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The map label for this gene is yybF [H]

Identifier: 197117425

GI number: 197117425

Start: 1205950

End: 1207182

Strand: Reverse

Name: yybF [H]

Synonym: Gbem_1035

Alternate gene names: 197117425

Gene position: 1207182-1205950 (Counterclockwise)

Preceding gene: 197117427

Following gene: 197117424

Centisome position: 26.16

GC content: 62.53

Gene sequence:

>1233_bases
ATGGGATCGATAAAAAGCGGAACCAAGAGATACCGGCAGATCAACCTCGCTTTCTTCATGGCCGGCTTCGTCACCTTCAT
CACGCTCTACGACGTGCAGCCGCTGCTGCCCGAGTTCTCCCGGGAATTCGGGGTCGCCGCCGCCTGGGGGAGCCTGCCGC
TCTCGATAACCACCTGCGCCCTCGCCGTCGCCATGCTCTTCGCCGGTACCATCTCGGAAACCATGGGTAGAAAGAAGGTG
ATGGTGGCCTCGCTGGTCGCCACCTCCCTCCTGGCGTTCGTCACCTCGCAGACCTCCACCCTCCCCGAACTGGTCGCGGT
GAGGCTGGTCCAGGGGGTGGTGCTCGCGGGGCTTCCGGCGGTGGCGATGGCATACCTGAGCGAAGAGATCGCCCCTGCGT
CCCTTACCTCCGCCATCGGCCTCTACATAAGCGGCAACGCCATCGGCGGCATGACCGGAAGGATCTTCACCGCCACCATG
ACCGAGTTGGTCTCCTGGCGCTCCGCCCTGGCCGTGATCGGGGTAGCGTGCTTGCTGCTGAGCCTGTACTTTGCCAAGTC
GCTCCCCCCTTCGGAGAATTTCAAGCAAAGGCCCTTCGCCGCGCGCTACTTCTTCACCTCGCTCTTCAAGCAGTTGCAGG
ACCCGGGGCTTCTCTGCCTCTACGGCATTTCCTTCCTCATCATGGGGAGCTTCGTTACGCTCTACAACTACATCACCTTC
AGGCTCCTGGGCTCACCCTATTACCTGAGCCAGTCGCTGGTGAGCCTCATCTTCCTGGTCTACATGCTCGGCTCCTTCAG
TTCGTCCATGGTGGGGGGGCAGGTGGAGCGCTTCGGAAGGAGCCGCATGCTCTTTCTCACCATCGCCACCATGGTTGCCG
GGGCGCTGATCACGCTGGCCCATGACGTCCCCACCGTCGTTGCCGGAATCGGCGTTTTCACCTGCGGCTTCTTCGGCGCC
CACACCATCGCTTCGGCATGGGTCGGGAGCAGGGCGAAAAGCGCCCGGGCACAGGCGGCGTCTCTCTACCTCTTCTTCTA
TTACCTGGGATCGAGCGTCTCCGGCACCGTAGGCGGGCTCTTCTGGGCCCGGCACGGCTGGGTCGGGGTGGTGCTGTTGA
TCATGGGGCTTCTCTGCCTGGGGCTGTTCCTTTTGAAGGCGCTAACGCTTTGTGCTGAGGGAACCTGCAACGCAAAAAAC
GCCGTAGCAAGGTTGGACGCGCTGCGCAGCTGA

Upstream 100 bases:

>100_bases
TGAAGCGCGGAAGCGCCGAGAGCAAGTCCCCCGGAGAGCTAGAACAGCTTGATTTGAAAGATGGTGAGCGAACACTGCGC
AGGAAGGGTGGTACAGGACC

Downstream 100 bases:

>100_bases
GCCCTCAAGTTCCGGACATGGCCGCCGATATGTCCCCTATCAGCAGGGACAAGGAGCAAGCCATGTCGGACTTAATACGT
GTAGCAAACGGGGTAGCCAT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGSIKSGTKRYRQINLAFFMAGFVTFITLYDVQPLLPEFSREFGVAAAWGSLPLSITTCALAVAMLFAGTISETMGRKKV
MVASLVATSLLAFVTSQTSTLPELVAVRLVQGVVLAGLPAVAMAYLSEEIAPASLTSAIGLYISGNAIGGMTGRIFTATM
TELVSWRSALAVIGVACLLLSLYFAKSLPPSENFKQRPFAARYFFTSLFKQLQDPGLLCLYGISFLIMGSFVTLYNYITF
RLLGSPYYLSQSLVSLIFLVYMLGSFSSSMVGGQVERFGRSRMLFLTIATMVAGALITLAHDVPTVVAGIGVFTCGFFGA
HTIASAWVGSRAKSARAQAASLYLFFYYLGSSVSGTVGGLFWARHGWVGVVLLIMGLLCLGLFLLKALTLCAEGTCNAKN
AVARLDALRS

Sequences:

>Translated_410_residues
MGSIKSGTKRYRQINLAFFMAGFVTFITLYDVQPLLPEFSREFGVAAAWGSLPLSITTCALAVAMLFAGTISETMGRKKV
MVASLVATSLLAFVTSQTSTLPELVAVRLVQGVVLAGLPAVAMAYLSEEIAPASLTSAIGLYISGNAIGGMTGRIFTATM
TELVSWRSALAVIGVACLLLSLYFAKSLPPSENFKQRPFAARYFFTSLFKQLQDPGLLCLYGISFLIMGSFVTLYNYITF
RLLGSPYYLSQSLVSLIFLVYMLGSFSSSMVGGQVERFGRSRMLFLTIATMVAGALITLAHDVPTVVAGIGVFTCGFFGA
HTIASAWVGSRAKSARAQAASLYLFFYYLGSSVSGTVGGLFWARHGWVGVVLLIMGLLCLGLFLLKALTLCAEGTCNAKN
AVARLDALRS
>Mature_409_residues
GSIKSGTKRYRQINLAFFMAGFVTFITLYDVQPLLPEFSREFGVAAAWGSLPLSITTCALAVAMLFAGTISETMGRKKVM
VASLVATSLLAFVTSQTSTLPELVAVRLVQGVVLAGLPAVAMAYLSEEIAPASLTSAIGLYISGNAIGGMTGRIFTATMT
ELVSWRSALAVIGVACLLLSLYFAKSLPPSENFKQRPFAARYFFTSLFKQLQDPGLLCLYGISFLIMGSFVTLYNYITFR
LLGSPYYLSQSLVSLIFLVYMLGSFSSSMVGGQVERFGRSRMLFLTIATMVAGALITLAHDVPTVVAGIGVFTCGFFGAH
TIASAWVGSRAKSARAQAASLYLFFYYLGSSVSGTVGGLFWARHGWVGVVLLIMGLLCLGLFLLKALTLCAEGTCNAKNA
VARLDALRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=379, Percent_Identity=43.7994722955145, Blast_Score=317, Evalue=9e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43841; Mature: 43710

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIKSGTKRYRQINLAFFMAGFVTFITLYDVQPLLPEFSREFGVAAAWGSLPLSITTCA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LAVAMLFAGTISETMGRKKVMVASLVATSLLAFVTSQTSTLPELVAVRLVQGVVLAGLPA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
VAMAYLSEEIAPASLTSAIGLYISGNAIGGMTGRIFTATMTELVSWRSALAVIGVACLLL
HHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLYFAKSLPPSENFKQRPFAARYFFTSLFKQLQDPGLLCLYGISFLIMGSFVTLYNYITF
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
RLLGSPYYLSQSLVSLIFLVYMLGSFSSSMVGGQVERFGRSRMLFLTIATMVAGALITLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HDVPTVVAGIGVFTCGFFGAHTIASAWVGSRAKSARAQAASLYLFFYYLGSSVSGTVGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FWARHGWVGVVLLIMGLLCLGLFLLKALTLCAEGTCNAKNAVARLDALRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GSIKSGTKRYRQINLAFFMAGFVTFITLYDVQPLLPEFSREFGVAAAWGSLPLSITTCA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LAVAMLFAGTISETMGRKKVMVASLVATSLLAFVTSQTSTLPELVAVRLVQGVVLAGLPA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
VAMAYLSEEIAPASLTSAIGLYISGNAIGGMTGRIFTATMTELVSWRSALAVIGVACLLL
HHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLYFAKSLPPSENFKQRPFAARYFFTSLFKQLQDPGLLCLYGISFLIMGSFVTLYNYITF
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHH
RLLGSPYYLSQSLVSLIFLVYMLGSFSSSMVGGQVERFGRSRMLFLTIATMVAGALITLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
HDVPTVVAGIGVFTCGFFGAHTIASAWVGSRAKSARAQAASLYLFFYYLGSSVSGTVGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
FWARHGWVGVVLLIMGLLCLGLFLLKALTLCAEGTCNAKNAVARLDALRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]