Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117534

Identifier: 197117534

GI number: 197117534

Start: 1323789

End: 1324940

Strand: Direct

Name: 197117534

Synonym: Gbem_1146

Alternate gene names: NA

Gene position: 1323789-1324940 (Clockwise)

Preceding gene: 308535218

Following gene: 197117535

Centisome position: 28.68

GC content: 63.98

Gene sequence:

>1152_bases
ATGGATACTTCTTACGTCACCATCATGCTGGTGGTCTTTCTCGTGCTGACCGGTCTCGCCATAGACATCGGCTACATGTA
TGTAAGCGATGAGGATCTGCAGCATTCCGCGGAAATGGCAGCCCTGACCGGAGCCGAATCGCTGAAGCAGCGGCTGCTCT
TCCAGGCGCAGCAGTCCCCGGAAAAGCTGGCGCAGGTCTCCGCGGACCCTCTGCAGTCGGCGGCACGCAGCACCGCCGTG
GACAACGCGACCGGAAAACACAGCGCCTCTGCACTCGTCGCCCTCATGAACGATAACGGCAACGCCCTCTCCGAAAACAA
CGACATAACGGTCGGCTTCTGGAACATGAGCAGCCGCAGTTACACCCCCGGGGGGACCCCGGTGAACGCGATGCAGGTGC
GGGCGCGGCGAACGGCGGAAAGCAGCTCCGTAGGGCTTGGCAGCCTCGGCACCTTCGTCGCCAAGATAAGCGGTACCGCC
TCCTTCGGCTCCACGCCGGTTGCGGTGGCGGCCCTGGTTCCCGGCACCCGCTCCAACATCGCCATCTGCGCCGCCGCCTG
CGAGCCCTCCTGCAGCTATCCCGACGTCTGCAATATCGCTGAACGAAAGATGAGCCACGCGCCATGGGATCCGCGCAGGG
AAAATTCCAGCGCCAACCGCTACCTATACACCTCGCTTTTGCACCCGGTCACCATCACCAACACCATGTCCGACTTGGTC
TGCCAGGAGATGCCGGTGCAGGAAGTCTGCGGCCTCCCCATCTTCACCGCCGCCATGAAGACCGACGCCATCCTGCGCGA
CCTGAAGGCGATGATGTACGACCCGAACGTGGACAGCTCCAACAAGGAGTACGACAACAACGGGAAACTCGCGGGATGGT
GGGTGGTGGTCCCCGCCACCGACTGCGCCGGCTTCCAGGCGGGCGAGACCTTCGAGCAGCACACGGTGGTGAAGTATTCG
CTAGTCCGCATCAGCAGGATCTGCGCCGGCGGGGAACCCGGCTGCGGCAAGACCTCGGCCCGCGCCGACCAGCCGTCAGC
CGCCTGCGTCCCCGGCGGGGAAGGGCTTTATATCGACCGCATCTCCTGCGTCGGCTGCGGCAACGCCTCGAAGAGGCAAT
TCTTCGGGCTGCGCCCGGTCCTGGTCAACTAG

Upstream 100 bases:

>100_bases
AAAGCGGGGCCATGCATTTTGTGCATGGCCCTTTTTTTAACTGATGCTATTATGGCGCACCTGCTGGGTTCACTTTTTTA
ATTAGTCGAGAGGATCTTCA

Downstream 100 bases:

>100_bases
CGGCACGCCATGGCATGCCGCAACGAACAGCCACCAAGCGAACTGGTCAAGGCGGTAGAGGAATTCAATCGCGAGGAGTG
GTTCGAGTGCCACGAGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDTSYVTIMLVVFLVLTGLAIDIGYMYVSDEDLQHSAEMAALTGAESLKQRLLFQAQQSPEKLAQVSADPLQSAARSTAV
DNATGKHSASALVALMNDNGNALSENNDITVGFWNMSSRSYTPGGTPVNAMQVRARRTAESSSVGLGSLGTFVAKISGTA
SFGSTPVAVAALVPGTRSNIAICAAACEPSCSYPDVCNIAERKMSHAPWDPRRENSSANRYLYTSLLHPVTITNTMSDLV
CQEMPVQEVCGLPIFTAAMKTDAILRDLKAMMYDPNVDSSNKEYDNNGKLAGWWVVVPATDCAGFQAGETFEQHTVVKYS
LVRISRICAGGEPGCGKTSARADQPSAACVPGGEGLYIDRISCVGCGNASKRQFFGLRPVLVN

Sequences:

>Translated_383_residues
MDTSYVTIMLVVFLVLTGLAIDIGYMYVSDEDLQHSAEMAALTGAESLKQRLLFQAQQSPEKLAQVSADPLQSAARSTAV
DNATGKHSASALVALMNDNGNALSENNDITVGFWNMSSRSYTPGGTPVNAMQVRARRTAESSSVGLGSLGTFVAKISGTA
SFGSTPVAVAALVPGTRSNIAICAAACEPSCSYPDVCNIAERKMSHAPWDPRRENSSANRYLYTSLLHPVTITNTMSDLV
CQEMPVQEVCGLPIFTAAMKTDAILRDLKAMMYDPNVDSSNKEYDNNGKLAGWWVVVPATDCAGFQAGETFEQHTVVKYS
LVRISRICAGGEPGCGKTSARADQPSAACVPGGEGLYIDRISCVGCGNASKRQFFGLRPVLVN
>Mature_383_residues
MDTSYVTIMLVVFLVLTGLAIDIGYMYVSDEDLQHSAEMAALTGAESLKQRLLFQAQQSPEKLAQVSADPLQSAARSTAV
DNATGKHSASALVALMNDNGNALSENNDITVGFWNMSSRSYTPGGTPVNAMQVRARRTAESSSVGLGSLGTFVAKISGTA
SFGSTPVAVAALVPGTRSNIAICAAACEPSCSYPDVCNIAERKMSHAPWDPRRENSSANRYLYTSLLHPVTITNTMSDLV
CQEMPVQEVCGLPIFTAAMKTDAILRDLKAMMYDPNVDSSNKEYDNNGKLAGWWVVVPATDCAGFQAGETFEQHTVVKYS
LVRISRICAGGEPGCGKTSARADQPSAACVPGGEGLYIDRISCVGCGNASKRQFFGLRPVLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40720; Mature: 40720

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSYVTIMLVVFLVLTGLAIDIGYMYVSDEDLQHSAEMAALTGAESLKQRLLFQAQQSP
CCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCH
EKLAQVSADPLQSAARSTAVDNATGKHSASALVALMNDNGNALSENNDITVGFWNMSSRS
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEEEECCCCC
YTPGGTPVNAMQVRARRTAESSSVGLGSLGTFVAKISGTASFGSTPVAVAALVPGTRSNI
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCE
AICAAACEPSCSYPDVCNIAERKMSHAPWDPRRENSSANRYLYTSLLHPVTITNTMSDLV
EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCEEEHHHHHHHH
CQEMPVQEVCGLPIFTAAMKTDAILRDLKAMMYDPNVDSSNKEYDNNGKLAGWWVVVPAT
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECC
DCAGFQAGETFEQHTVVKYSLVRISRICAGGEPGCGKTSARADQPSAACVPGGEGLYIDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ISCVGCGNASKRQFFGLRPVLVN
EEEEECCCCCCHHHCCCCCEECC
>Mature Secondary Structure
MDTSYVTIMLVVFLVLTGLAIDIGYMYVSDEDLQHSAEMAALTGAESLKQRLLFQAQQSP
CCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCH
EKLAQVSADPLQSAARSTAVDNATGKHSASALVALMNDNGNALSENNDITVGFWNMSSRS
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEEEECCCCC
YTPGGTPVNAMQVRARRTAESSSVGLGSLGTFVAKISGTASFGSTPVAVAALVPGTRSNI
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCE
AICAAACEPSCSYPDVCNIAERKMSHAPWDPRRENSSANRYLYTSLLHPVTITNTMSDLV
EEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCEEEHHHHHHHH
CQEMPVQEVCGLPIFTAAMKTDAILRDLKAMMYDPNVDSSNKEYDNNGKLAGWWVVVPAT
HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECC
DCAGFQAGETFEQHTVVKYSLVRISRICAGGEPGCGKTSARADQPSAACVPGGEGLYIDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
ISCVGCGNASKRQFFGLRPVLVN
EEEEECCCCCCHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA