| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117535
Identifier: 197117535
GI number: 197117535
Start: 1324950
End: 1325333
Strand: Direct
Name: 197117535
Synonym: Gbem_1147
Alternate gene names: NA
Gene position: 1324950-1325333 (Clockwise)
Preceding gene: 197117534
Following gene: 308535219
Centisome position: 28.71
GC content: 61.98
Gene sequence:
>384_bases ATGGCATGCCGCAACGAACAGCCACCAAGCGAACTGGTCAAGGCGGTAGAGGAATTCAATCGCGAGGAGTGGTTCGAGTG CCACGAGACACTGGAAGAGCTCTGGGTGGGGGAGAAGGGGGAGCTGAGGGATTTCTACCAGGGGGTGCTGCAGATAGCCG TCGCGCTGCATCACTGGCATAACGGCAACTTCAAGGGCGCCCTCATCCTGCTGCAAAAAGGCGGCGACTGCCTGCGGCGC GTGTCGGCTGTCTGCCTGCAGGTGGACGTGGCGCGGCTAAGGGGCGATGCCGCAGCGTTCCTCGAAAAGCTTTCCGCAGC GGGCGAGGAGCGCATGGCCGAGGTGGAGCCAAACCTGGCGCCTAAGCTGCATCTGTTTTCTTGA
Upstream 100 bases:
>100_bases AGGGCTTTATATCGACCGCATCTCCTGCGTCGGCTGCGGCAACGCCTCGAAGAGGCAATTCTTCGGGCTGCGCCCGGTCC TGGTCAACTAGCGGCACGCC
Downstream 100 bases:
>100_bases AACAAAAACAGCCGCCTTCCGGTCAACCCGGGGGGCGGCTGTTCTTTTTGCGAGGTTAAACGGCGCCTCTACTTGAGGAT GGTGACCTTGCCGTCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MACRNEQPPSELVKAVEEFNREEWFECHETLEELWVGEKGELRDFYQGVLQIAVALHHWHNGNFKGALILLQKGGDCLRR VSAVCLQVDVARLRGDAAAFLEKLSAAGEERMAEVEPNLAPKLHLFS
Sequences:
>Translated_127_residues MACRNEQPPSELVKAVEEFNREEWFECHETLEELWVGEKGELRDFYQGVLQIAVALHHWHNGNFKGALILLQKGGDCLRR VSAVCLQVDVARLRGDAAAFLEKLSAAGEERMAEVEPNLAPKLHLFS >Mature_126_residues ACRNEQPPSELVKAVEEFNREEWFECHETLEELWVGEKGELRDFYQGVLQIAVALHHWHNGNFKGALILLQKGGDCLRRV SAVCLQVDVARLRGDAAAFLEKLSAAGEERMAEVEPNLAPKLHLFS
Specific function: Unknown
COG id: COG1547
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14357; Mature: 14225
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACRNEQPPSELVKAVEEFNREEWFECHETLEELWVGEKGELRDFYQGVLQIAVALHHWH CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC NGNFKGALILLQKGGDCLRRVSAVCLQVDVARLRGDAAAFLEKLSAAGEERMAEVEPNLA CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC PKLHLFS CCCCCCC >Mature Secondary Structure ACRNEQPPSELVKAVEEFNREEWFECHETLEELWVGEKGELRDFYQGVLQIAVALHHWH CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC NGNFKGALILLQKGGDCLRRVSAVCLQVDVARLRGDAAAFLEKLSAAGEERMAEVEPNLA CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC PKLHLFS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA