| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117587
Identifier: 197117587
GI number: 197117587
Start: 1391777
End: 1392415
Strand: Direct
Name: 197117587
Synonym: Gbem_1199
Alternate gene names: NA
Gene position: 1391777-1392415 (Clockwise)
Preceding gene: 197117582
Following gene: 197117590
Centisome position: 30.16
GC content: 55.24
Gene sequence:
>639_bases ATGAGAATTCAAAAAGTAGGTATCGTCGGATCTGGAAACATTGGCGGCAACCTGGGTATTTTGCTTGCCAAGGCTGGGTG CGAAGTTTTCTTCAGTTCGAGGCATCCGGAGAATCTGCAGGATATGGTAGAAGCTGCCGGGCCGACAGCGCGAGCCGGGA AGGTGGGCGAAGCAATCGCATTTGGAGACGTGGTCATCCTTTCCGTGCCGCTGAAGGCATATCGGGAATTGGATGACGAA ACGAGGCTGGCGCTGAAAGGAAAGATCGTCATAGACACGTCGAACCCATATCCCGAGAGGGACGGGGCAATGGCGGTTGA GGCAAGGCAAGATCCCGGTGGCATGGGGAGTGTCGTGGCGCGTCTTCTCCCTGGAGCGAGAATCGTGCGGGCCTTCAATT CGGTGTACTTCGAGGATCTGAAGAAGACCGTGAATAAAAATGGGGAGACGATCGGCATCCCGATAGCAAGTGACGATCAG GAAGCGCTCGATGCCGCAGTTGAATTGGCTCAGAGAGCGGGCCTGGAGCCAGTCGTCGTCGGAGGTTTACACAGTTCCAA GCTTTTTGACGTTGGGACCCCCGTATATGCGTCCAGCGCCTCTGCACGGGAGATCAGACAGAAACTGAGAATAGAGTAG
Upstream 100 bases:
>100_bases AATGTTGGGTAAGGCTACGTGATGCCGCGTCGCCCCATTGCGAGCAACCGGGGGCGACCGTTTAGCGGACAAGGCGTGGT CAACATGAGGAGGAGCGGAA
Downstream 100 bases:
>100_bases GGGAGGCTTCGGTCAGGTTAGGGGGCGCAGACGAGTTGCCCGAATCACTAACCTGACCAAGTCCACTTTTATATTTCTCG GAGCAACTTTTGTATTTCCG
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; NADp Oxidoreductase Co; NADP Oxidoreductase; 3-Hydroxyisobutyrate Dehydrogenase Protein
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRIQKVGIVGSGNIGGNLGILLAKAGCEVFFSSRHPENLQDMVEAAGPTARAGKVGEAIAFGDVVILSVPLKAYRELDDE TRLALKGKIVIDTSNPYPERDGAMAVEARQDPGGMGSVVARLLPGARIVRAFNSVYFEDLKKTVNKNGETIGIPIASDDQ EALDAAVELAQRAGLEPVVVGGLHSSKLFDVGTPVYASSASAREIRQKLRIE
Sequences:
>Translated_212_residues MRIQKVGIVGSGNIGGNLGILLAKAGCEVFFSSRHPENLQDMVEAAGPTARAGKVGEAIAFGDVVILSVPLKAYRELDDE TRLALKGKIVIDTSNPYPERDGAMAVEARQDPGGMGSVVARLLPGARIVRAFNSVYFEDLKKTVNKNGETIGIPIASDDQ EALDAAVELAQRAGLEPVVVGGLHSSKLFDVGTPVYASSASAREIRQKLRIE >Mature_212_residues MRIQKVGIVGSGNIGGNLGILLAKAGCEVFFSSRHPENLQDMVEAAGPTARAGKVGEAIAFGDVVILSVPLKAYRELDDE TRLALKGKIVIDTSNPYPERDGAMAVEARQDPGGMGSVVARLLPGARIVRAFNSVYFEDLKKTVNKNGETIGIPIASDDQ EALDAAVELAQRAGLEPVVVGGLHSSKLFDVGTPVYASSASAREIRQKLRIE
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22440; Mature: 22440
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQKVGIVGSGNIGGNLGILLAKAGCEVFFSSRHPENLQDMVEAAGPTARAGKVGEAIA CCEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHH FGDVVILSVPLKAYRELDDETRLALKGKIVIDTSNPYPERDGAMAVEARQDPGGMGSVVA HCCEEEEECCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHH RLLPGARIVRAFNSVYFEDLKKTVNKNGETIGIPIASDDQEALDAAVELAQRAGLEPVVV HHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE GGLHSSKLFDVGTPVYASSASAREIRQKLRIE ECCCCCCEEECCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MRIQKVGIVGSGNIGGNLGILLAKAGCEVFFSSRHPENLQDMVEAAGPTARAGKVGEAIA CCEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHH FGDVVILSVPLKAYRELDDETRLALKGKIVIDTSNPYPERDGAMAVEARQDPGGMGSVVA HCCEEEEECCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHH RLLPGARIVRAFNSVYFEDLKKTVNKNGETIGIPIASDDQEALDAAVELAQRAGLEPVVV HHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE GGLHSSKLFDVGTPVYASSASAREIRQKLRIE ECCCCCCEEECCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA