| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117582
Identifier: 197117582
GI number: 197117582
Start: 1386241
End: 1387251
Strand: Direct
Name: 197117582
Synonym: Gbem_1194
Alternate gene names: NA
Gene position: 1386241-1387251 (Clockwise)
Preceding gene: 197117581
Following gene: 197117587
Centisome position: 30.04
GC content: 58.56
Gene sequence:
>1011_bases TTGCGATACGTAAAGCATTTCGTCGCCATCTCGTTATTACTGGGGGCTGTGGCAGGTCCCGTCAATGCCGATCCGCTTGT TATCAATCCCTTTTACACCTTCAATCAGTCCCCATTGGTCCAGATCTACGGGCTCCCTTCAGCTGAAAGTGCTACCGTTC AGCCAGTCGGGAAGGCTTTGGCACTGCTTTCCTTGGATGTCGCGAACACTTCCTATGACTGGGAGACGGCGCAGGAAAAA TTGATCCTTGACGGCGAGAGCGAGAGGATGACGCTTGCGCTACGCTATGGCATCGCCAGGGGGGTGGAACTGGGGATGGA TGTCCCGGTGGTGGCCTACAGCGGTGGCATATTCGACGGGTTCATCGAGGAGTGGCACAGATTTTTTGGCCTACCACAGG GGAGCCGGACCGAGACAAAGGAGGACCGTCTTCTCTTCGAGTATGACAAAAAAGGGCAGGAGCGGCTGAGGATGGATAAC TCCACCGTCCGCCTCGGTGATGTCAGGGTGTCTGGCGGCTGGCAGTTGTACCATGAGGGGGGCGTCAACCCCAAGGCGGT AGCGCTGCGGGCGAGCCTCAAGCTTCCCACCGGCAGCAGCTCCAGGCTGACCGGCAGCGGCAGCACGGACCTGGCCCTTT GGTTGAGCGGAAGCAGCGATTATTCTCTCTCCTGGGGACATGCGACCGTTTTCGGGGCGCTGGGTGGTATGGCAATGACC GACGGGCAGGTGCTGAAAGATCAGCGGGAGAATCTGGTAGGGTTTGGCAGTCTGGGCGCAGGGTGGTCCCCGATGGAAAA TTTCGCACTCAAGGTGGAGTTCTCTTCGCACACGCCCTTCTATAGCGACAGCGACATGAAGCCTTTGTCGTCTCCGGCTG TGGTCTTGTTGTTCGGCGGCACCTATGCCTTCTCACCGGTTACCGCGTTGGATATCGCCTTGGCCGAGGATCTCAATGTC GAGGCGTCCCCCGATGTGGCGCTTCACCTGGGACTCAGCCACCGCTTCTAA
Upstream 100 bases:
>100_bases GCATCCGGCACTTTTCATTGTTTTGCCGGTGTCGGTTCGTGTACCTTGTGTGTGGCTTGCTGGCTGAGCCTATGAATTCG TGGAAAGGAGGGAATATCTA
Downstream 100 bases:
>100_bases ATGGCCGGGGCTGCCTAATAGGGGGACTGGCTCCGCAAGGTGCCTGTCCCCCCGGATTTCGCCCCCCCCCTGGATTTATT GAGGCGCGGATGAGTGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRYVKHFVAISLLLGAVAGPVNADPLVINPFYTFNQSPLVQIYGLPSAESATVQPVGKALALLSLDVANTSYDWETAQEK LILDGESERMTLALRYGIARGVELGMDVPVVAYSGGIFDGFIEEWHRFFGLPQGSRTETKEDRLLFEYDKKGQERLRMDN STVRLGDVRVSGGWQLYHEGGVNPKAVALRASLKLPTGSSSRLTGSGSTDLALWLSGSSDYSLSWGHATVFGALGGMAMT DGQVLKDQRENLVGFGSLGAGWSPMENFALKVEFSSHTPFYSDSDMKPLSSPAVVLLFGGTYAFSPVTALDIALAEDLNV EASPDVALHLGLSHRF
Sequences:
>Translated_336_residues MRYVKHFVAISLLLGAVAGPVNADPLVINPFYTFNQSPLVQIYGLPSAESATVQPVGKALALLSLDVANTSYDWETAQEK LILDGESERMTLALRYGIARGVELGMDVPVVAYSGGIFDGFIEEWHRFFGLPQGSRTETKEDRLLFEYDKKGQERLRMDN STVRLGDVRVSGGWQLYHEGGVNPKAVALRASLKLPTGSSSRLTGSGSTDLALWLSGSSDYSLSWGHATVFGALGGMAMT DGQVLKDQRENLVGFGSLGAGWSPMENFALKVEFSSHTPFYSDSDMKPLSSPAVVLLFGGTYAFSPVTALDIALAEDLNV EASPDVALHLGLSHRF >Mature_336_residues MRYVKHFVAISLLLGAVAGPVNADPLVINPFYTFNQSPLVQIYGLPSAESATVQPVGKALALLSLDVANTSYDWETAQEK LILDGESERMTLALRYGIARGVELGMDVPVVAYSGGIFDGFIEEWHRFFGLPQGSRTETKEDRLLFEYDKKGQERLRMDN STVRLGDVRVSGGWQLYHEGGVNPKAVALRASLKLPTGSSSRLTGSGSTDLALWLSGSSDYSLSWGHATVFGALGGMAMT DGQVLKDQRENLVGFGSLGAGWSPMENFALKVEFSSHTPFYSDSDMKPLSSPAVVLLFGGTYAFSPVTALDIALAEDLNV EASPDVALHLGLSHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36289; Mature: 36289
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVKHFVAISLLLGAVAGPVNADPLVINPFYTFNQSPLVQIYGLPSAESATVQPVGKAL CHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCEEEEEECCCCCCCCHHHHHHEE ALLSLDVANTSYDWETAQEKLILDGESERMTLALRYGIARGVELGMDVPVVAYSGGIFDG EEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHH FIEEWHRFFGLPQGSRTETKEDRLLFEYDKKGQERLRMDNSTVRLGDVRVSGGWQLYHEG HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCEEEEEEEEECCCEEEEECC GVNPKAVALRASLKLPTGSSSRLTGSGSTDLALWLSGSSDYSLSWGHATVFGALGGMAMT CCCCEEEEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCEEECCCHHHHHHHCCCEEC DGQVLKDQRENLVGFGSLGAGWSPMENFALKVEFSSHTPFYSDSDMKPLSSPAVVLLFGG CCHHHHHHHHCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC TYAFSPVTALDIALAEDLNVEASPDVALHLGLSHRF CCCCCCHHHEEEEHHHCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MRYVKHFVAISLLLGAVAGPVNADPLVINPFYTFNQSPLVQIYGLPSAESATVQPVGKAL CHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCEEEEEECCCCCCCCHHHHHHEE ALLSLDVANTSYDWETAQEKLILDGESERMTLALRYGIARGVELGMDVPVVAYSGGIFDG EEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHH FIEEWHRFFGLPQGSRTETKEDRLLFEYDKKGQERLRMDNSTVRLGDVRVSGGWQLYHEG HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCEEEEEEEEECCCEEEEECC GVNPKAVALRASLKLPTGSSSRLTGSGSTDLALWLSGSSDYSLSWGHATVFGALGGMAMT CCCCEEEEEEEEEECCCCCCCEEECCCCCEEEEEEECCCCCEEECCCHHHHHHHCCCEEC DGQVLKDQRENLVGFGSLGAGWSPMENFALKVEFSSHTPFYSDSDMKPLSSPAVVLLFGG CCHHHHHHHHCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECC TYAFSPVTALDIALAEDLNVEASPDVALHLGLSHRF CCCCCCHHHEEEEHHHCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA