| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheB-6 [H]
Identifier: 197117431
GI number: 197117431
Start: 1213540
End: 1214631
Strand: Reverse
Name: cheB-6 [H]
Synonym: Gbem_1041
Alternate gene names: 197117431
Gene position: 1214631-1213540 (Counterclockwise)
Preceding gene: 197117432
Following gene: 197117430
Centisome position: 26.32
GC content: 66.85
Gene sequence:
>1092_bases ATGGCAATAAAGGTTCTCATAGTAGACGATTCCGCACTGATACGCTCGCTGCTCACCGAGATCATCAACGCCGAGCCGGA CCTGCAGGTGGTCGGCACGGCGCCCGACCCGCTGGCGGCGCGGCAGCGGATCAAGGAGCTGAACCCGGACGTACTGACCC TGGACGTGGAGATGCCGAAGATGGACGGGCTCGTCTTCCTGGAAAAGCTGATGCGGCTGCGCCCCATGCCGGTGGTCATG GTCTCCTCGCTCACCGAAAAGAGCTCGGCGGTGACGCTCAAGGCGCTGGAGATGGGAGCCTTCGATTTCGTGACCAAGCC GAAGATCGACATCCGCAGCGGGATCATGGAGTACGCCGGCGAGCTGACCGAGAAGATCCGCTGCGCCTATCTCTCCGGGC GCAGGAGGAAAGGGGCGCGGGGAGGAGAGCTCCAACCCGTCACCGGGAAGCTTTCCGCCGACGCGATCCTCCCCAACCGG CGGGACCACTTCTCCTCCACGGAGAAGGTGATCGCGGTCGGAGCCTCCACCGGCGGGACCGAGGCGCTGAAGACCTTCCT CGCCGCGCTCCCCCCAGACTGCCCGGGGATACTGGTGACCCAGCACATGCCGGAGACCTTCACCAAGACCTTTGCGGCGC GCCTGAACGGGCTTTGCCAACTGGCGGTGAAGGAGGCGGAGCACGGGGAGCGTGTGCTGCCGGGGCATGCCTACGTGGCA CCCGGCAACCGCCACCTGATGCTGGCCAGAAGCGGCGCCAACTACACCGTGGCGCTGGGGGACGGCCCTGCGGTCTCCCG GCACCGCCCCTCGGTGGACGTGCTCTTTCGCTCCGCGGCCAACTGCGCCGGCGCCAACAGCCTGGGAATAATCATGACCG GCATGGGGGACGACGGCGCCGCCGGGATGCTGGAGATGCACGCGGCGGGGGCGAGAACCATCGCCCAGGACGAAGAGAGC TGCGTCGTCTTCGGTATGCCGAAGGAGGCGATCGCCCGCGGCGGCGTCGACGAAGTGGTGCCGCTTGAGGAGATCGCGGG GCGGCTCATCGCCTGGCTTGCCTCGCACGGCAGGAGAAGTTTCAGGGTGTAG
Upstream 100 bases:
>100_bases GGACCTGGGGGATTGCTGCCCCCGCAAACTGGTGTTTTTCCCCCGGACCGGAAAGGCCTGGGTGAAAAGGATGCGGGATC TTCCCGCTGCAAGAGGATAG
Downstream 100 bases:
>100_bases CTGCCGGCAAGAAAAAGGCGCCCTCACCCCGCCCCTCTCCCAGAGGGAGAGGGGGAATGGACAGAGGCATCGGTATGAAG CGGCATGGCCGGTTGAGCTG
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MAIKVLIVDDSALIRSLLTEIINAEPDLQVVGTAPDPLAARQRIKELNPDVLTLDVEMPKMDGLVFLEKLMRLRPMPVVM VSSLTEKSSAVTLKALEMGAFDFVTKPKIDIRSGIMEYAGELTEKIRCAYLSGRRRKGARGGELQPVTGKLSADAILPNR RDHFSSTEKVIAVGASTGGTEALKTFLAALPPDCPGILVTQHMPETFTKTFAARLNGLCQLAVKEAEHGERVLPGHAYVA PGNRHLMLARSGANYTVALGDGPAVSRHRPSVDVLFRSAANCAGANSLGIIMTGMGDDGAAGMLEMHAAGARTIAQDEES CVVFGMPKEAIARGGVDEVVPLEEIAGRLIAWLASHGRRSFRV
Sequences:
>Translated_363_residues MAIKVLIVDDSALIRSLLTEIINAEPDLQVVGTAPDPLAARQRIKELNPDVLTLDVEMPKMDGLVFLEKLMRLRPMPVVM VSSLTEKSSAVTLKALEMGAFDFVTKPKIDIRSGIMEYAGELTEKIRCAYLSGRRRKGARGGELQPVTGKLSADAILPNR RDHFSSTEKVIAVGASTGGTEALKTFLAALPPDCPGILVTQHMPETFTKTFAARLNGLCQLAVKEAEHGERVLPGHAYVA PGNRHLMLARSGANYTVALGDGPAVSRHRPSVDVLFRSAANCAGANSLGIIMTGMGDDGAAGMLEMHAAGARTIAQDEES CVVFGMPKEAIARGGVDEVVPLEEIAGRLIAWLASHGRRSFRV >Mature_362_residues AIKVLIVDDSALIRSLLTEIINAEPDLQVVGTAPDPLAARQRIKELNPDVLTLDVEMPKMDGLVFLEKLMRLRPMPVVMV SSLTEKSSAVTLKALEMGAFDFVTKPKIDIRSGIMEYAGELTEKIRCAYLSGRRRKGARGGELQPVTGKLSADAILPNRR DHFSSTEKVIAVGASTGGTEALKTFLAALPPDCPGILVTQHMPETFTKTFAARLNGLCQLAVKEAEHGERVLPGHAYVAP GNRHLMLARSGANYTVALGDGPAVSRHRPSVDVLFRSAANCAGANSLGIIMTGMGDDGAAGMLEMHAAGARTIAQDEESC VVFGMPKEAIARGGVDEVVPLEEIAGRLIAWLASHGRRSFRV
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=353, Percent_Identity=60.6232294617564, Blast_Score=422, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 38814; Mature: 38682
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLIVDDSALIRSLLTEIINAEPDLQVVGTAPDPLAARQRIKELNPDVLTLDVEMPK CEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC MDGLVFLEKLMRLRPMPVVMVSSLTEKSSAVTLKALEMGAFDFVTKPKIDIRSGIMEYAG CCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELTEKIRCAYLSGRRRKGARGGELQPVTGKLSADAILPNRRDHFSSTEKVIAVGASTGGT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH EALKTFLAALPPDCPGILVTQHMPETFTKTFAARLNGLCQLAVKEAEHGERVLPGHAYVA HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEC PGNRHLMLARSGANYTVALGDGPAVSRHRPSVDVLFRSAANCAGANSLGIIMTGMGDDGA CCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCC AGMLEMHAAGARTIAQDEESCVVFGMPKEAIARGGVDEVVPLEEIAGRLIAWLASHGRRS CCHHHHHHCCCHHHCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC FRV CCC >Mature Secondary Structure AIKVLIVDDSALIRSLLTEIINAEPDLQVVGTAPDPLAARQRIKELNPDVLTLDVEMPK EEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCC MDGLVFLEKLMRLRPMPVVMVSSLTEKSSAVTLKALEMGAFDFVTKPKIDIRSGIMEYAG CCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELTEKIRCAYLSGRRRKGARGGELQPVTGKLSADAILPNRRDHFSSTEKVIAVGASTGGT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCH EALKTFLAALPPDCPGILVTQHMPETFTKTFAARLNGLCQLAVKEAEHGERVLPGHAYVA HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEC PGNRHLMLARSGANYTVALGDGPAVSRHRPSVDVLFRSAANCAGANSLGIIMTGMGDDGA CCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCC AGMLEMHAAGARTIAQDEESCVVFGMPKEAIARGGVDEVVPLEEIAGRLIAWLASHGRRS CCHHHHHHCCCHHHCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC FRV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA