| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is exeA [H]
Identifier: 197117460
GI number: 197117460
Start: 1243138
End: 1244304
Strand: Direct
Name: exeA [H]
Synonym: Gbem_1071
Alternate gene names: 197117460
Gene position: 1243138-1244304 (Clockwise)
Preceding gene: 197117459
Following gene: 197117461
Centisome position: 26.94
GC content: 53.04
Gene sequence:
>1167_bases ATGTATCTCAACTTCTACAACCTCGATAAAGAACCTTTCCAGATAACTCCGGACCCCGCGTTCCTGTACCTGAGCAGCGT GCATAAGGAGGCGCTTGCTTCCATCATCTACGGAGTCGAAAAAAGAAAGGGGTTCATACTGATTACGGGTGCGGTAGGAG TGGGGAAGACAACCATTCTAAGGGCTTATCTGGAAAAGGCCGAGGCCCAACATCTCAAGACCATCTACTTGTTTAACGCG AACATCTCCTACCTTAACCTGCTGAAGTACATTTTCGCTGAGCTCAACATGACGCCCCAATCCAACGAAGTTTCCGACTT GGTGAACCAACTGCACCAGAGGCTACTCTACTACTACCGTGAAGGGCGCAACATCCTGCTGGTCATAGACGAGGCCCAGA ACATGCCCGTCGACACACTCGAAAACCTCCGCATGTTATCGAACTTCGAGACGGATACGGACAAGCTCATCCAGATCGTG TTCTGCGCGCAATCGGAATTCGAGAAGACTCTGAGTTTGGGGGAACTGAAGCAACTCAAGCAACGCATCGCGGTGAAGGC TACCATCTCCCCTCTCACCAGGGAGGAAGGTATCACCTACATCCATCATCGGTTGAAAACGGCTGGCGACAAGGATTGCA TCATTTTCACCAACGGAGCTTTGAACCAGATCGTGCAGGCCTCGCGCGGAATTCCCCGGGTCATCAACGTACTCTGCGAC AACAGCCTGATTACCGCCTTCGGTTACGGCAAGAAGAGGGTGGGCAGCGGCATCGTGCGGGAGATTACCCGGGATTTCGG GCTGGAGAATCCTCTGTATTTCAGGTGTGGCGTCTTTTTGATGATGCTGCTGCTCATGGCCGCAGCTTTCTTCGGAATGC GTCAAATGACGTCCTTGATGGCTGCGAAAGCTCCTGTTGGCGCGCAAGCGACGACGGCGGCTCCGCAGGCCCGATTGGTG CCTATTTCTGAACGAACTGCCGGGGACAAACGGGCACTCAGGAGGGTGGTCCAACGGGGAGACACTTTGGCGAAGATGAT AAAAGAGGTTTACGGCGAGGTCGACGCTGACAAAATCAGGCGAGTTAAAGAAGCCAACCCGAGCATTGTGGATGAAAACG TAATCGTGGAAGGGGGAATTATCTCATTCCCATACCGCAACCGCTGA
Upstream 100 bases:
>100_bases TGCGGAAAGACTCAGCCAGACATTCACGGATCCCAAAGGTGTGGAAAAGTACCTCGAACTGCCGGTTCTCGTGACAGTCC CGCTAAAAAAGGATTAAGCC
Downstream 100 bases:
>100_bases TCCACAGACTCACGTGACAGGGGAGTGCCATGAGCAATATTCATGAAGCTTTGGAGCAGGCGCGCCGAGAGAAGAGCTGC TCCACAGTATCCTCGCAAAT
Product: type II secretory pathway ATPase ExeA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MYLNFYNLDKEPFQITPDPAFLYLSSVHKEALASIIYGVEKRKGFILITGAVGVGKTTILRAYLEKAEAQHLKTIYLFNA NISYLNLLKYIFAELNMTPQSNEVSDLVNQLHQRLLYYYREGRNILLVIDEAQNMPVDTLENLRMLSNFETDTDKLIQIV FCAQSEFEKTLSLGELKQLKQRIAVKATISPLTREEGITYIHHRLKTAGDKDCIIFTNGALNQIVQASRGIPRVINVLCD NSLITAFGYGKKRVGSGIVREITRDFGLENPLYFRCGVFLMMLLLMAAAFFGMRQMTSLMAAKAPVGAQATTAAPQARLV PISERTAGDKRALRRVVQRGDTLAKMIKEVYGEVDADKIRRVKEANPSIVDENVIVEGGIISFPYRNR
Sequences:
>Translated_388_residues MYLNFYNLDKEPFQITPDPAFLYLSSVHKEALASIIYGVEKRKGFILITGAVGVGKTTILRAYLEKAEAQHLKTIYLFNA NISYLNLLKYIFAELNMTPQSNEVSDLVNQLHQRLLYYYREGRNILLVIDEAQNMPVDTLENLRMLSNFETDTDKLIQIV FCAQSEFEKTLSLGELKQLKQRIAVKATISPLTREEGITYIHHRLKTAGDKDCIIFTNGALNQIVQASRGIPRVINVLCD NSLITAFGYGKKRVGSGIVREITRDFGLENPLYFRCGVFLMMLLLMAAAFFGMRQMTSLMAAKAPVGAQATTAAPQARLV PISERTAGDKRALRRVVQRGDTLAKMIKEVYGEVDADKIRRVKEANPSIVDENVIVEGGIISFPYRNR >Mature_388_residues MYLNFYNLDKEPFQITPDPAFLYLSSVHKEALASIIYGVEKRKGFILITGAVGVGKTTILRAYLEKAEAQHLKTIYLFNA NISYLNLLKYIFAELNMTPQSNEVSDLVNQLHQRLLYYYREGRNILLVIDEAQNMPVDTLENLRMLSNFETDTDKLIQIV FCAQSEFEKTLSLGELKQLKQRIAVKATISPLTREEGITYIHHRLKTAGDKDCIIFTNGALNQIVQASRGIPRVINVLCD NSLITAFGYGKKRVGSGIVREITRDFGLENPLYFRCGVFLMMLLLMAAAFFGMRQMTSLMAAKAPVGAQATTAAPQARLV PISERTAGDKRALRRVVQRGDTLAKMIKEVYGEVDADKIRRVKEANPSIVDENVIVEGGIISFPYRNR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 43701; Mature: 43701
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNFYNLDKEPFQITPDPAFLYLSSVHKEALASIIYGVEKRKGFILITGAVGVGKTTIL CEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH RAYLEKAEAQHLKTIYLFNANISYLNLLKYIFAELNMTPQSNEVSDLVNQLHQRLLYYYR HHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH EGRNILLVIDEAQNMPVDTLENLRMLSNFETDTDKLIQIVFCAQSEFEKTLSLGELKQLK CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRIAVKATISPLTREEGITYIHHRLKTAGDKDCIIFTNGALNQIVQASRGIPRVINVLCD HHHHHHHHHCCHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHC NSLITAFGYGKKRVGSGIVREITRDFGLENPLYFRCGVFLMMLLLMAAAFFGMRQMTSLM CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKAPVGAQATTAAPQARLVPISERTAGDKRALRRVVQRGDTLAKMIKEVYGEVDADKIR HHCCCCCCCCCCCCCCCEEEECHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH RVKEANPSIVDENVIVEGGIISFPYRNR HHHHCCCCEECCCEEEECCEEECCCCCC >Mature Secondary Structure MYLNFYNLDKEPFQITPDPAFLYLSSVHKEALASIIYGVEKRKGFILITGAVGVGKTTIL CEEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH RAYLEKAEAQHLKTIYLFNANISYLNLLKYIFAELNMTPQSNEVSDLVNQLHQRLLYYYR HHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH EGRNILLVIDEAQNMPVDTLENLRMLSNFETDTDKLIQIVFCAQSEFEKTLSLGELKQLK CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRIAVKATISPLTREEGITYIHHRLKTAGDKDCIIFTNGALNQIVQASRGIPRVINVLCD HHHHHHHHHCCHHHHCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHC NSLITAFGYGKKRVGSGIVREITRDFGLENPLYFRCGVFLMMLLLMAAAFFGMRQMTSLM CCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKAPVGAQATTAAPQARLVPISERTAGDKRALRRVVQRGDTLAKMIKEVYGEVDADKIR HHCCCCCCCCCCCCCCCEEEECHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH RVKEANPSIVDENVIVEGGIISFPYRNR HHHHCCCCEECCCEEEECCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]