| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheB-4 [H]
Identifier: 197117427
GI number: 197117427
Start: 1208298
End: 1208867
Strand: Reverse
Name: cheB-4 [H]
Synonym: Gbem_1037
Alternate gene names: 197117427
Gene position: 1208867-1208298 (Counterclockwise)
Preceding gene: 197117428
Following gene: 197117425
Centisome position: 26.19
GC content: 65.61
Gene sequence:
>570_bases ATGAGCGCTAGAAACCTGGTGGTCATCGGAGTTTCCACCGGTGGGCCGCTGACCCTCAAGGCCTTGTTCCGGGAGCTGCC GGCGCTCGATGCGGCCTTCGTCGTGGTGCTCCACATCACGCCGCAGATGGACTACCGCATAGCCCAGGGGCTAGACGCGG TCGCCTCCATGCCGGTAACGCTCGCCGAGGACCAGGAGTTCCTGAGAAGCGGCAGGATCTACCTGGCCCCCGGCGGGTTT CACCTGAGGCTGAACGGCAACCAGCGGGTCGTGCTCTGCGAGGGGCCGCGCGTCAACTACGTCCAGCCGGCCGCCGACGT CGCCATGCTCTCGCTCACCCGGCAGCTCAAAGGGAAGCTGGTCGGCATCGTCCTGACCGGCATGGGAAAGGACGGCGCCG AGGGGATCCGGCACATCAAGCGGCTAGGAGGGGTCACCATGGCGCAGGACCAGCAATCCTCCACCATCTACGGCATGCCG AAAGCGGCCGCCGACACAGGCGCCGTCGACTTCGTGCTCCCCCCGCAAAAGATCGCCGCCAAATTAAAGGAGATCCTGGA CCCGCTTTAG
Upstream 100 bases:
>100_bases CAGGAATACGTCTCGGACTACATGACCAAGCCCTTCGGCCCGGACCAGCTGATCGAATCGCTTGAGTACTACCTTACCCT TTTGAACACCCCGGTGGACT
Downstream 100 bases:
>100_bases CCGCTCAGCCGGTTTCCGCCTGGCTGCGCCACTCCTCCGCCGCATGCTGCAGCAGGAAGTCGACGAAGGCGCGGTTGGCA AGGGAGAGATAGGTATCCTT
Product: chemotaxis protein-glutamate methylesterase CheB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSARNLVVIGVSTGGPLTLKALFRELPALDAAFVVVLHITPQMDYRIAQGLDAVASMPVTLAEDQEFLRSGRIYLAPGGF HLRLNGNQRVVLCEGPRVNYVQPAADVAMLSLTRQLKGKLVGIVLTGMGKDGAEGIRHIKRLGGVTMAQDQQSSTIYGMP KAAADTGAVDFVLPPQKIAAKLKEILDPL
Sequences:
>Translated_189_residues MSARNLVVIGVSTGGPLTLKALFRELPALDAAFVVVLHITPQMDYRIAQGLDAVASMPVTLAEDQEFLRSGRIYLAPGGF HLRLNGNQRVVLCEGPRVNYVQPAADVAMLSLTRQLKGKLVGIVLTGMGKDGAEGIRHIKRLGGVTMAQDQQSSTIYGMP KAAADTGAVDFVLPPQKIAAKLKEILDPL >Mature_188_residues SARNLVVIGVSTGGPLTLKALFRELPALDAAFVVVLHITPQMDYRIAQGLDAVASMPVTLAEDQEFLRSGRIYLAPGGFH LRLNGNQRVVLCEGPRVNYVQPAADVAMLSLTRQLKGKLVGIVLTGMGKDGAEGIRHIKRLGGVTMAQDQQSSTIYGMPK AAADTGAVDFVLPPQKIAAKLKEILDPL
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=185, Percent_Identity=32.4324324324324, Blast_Score=112, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 20171; Mature: 20040
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00120 LIPASE_SER ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARNLVVIGVSTGGPLTLKALFRELPALDAAFVVVLHITPQMDYRIAQGLDAVASMPVT CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCHHHHHHCCEE LAEDQEFLRSGRIYLAPGGFHLRLNGNQRVVLCEGPRVNYVQPAADVAMLSLTRQLKGKL ECCCHHHHHCCCEEEECCCEEEEECCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCEE VGIVLTGMGKDGAEGIRHIKRLGGVTMAQDQQSSTIYGMPKAAADTGAVDFVLPPQKIAA EEEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCCEEEEECCHHHHH KLKEILDPL HHHHHHCCC >Mature Secondary Structure SARNLVVIGVSTGGPLTLKALFRELPALDAAFVVVLHITPQMDYRIAQGLDAVASMPVT CCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCHHHHHHCCEE LAEDQEFLRSGRIYLAPGGFHLRLNGNQRVVLCEGPRVNYVQPAADVAMLSLTRQLKGKL ECCCHHHHHCCCEEEECCCEEEEECCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCEE VGIVLTGMGKDGAEGIRHIKRLGGVTMAQDQQSSTIYGMPKAAADTGAVDFVLPPQKIAA EEEEEEECCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCCCCCEEEEECCHHHHH KLKEILDPL HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA