| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is exeA [H]
Identifier: 197117605
GI number: 197117605
Start: 1409080
End: 1410690
Strand: Direct
Name: exeA [H]
Synonym: Gbem_1217
Alternate gene names: 197117605
Gene position: 1409080-1410690 (Clockwise)
Preceding gene: 197117604
Following gene: 197117606
Centisome position: 30.53
GC content: 65.36
Gene sequence:
>1611_bases ATGTACTGGGAATCTTTCGGCTTCAAAGAGGCGCCTTTCGCGCTTACCCCCAACCCCTCGTTCCTGTTCCTAAGTTCTCC GCACCAGGAGGCGTTCGCGCACCTGCTCTTCGCCATCGAGAGCCGGGCCGGTTTCATCGAGCTTTCGGGCGAGGTGGGTA CCGGCAAGACGACCATCGTGCGCACGCTGTTGAACCAGCTCGACCCGGAGACCCACCGCACCGCGCTCATCTTCAACCCG ACGCTTTCGCCACTGGGGCTTTTGCAGGAGGTCAACTCGGAGTTCGGGCTCGACTGCGTGAGCCACGACATGCGCGAGCT GCACACCACCCTGAACGCCTATCTGCTGGAGGAGAACCGCGCCGGCCGCACCGTGGTGCTGGTGATCGACGAGGCGCAGA ACCTCTCGGTAGAGGTGCTGGAGCAGGTCCGGCTCATCTCCAACCTGGAGACGGACAGCGACAAACTGATCCAGATCGTG CTGGTGGGGCAGCCGGAATTGAACGCGCTCCTGTCGCGGGAGGAACTGAGGCAGCTGGACCAGCGCATCACGGTGCGCTA CCACCTGAAGCCCATGTCTTTCGACGATACCTGCGCCTATGTCCGGCACCGGATCCGGTTCGCCGCCGACGGGCGGGAAC CGCTTACCTTCTCGCAGGGCGCATTCAAGAAGATCTTCAGCTTCTCCGGCGGTTTGCCGCGCCTCATCAACGGGGTCTGC GACCGTGCCCTGCTGCTCGCCTACACCAAGGAGTGCAAGGAGGTTTCAACCGAAATGGCGGCTCTTGCCATAGCCGATCT GCGCAGGTCGCTGCCCCGCAGGCGGCGTGCCGTACCGATGAAGGCCCTGTCTGCCGGGGTGGCGCTCTGCATCCTGGCGA TTGCCGCCTTCTCGATATTCTCCGGGTCGCTGCTACGCCAGAAACCTGCCGCCTTGCACCCCCCTCCCGCACTGTCGCGC GAAGCGGCGCTCGCAGGGCTTGCTGCCTCCTCCGAACAGCAGAACCTGCTCGCCTCTGTCAACGCGGTGCTGGCGGCGTG GCAGGCCCCGGCGGCTGTTGCCACCACGGGGCAGCCGGCGACGCTGCGCGGGCTTGCCCGCCAGCGCGGGATGACGGCGA CGAAAGTGACCGGGAACCTCGACACGCTGGCGCGCCTGGACGCCCCGGCGCTGCTCCATGTAGCCGTTCCGGGGGGAGGC GAGAGGCTCATAGCCCTCTTGAAGGTCGACCGTGACGAGGTCGGCGTGGCGCCGGCCGTGGCGGGAAAAGATAGGCTCAC CAAAGCGGAGCTCGCGCAGATCTGGAGCGGCGGCGCCACCTTGCTCTGGAAGGATTTCCATGGCATCTCCTCGCGCGGCA AAGCTAGTGAGAAGGCGGCCGGGGTGAAACTGCTGCAGGGGCTCTTGAAACAAGTCGGCTGCTACGACGGCGCCGTTAAC GGAGAACTCAGCGACAAGACCCAGGCGGCTGTCGCCGAATTCCAGCGCCGGGAGCAGTTGACCGCGGACGGGAAGCTGGG GGGGCAGACCCTGATGATGCTGTATCGGCGCGCCGGAGGTTTTTTCCCGCCGGGGCTGCAAACCTTGACCCACAACCAGG GGCGAATCTAG
Upstream 100 bases:
>100_bases CAGTAATTGCTTGACACTCCCGTCCCAAATACCTATAGACTAATGGCTCGTTTTTCCACCCGAATCCTTTTCCCCCCCTC GCCGGGGCCTATGGGGATAT
Downstream 100 bases:
>100_bases ATGAGTCTGATCCTCGATGCCTTAAGAAAAATGGAACAGGAGCGCAGGAGCCGGCGCGGCGCCGCGAACGACCTGCGCCC GGAGGTGCTCCGCTACCACC
Product: peptidoglycan-binding ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MYWESFGFKEAPFALTPNPSFLFLSSPHQEAFAHLLFAIESRAGFIELSGEVGTGKTTIVRTLLNQLDPETHRTALIFNP TLSPLGLLQEVNSEFGLDCVSHDMRELHTTLNAYLLEENRAGRTVVLVIDEAQNLSVEVLEQVRLISNLETDSDKLIQIV LVGQPELNALLSREELRQLDQRITVRYHLKPMSFDDTCAYVRHRIRFAADGREPLTFSQGAFKKIFSFSGGLPRLINGVC DRALLLAYTKECKEVSTEMAALAIADLRRSLPRRRRAVPMKALSAGVALCILAIAAFSIFSGSLLRQKPAALHPPPALSR EAALAGLAASSEQQNLLASVNAVLAAWQAPAAVATTGQPATLRGLARQRGMTATKVTGNLDTLARLDAPALLHVAVPGGG ERLIALLKVDRDEVGVAPAVAGKDRLTKAELAQIWSGGATLLWKDFHGISSRGKASEKAAGVKLLQGLLKQVGCYDGAVN GELSDKTQAAVAEFQRREQLTADGKLGGQTLMMLYRRAGGFFPPGLQTLTHNQGRI
Sequences:
>Translated_536_residues MYWESFGFKEAPFALTPNPSFLFLSSPHQEAFAHLLFAIESRAGFIELSGEVGTGKTTIVRTLLNQLDPETHRTALIFNP TLSPLGLLQEVNSEFGLDCVSHDMRELHTTLNAYLLEENRAGRTVVLVIDEAQNLSVEVLEQVRLISNLETDSDKLIQIV LVGQPELNALLSREELRQLDQRITVRYHLKPMSFDDTCAYVRHRIRFAADGREPLTFSQGAFKKIFSFSGGLPRLINGVC DRALLLAYTKECKEVSTEMAALAIADLRRSLPRRRRAVPMKALSAGVALCILAIAAFSIFSGSLLRQKPAALHPPPALSR EAALAGLAASSEQQNLLASVNAVLAAWQAPAAVATTGQPATLRGLARQRGMTATKVTGNLDTLARLDAPALLHVAVPGGG ERLIALLKVDRDEVGVAPAVAGKDRLTKAELAQIWSGGATLLWKDFHGISSRGKASEKAAGVKLLQGLLKQVGCYDGAVN GELSDKTQAAVAEFQRREQLTADGKLGGQTLMMLYRRAGGFFPPGLQTLTHNQGRI >Mature_536_residues MYWESFGFKEAPFALTPNPSFLFLSSPHQEAFAHLLFAIESRAGFIELSGEVGTGKTTIVRTLLNQLDPETHRTALIFNP TLSPLGLLQEVNSEFGLDCVSHDMRELHTTLNAYLLEENRAGRTVVLVIDEAQNLSVEVLEQVRLISNLETDSDKLIQIV LVGQPELNALLSREELRQLDQRITVRYHLKPMSFDDTCAYVRHRIRFAADGREPLTFSQGAFKKIFSFSGGLPRLINGVC DRALLLAYTKECKEVSTEMAALAIADLRRSLPRRRRAVPMKALSAGVALCILAIAAFSIFSGSLLRQKPAALHPPPALSR EAALAGLAASSEQQNLLASVNAVLAAWQAPAAVATTGQPATLRGLARQRGMTATKVTGNLDTLARLDAPALLHVAVPGGG ERLIALLKVDRDEVGVAPAVAGKDRLTKAELAQIWSGGATLLWKDFHGISSRGKASEKAAGVKLLQGLLKQVGCYDGAVN GELSDKTQAAVAEFQRREQLTADGKLGGQTLMMLYRRAGGFFPPGLQTLTHNQGRI
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 58083; Mature: 58083
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50990 PEPTIDASE_C39
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYWESFGFKEAPFALTPNPSFLFLSSPHQEAFAHLLFAIESRAGFIELSGEVGTGKTTIV CCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH RTLLNQLDPETHRTALIFNPTLSPLGLLQEVNSEFGLDCVSHDMRELHTTLNAYLLEENR HHHHHHCCCCHHCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC AGRTVVLVIDEAQNLSVEVLEQVRLISNLETDSDKLIQIVLVGQPELNALLSREELRQLD CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHCHHHHHHHH QRITVRYHLKPMSFDDTCAYVRHRIRFAADGREPLTFSQGAFKKIFSFSGGLPRLINGVC HHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCHHHHHHHHH DRALLLAYTKECKEVSTEMAALAIADLRRSLPRRRRAVPMKALSAGVALCILAIAAFSIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SGSLLRQKPAALHPPPALSREAALAGLAASSEQQNLLASVNAVLAAWQAPAAVATTGQPA CCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCH TLRGLARQRGMTATKVTGNLDTLARLDAPALLHVAVPGGGERLIALLKVDRDEVGVAPAV HHHHHHHHCCCEEEEECCCHHHHHHCCCCEEEEEECCCCCHHEEEEEEECCHHCCCCCCC AGKDRLTKAELAQIWSGGATLLWKDFHGISSRGKASEKAAGVKLLQGLLKQVGCYDGAVN CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GELSDKTQAAVAEFQRREQLTADGKLGGQTLMMLYRRAGGFFPPGLQTLTHNQGRI CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCC >Mature Secondary Structure MYWESFGFKEAPFALTPNPSFLFLSSPHQEAFAHLLFAIESRAGFIELSGEVGTGKTTIV CCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH RTLLNQLDPETHRTALIFNPTLSPLGLLQEVNSEFGLDCVSHDMRELHTTLNAYLLEENR HHHHHHCCCCHHCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC AGRTVVLVIDEAQNLSVEVLEQVRLISNLETDSDKLIQIVLVGQPELNALLSREELRQLD CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHCHHHHHHHH QRITVRYHLKPMSFDDTCAYVRHRIRFAADGREPLTFSQGAFKKIFSFSGGLPRLINGVC HHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCCCHHHHHHHHH DRALLLAYTKECKEVSTEMAALAIADLRRSLPRRRRAVPMKALSAGVALCILAIAAFSIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SGSLLRQKPAALHPPPALSREAALAGLAASSEQQNLLASVNAVLAAWQAPAAVATTGQPA CCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCH TLRGLARQRGMTATKVTGNLDTLARLDAPALLHVAVPGGGERLIALLKVDRDEVGVAPAV HHHHHHHHCCCEEEEECCCHHHHHHCCCCEEEEEECCCCCHHEEEEEEECCHHCCCCCCC AGKDRLTKAELAQIWSGGATLLWKDFHGISSRGKASEKAAGVKLLQGLLKQVGCYDGAVN CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GELSDKTQAAVAEFQRREQLTADGKLGGQTLMMLYRRAGGFFPPGLQTLTHNQGRI CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]