| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117461
Identifier: 197117461
GI number: 197117461
Start: 1244334
End: 1245056
Strand: Direct
Name: 197117461
Synonym: Gbem_1072
Alternate gene names: NA
Gene position: 1244334-1245056 (Clockwise)
Preceding gene: 197117460
Following gene: 197117462
Centisome position: 26.96
GC content: 52.28
Gene sequence:
>723_bases ATGAGCAATATTCATGAAGCTTTGGAGCAGGCGCGCCGAGAGAAGAGCTGCTCCACAGTATCCTCGCAAATAGCCTTAGA GGCCCAAGTGGTCCGTGGTTTCTCTTTAGCGGATGAAATGTCCAAACTGCACCACCAGATTGGACTCATATTGGCTGACG GCTCCTATAAAGTGCTTCAGTTCGTTGGCTGCAGCCATCGTGCGGGTGTCTCCACTATAGTGCGCGAGTTTGCCTCGGCG GCCGTTAACCACTACGGGAAATCCGTGCTCATCCTTGATCCCTCATGCCAGGAACTGGAGCGGAGGATAAATTTCAACGT CACCTGCGAATTCGGCTGGTTCGATACGGACAAGGACGAACTCCCCGACAAGGCTTTTTTCCGGTTCGGCGACTCCAATC TCTACTTCGCGCCCATATCCGTTCATGCCTCGTTGGTGGCCCCTTCCAAAAACATAGACAGGAACCTGGACCTTTGGGCG AAGCTCAGGGAGAGGTTCGATCTCATCCTAATCGATTCTTCCTCCGGTCCCAAAAGACAGGAGGCAGTGGATTCCTTTCA CAATGTGGACGGGATCATCCTGGTCCTTGAAGCTGGCAAAACGCGCCGTGAAAGCGCCGAAGGTGTGAAGAAAAAGATAC AGGCCGCCGGTGGTGTGATCCTTGGTGCAGTATTCAACAAGAGGCAGTACTACATTCCGGACTTCATCTACAAAAAGCTT TAA
Upstream 100 bases:
>100_bases ACCCGAGCATTGTGGATGAAAACGTAATCGTGGAAGGGGGAATTATCTCATTCCCATACCGCAACCGCTGATCCACAGAC TCACGTGACAGGGGAGTGCC
Downstream 100 bases:
>100_bases CTACTCCGCTGGGCGGCAGGAGCTTCCTGGATGCCCCCATGAGAATTACACAGTAAGAGGTCGCAATGCGAAAGGATAAA AAGACCATCTGGATAGACAT
Product: chromosome partitioning ATPase-like protein
Products: NA
Alternate protein names: ATPases Involved In Chromosome Partitioning-Like Protein; ATPases Involved In Chromosome Partitioning-Like
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSNIHEALEQARREKSCSTVSSQIALEAQVVRGFSLADEMSKLHHQIGLILADGSYKVLQFVGCSHRAGVSTIVREFASA AVNHYGKSVLILDPSCQELERRINFNVTCEFGWFDTDKDELPDKAFFRFGDSNLYFAPISVHASLVAPSKNIDRNLDLWA KLRERFDLILIDSSSGPKRQEAVDSFHNVDGIILVLEAGKTRRESAEGVKKKIQAAGGVILGAVFNKRQYYIPDFIYKKL
Sequences:
>Translated_240_residues MSNIHEALEQARREKSCSTVSSQIALEAQVVRGFSLADEMSKLHHQIGLILADGSYKVLQFVGCSHRAGVSTIVREFASA AVNHYGKSVLILDPSCQELERRINFNVTCEFGWFDTDKDELPDKAFFRFGDSNLYFAPISVHASLVAPSKNIDRNLDLWA KLRERFDLILIDSSSGPKRQEAVDSFHNVDGIILVLEAGKTRRESAEGVKKKIQAAGGVILGAVFNKRQYYIPDFIYKKL >Mature_239_residues SNIHEALEQARREKSCSTVSSQIALEAQVVRGFSLADEMSKLHHQIGLILADGSYKVLQFVGCSHRAGVSTIVREFASAA VNHYGKSVLILDPSCQELERRINFNVTCEFGWFDTDKDELPDKAFFRFGDSNLYFAPISVHASLVAPSKNIDRNLDLWAK LRERFDLILIDSSSGPKRQEAVDSFHNVDGIILVLEAGKTRRESAEGVKKKIQAAGGVILGAVFNKRQYYIPDFIYKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26852; Mature: 26721
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIHEALEQARREKSCSTVSSQIALEAQVVRGFSLADEMSKLHHQIGLILADGSYKVLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEEECCCEEEHH FVGCSHRAGVSTIVREFASAAVNHYGKSVLILDPSCQELERRINFNVTCEFGWFDTDKDE HCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCEEEEEECCCCCCHHH LPDKAFFRFGDSNLYFAPISVHASLVAPSKNIDRNLDLWAKLRERFDLILIDSSSGPKRQ CCCHHHEEECCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHH EAVDSFHNVDGIILVLEAGKTRRESAEGVKKKIQAAGGVILGAVFNKRQYYIPDFIYKKL HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCHHHHHCC >Mature Secondary Structure SNIHEALEQARREKSCSTVSSQIALEAQVVRGFSLADEMSKLHHQIGLILADGSYKVLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEEECCCEEEHH FVGCSHRAGVSTIVREFASAAVNHYGKSVLILDPSCQELERRINFNVTCEFGWFDTDKDE HCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCEEEEEECCCCCCHHH LPDKAFFRFGDSNLYFAPISVHASLVAPSKNIDRNLDLWAKLRERFDLILIDSSSGPKRQ CCCHHHEEECCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHH EAVDSFHNVDGIILVLEAGKTRRESAEGVKKKIQAAGGVILGAVFNKRQYYIPDFIYKKL HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA