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The map label for this gene is ybeQ [C]

Identifier: 197117490

GI number: 197117490

Start: 1273435

End: 1274505

Strand: Reverse

Name: ybeQ [C]

Synonym: Gbem_1101

Alternate gene names: 197117490

Gene position: 1274505-1273435 (Counterclockwise)

Preceding gene: 197117491

Following gene: 197117481

Centisome position: 27.62

GC content: 60.97

Gene sequence:

>1071_bases
TTGAAATACCGTAACGCAGCTCCAGCCCTTATCATCCTGGCGGCCCTATCGGCAGTAGGCGCCGCAGCACAGGACAATGC
CTGTTCATCCCTGGAGGGGATGGGGTTGGCAGATCTGCGCAAATCGAAGATAGTCGACGAAGCCCATCCGGCCGGCGCAC
CCCAAAACGACCGTTTCTTCTCAGAGCTGGCCGGGGACGGAAACGCCGCCGTCACCAACAACACCGGTGTCGACCGCGCC
ACAGGCAACAACATAGAGAGAAACGTTGCCGAAGCGTTGAACTGCTTCTCCATTTCGGCACGGCAATCCCAACTGGAGGC
TGCTTACAACCTGGGGGTCATGTACGCATCCGGTCTGGGCGGAAAGCGTGATTACGCACAGGCAGCGGCATGGTTCAAGG
AGGCTGCCGATCAAGGCGACTCCCAATCCCAGTACTTCCTGGGGAACATGTATCGTGAAGGATGCGGCGCACCACGCAGC
ATCGCCGAGGCACTGAAATGGTACCGGCTCGCGGCAGAGAAATGGCACATTGGGGCACAGGAAGGTATCGCCCAGATCTA
CCTCGCCGAAAATAGCCTTCCGGACTCCGGGCAGAAGTGGCACGCTCTTGCCGGCGTGCCCCCTGCCGAGGCGGCCTACC
AAGTGGCGCTGCACTGCGGCAAAGGCCCCGGAAACGCGTGCCGGCCGGCCGATATTGCCGTTTGGCTGCGCATTGCAGCG
AATAGCGGCAACATTGCGGCAGCTCACGACCTAGCGCAACTATACGAGCAACATGCCGCGAAGTTCGCCACAGGCTCCGA
GGCGGTGAAATGGTACCTCGTCGCGGCCACGCACGGCCATGCGAACTCCCAGTTGCATGTAGGCCTTTCGTACAACACTC
AGGGGCCCTCCCGCGACATGGTTCAGGCCTGGGTGTGGCTAGATTTCGCGGCCCGGCAGGGCGTGGAAAAGGCTGCCGAA
GTAAGGGATGCCTTGGTAGGGGAAATGACACGTAGGGAGTTTTACGCCGCACAAAGGCTTAGAAGGGACATGGAGCAGGT
TGCGGGGATCCTTCCCCGCGAGTCGCGCTAG

Upstream 100 bases:

>100_bases
CGACTACACGGCATTCACCATCAGGGAAAACTGCGTCAGATGTCATGACATGTGAGCCGTCGGCGGAGCTTGACCGACGC
CCTTGTAACCGGAGATACCC

Downstream 100 bases:

>100_bases
TAGTGCCCAATTACCTTAGTAACTATAACTACTTTCCTTTGAAATTGCGTGGCTTCAACTGCTCACTTTGGAGCAAAAAG
TGAGTGTTCAAGTTGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Repeat-Containing Protein; Sel1 Domain-Containing Protein; TPR Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; TPR Repeat Protein; TPR Repeat-Containing SEL1 Subfamily Protein; Sel1 Repeat Family; TPR Repeat Protein SEL1 Subfamily; Sodium-Type Flagellar Motor Component; Sel1 Repeat Protein; SEL1 Repeat-Containing Lipoprotein; Tetratricopeptide Repeat Family Protein; TPR Repeat- And Sel1 Domain-Containing Protein; Serine/Threonine Protein Kinase; Sporulation Domain-Containing Protein; LOW QUALITY PROTEIN Sel1 Repeat-Containing Protein; Sel1 Repeat Family Protein; Hemaglutinin Protein; Signal Peptide; AAA ATPase; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; MerG Protein; Sel1-Like Repeat Protein; Peptidase; Localization Factor PodJL; TPR Repeat Protein Protein-Protein Interaction; Tpr Repeat Sel1 Subfamily; Suppressor Of Lin-12-Like Protein; Sel1-Like; Tyrosine -Like Repeat Protein; Hemagglutinin Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKYRNAAPALIILAALSAVGAAAQDNACSSLEGMGLADLRKSKIVDEAHPAGAPQNDRFFSELAGDGNAAVTNNTGVDRA
TGNNIERNVAEALNCFSISARQSQLEAAYNLGVMYASGLGGKRDYAQAAAWFKEAADQGDSQSQYFLGNMYREGCGAPRS
IAEALKWYRLAAEKWHIGAQEGIAQIYLAENSLPDSGQKWHALAGVPPAEAAYQVALHCGKGPGNACRPADIAVWLRIAA
NSGNIAAAHDLAQLYEQHAAKFATGSEAVKWYLVAATHGHANSQLHVGLSYNTQGPSRDMVQAWVWLDFAARQGVEKAAE
VRDALVGEMTRREFYAAQRLRRDMEQVAGILPRESR

Sequences:

>Translated_356_residues
MKYRNAAPALIILAALSAVGAAAQDNACSSLEGMGLADLRKSKIVDEAHPAGAPQNDRFFSELAGDGNAAVTNNTGVDRA
TGNNIERNVAEALNCFSISARQSQLEAAYNLGVMYASGLGGKRDYAQAAAWFKEAADQGDSQSQYFLGNMYREGCGAPRS
IAEALKWYRLAAEKWHIGAQEGIAQIYLAENSLPDSGQKWHALAGVPPAEAAYQVALHCGKGPGNACRPADIAVWLRIAA
NSGNIAAAHDLAQLYEQHAAKFATGSEAVKWYLVAATHGHANSQLHVGLSYNTQGPSRDMVQAWVWLDFAARQGVEKAAE
VRDALVGEMTRREFYAAQRLRRDMEQVAGILPRESR
>Mature_356_residues
MKYRNAAPALIILAALSAVGAAAQDNACSSLEGMGLADLRKSKIVDEAHPAGAPQNDRFFSELAGDGNAAVTNNTGVDRA
TGNNIERNVAEALNCFSISARQSQLEAAYNLGVMYASGLGGKRDYAQAAAWFKEAADQGDSQSQYFLGNMYREGCGAPRS
IAEALKWYRLAAEKWHIGAQEGIAQIYLAENSLPDSGQKWHALAGVPPAEAAYQVALHCGKGPGNACRPADIAVWLRIAA
NSGNIAAAHDLAQLYEQHAAKFATGSEAVKWYLVAATHGHANSQLHVGLSYNTQGPSRDMVQAWVWLDFAARQGVEKAAE
VRDALVGEMTRREFYAAQRLRRDMEQVAGILPRESR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI151301150, Length=318, Percent_Identity=27.6729559748428, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI87081769, Length=243, Percent_Identity=29.6296296296296, Blast_Score=61, Evalue=8e-11,
Organism=Escherichia coli, GI1786867, Length=97, Percent_Identity=37.1134020618557, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38233; Mature: 38233

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRNAAPALIILAALSAVGAAAQDNACSSLEGMGLADLRKSKIVDEAHPAGAPQNDRFF
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
SELAGDGNAAVTNNTGVDRATGNNIERNVAEALNCFSISARQSQLEAAYNLGVMYASGLG
HHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
GKRDYAQAAAWFKEAADQGDSQSQYFLGNMYREGCGAPRSIAEALKWYRLAAEKWHIGAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH
EGIAQIYLAENSLPDSGQKWHALAGVPPAEAAYQVALHCGKGPGNACRPADIAVWLRIAA
HCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEC
NSGNIAAAHDLAQLYEQHAAKFATGSEAVKWYLVAATHGHANSQLHVGLSYNTQGPSRDM
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCHHH
VQAWVWLDFAARQGVEKAAEVRDALVGEMTRREFYAAQRLRRDMEQVAGILPRESR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKYRNAAPALIILAALSAVGAAAQDNACSSLEGMGLADLRKSKIVDEAHPAGAPQNDRFF
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHH
SELAGDGNAAVTNNTGVDRATGNNIERNVAEALNCFSISARQSQLEAAYNLGVMYASGLG
HHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC
GKRDYAQAAAWFKEAADQGDSQSQYFLGNMYREGCGAPRSIAEALKWYRLAAEKWHIGAQ
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH
EGIAQIYLAENSLPDSGQKWHALAGVPPAEAAYQVALHCGKGPGNACRPADIAVWLRIAA
HCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEC
NSGNIAAAHDLAQLYEQHAAKFATGSEAVKWYLVAATHGHANSQLHVGLSYNTQGPSRDM
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCHHH
VQAWVWLDFAARQGVEKAAEVRDALVGEMTRREFYAAQRLRRDMEQVAGILPRESR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA