Preceding gene: 197117642

Following gene: 197117639

Centisome position: 31.39

GC content: 55.32

Gene sequence:

>423_bases
ATGGCGGTAGGGTGGCAGGACAACCTGAGCATCGGCGTGTTAGAGGTAGACATTCAGCACAAGCTTCTCTTTGACAAATT
CAACAGCTTCCTGAACGCGTACGCCGCCGACGGCAATACCGACCAAACGCTGCAGATGTTCTGGTTTCTGGAAGCGTATG
CCGTCACGCACTTCAATGAAGAAGAGAAACTGATGCTGCAGGCAGGTTATCCTGCACTCCCGGCCCACCGGCAGAAGCAC
CAGGCTTTCATCGACCAGATCAACCAGTTGAAAGAGCGCCTCAAGGTGGAAGGCCTGAACCAGGCGCTGGTCACCGCTAT
GACCAGCTTCATAACCTCGTGGCTGATACAGCACATCTCCACCGAAGACCGCGCCATCGGCGACTTCATCAACAAAAGGC
CGGCAGGATACGTCTCGGCATAG

Upstream 100 bases:

>100_bases
TACTTCGCGGCCAGATCAGCACAACATTAAACCTTGATAAGCGACAAGATCATGCGCTATAAGAGTAGGGCTGTTTACTG
GAACATTAGCAGGAGGCAAT

Downstream 100 bases:

>100_bases
CTGGCGCCGCCGCGCGGCTTACGGCAAAGCCAAAGCCGGCATCTTCCCGCTGCCACCTCCCGTCCAGATTCGGCGTCTCA
ACCTTGAACGTCGAACCTTG

Product: hemerythrin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAVGWQDNLSIGVLEVDIQHKLLFDKFNSFLNAYAADGNTDQTLQMFWFLEAYAVTHFNEEEKLMLQAGYPALPAHRQKH
QAFIDQINQLKERLKVEGLNQALVTAMTSFITSWLIQHISTEDRAIGDFINKRPAGYVSA

Sequences:

>Translated_140_residues
MAVGWQDNLSIGVLEVDIQHKLLFDKFNSFLNAYAADGNTDQTLQMFWFLEAYAVTHFNEEEKLMLQAGYPALPAHRQKH
QAFIDQINQLKERLKVEGLNQALVTAMTSFITSWLIQHISTEDRAIGDFINKRPAGYVSA
>Mature_139_residues
AVGWQDNLSIGVLEVDIQHKLLFDKFNSFLNAYAADGNTDQTLQMFWFLEAYAVTHFNEEEKLMLQAGYPALPAHRQKHQ
AFIDQINQLKERLKVEGLNQALVTAMTSFITSWLIQHISTEDRAIGDFINKRPAGYVSA

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 15959; Mature: 15828

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGWQDNLSIGVLEVDIQHKLLFDKFNSFLNAYAADGNTDQTLQMFWFLEAYAVTHFNE
CCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
EEKLMLQAGYPALPAHRQKHQAFIDQINQLKERLKVEGLNQALVTAMTSFITSWLIQHIS
CHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
TEDRAIGDFINKRPAGYVSA
CCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AVGWQDNLSIGVLEVDIQHKLLFDKFNSFLNAYAADGNTDQTLQMFWFLEAYAVTHFNE
CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
EEKLMLQAGYPALPAHRQKHQAFIDQINQLKERLKVEGLNQALVTAMTSFITSWLIQHIS
CHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
TEDRAIGDFINKRPAGYVSA
CCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA