Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197117481

Identifier: 197117481

GI number: 197117481

Start: 1265713

End: 1266255

Strand: Reverse

Name: 197117481

Synonym: Gbem_1092

Alternate gene names: NA

Gene position: 1266255-1265713 (Counterclockwise)

Preceding gene: 197117490

Following gene: 197117476

Centisome position: 27.44

GC content: 64.09

Gene sequence:

>543_bases
ATGAACAGACATGGATGCACAGTAGTCGCCGCCTTGCTGGTTCTCTCCAGCAGCGGCCCGGCCCGGGGGGCCTTCTATAC
CTATTACCCTTACCAGATGTACGAGGAATACCACCGGCGCTACACCGAGCCCCGCCAGCCGGAGCCGCAGGTAAACGGCC
GCAGGGATGCAGAGGGGGTAAAGCAGCCGCAGCCGGTGAAGCCGGCGGCGAAGCCTGCGCCGGAGTTCCTGTTTCCGGAG
CGGCTGGGGGTCGGGGTCGCGGTGGGGGTGCCGCAGGACTTGTTCTACCTGCCCCAGGGATACTACCTGTGGCGCCAGGG
AGGCTGGTACCACTCCAGCTCCTACGACGGCCCCTGGGGGATGGTCCGGAAGGGGGAGGTTCCCGCGCAGCTAGTGAAAT
ACGACTTGGCCACTATGAGGGAACTCAGAAACCAGGAGTACCGGCGCTACTGGGAGGAGAGGGAAAAGTATCGGGGAAAA
CGGTTCCGGCCGGCCAGGAAGCCGTCGCTATTATCCAAGGAGCCGGGGAAGCGGCCTAACTAG

Upstream 100 bases:

>100_bases
TAATCGACCATAAAAAAGGGGCCGCGGATGCAGCTGGAAGCAGAAAGGAGCGTCAACCTCGGATGTCTCACATCCTGAGA
GGTTTCGTACGGGGGTGCCT

Downstream 100 bases:

>100_bases
GCCACGATATTCCCCCCTCAGGTGAAGCCGGCGCCTACGGTGCAGGCGAAACAATGGTCGGCGGTCGGGATCATCGTCCC
CGGCGCCGGCAGCTCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNRHGCTVVAALLVLSSSGPARGAFYTYYPYQMYEEYHRRYTEPRQPEPQVNGRRDAEGVKQPQPVKPAAKPAPEFLFPE
RLGVGVAVGVPQDLFYLPQGYYLWRQGGWYHSSSYDGPWGMVRKGEVPAQLVKYDLATMRELRNQEYRRYWEEREKYRGK
RFRPARKPSLLSKEPGKRPN

Sequences:

>Translated_180_residues
MNRHGCTVVAALLVLSSSGPARGAFYTYYPYQMYEEYHRRYTEPRQPEPQVNGRRDAEGVKQPQPVKPAAKPAPEFLFPE
RLGVGVAVGVPQDLFYLPQGYYLWRQGGWYHSSSYDGPWGMVRKGEVPAQLVKYDLATMRELRNQEYRRYWEEREKYRGK
RFRPARKPSLLSKEPGKRPN
>Mature_180_residues
MNRHGCTVVAALLVLSSSGPARGAFYTYYPYQMYEEYHRRYTEPRQPEPQVNGRRDAEGVKQPQPVKPAAKPAPEFLFPE
RLGVGVAVGVPQDLFYLPQGYYLWRQGGWYHSSSYDGPWGMVRKGEVPAQLVKYDLATMRELRNQEYRRYWEEREKYRGK
RFRPARKPSLLSKEPGKRPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21032; Mature: 21032

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRHGCTVVAALLVLSSSGPARGAFYTYYPYQMYEEYHRRYTEPRQPEPQVNGRRDAEGV
CCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KQPQPVKPAAKPAPEFLFPERLGVGVAVGVPQDLFYLPQGYYLWRQGGWYHSSSYDGPWG
CCCCCCCCCCCCCCCCCCHHHHCCCEEECCCHHHEECCCCEEEECCCCEECCCCCCCCCC
MVRKGEVPAQLVKYDLATMRELRNQEYRRYWEEREKYRGKRFRPARKPSLLSKEPGKRPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRHGCTVVAALLVLSSSGPARGAFYTYYPYQMYEEYHRRYTEPRQPEPQVNGRRDAEGV
CCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KQPQPVKPAAKPAPEFLFPERLGVGVAVGVPQDLFYLPQGYYLWRQGGWYHSSSYDGPWG
CCCCCCCCCCCCCCCCCCHHHHCCCEEECCCHHHEECCCCEEEECCCCEECCCCCCCCCC
MVRKGEVPAQLVKYDLATMRELRNQEYRRYWEEREKYRGKRFRPARKPSLLSKEPGKRPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA