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The map label for this gene is ybeX [C]

Identifier: 197117390

GI number: 197117390

Start: 1157507

End: 1158370

Strand: Direct

Name: ybeX [C]

Synonym: Gbem_1000

Alternate gene names: 197117390

Gene position: 1157507-1158370 (Clockwise)

Preceding gene: 197117389

Following gene: 308535207

Centisome position: 25.08

GC content: 62.62

Gene sequence:

>864_bases
TTGGAAGAGGATAACGGAAGCAAGGGGCAGGGCTTGATCGAGTCCCTCACCAGGCTCTTGTACGGCAAGAAGCGGGTCAC
CGAGGCCGAGATCCAGGAGATGATGGACGCCGGCGAGGAAGAAGGGGTCATCAACCAGGAGGAGAACGCGATGATCCGTT
CCATCCTGGGCCTGGGTGACTCCATGGTGCGCGAGATCATGCTGCCGCGCATGGAGATGTCCTGCGTCTCCATCGAGGAC
GAGGTGAGCGAGGTGCTGAAATCCATCATCGCCTCCGGCCATTCCCGCCTCCCTGTCTACGAAGGAACCATCGACAACGT
GATCGGCCTCATCTACGCCAAGGACCTGCTGAGGTACTGGGGGGAGCCGGACCACGCGATTGAGCTTAGAAAGCTGATCC
GCCCGCCGTTTTTCATCCCCGAGACCAAGAACCTGGAGGAGTTGCTGCACGACTTCAAGAAGCGGCGGGTGCACATGGCT
GTCGTCATCGACGAGTACGGCGGCACGGCCGGGCTCGTCACCATCGAGGACCTCTTGGAGCAGATCGTGGGGGACATCCA
GGACGAGTACGACCTGGAGACCGAGCGGCTGTCGGTGCAAGCGGACAACTCCATCGTGGCCGACGGCAGGCTCCCCATCG
AGGAGCTGCAGGAGCATTTCGACGTGGTGGTGGAGAAGGACAAGTTCGAGACGGTGGGGGGGCTCATTTTCCATCTCACC
GGGCGCATCCCCGCCGCCGGAGAGGTGATCGAGAGCGACGACCTGGTCTTGACCGTGCTGGAGGCTGACGACAGGCGCAT
CGCCAAGGTGCATATCGCCAGGCGCGAGGCGCGGCCGCAGGACAAGGAGTCCGAGGCGCCGTGA

Upstream 100 bases:

>100_bases
CACCGGCATCTCGATCACCGTGGCGGTGAACCTGCTATTCAACGCCTTCGCCTGAGAGGGAAGATCAAACGGTTAACGCA
ACAACGGAGGAGAAACGTCC

Downstream 100 bases:

>100_bases
GAAAAAGCAAGATGAACCTTGGGAGGTCTGCTGCGGGGCGCTACCTGCTGGCGCTTCTTTCCGGGGGGATGCTGGCGCTG
GCATTCCCGGAGCCGGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MEEDNGSKGQGLIESLTRLLYGKKRVTEAEIQEMMDAGEEEGVINQEENAMIRSILGLGDSMVREIMLPRMEMSCVSIED
EVSEVLKSIIASGHSRLPVYEGTIDNVIGLIYAKDLLRYWGEPDHAIELRKLIRPPFFIPETKNLEELLHDFKKRRVHMA
VVIDEYGGTAGLVTIEDLLEQIVGDIQDEYDLETERLSVQADNSIVADGRLPIEELQEHFDVVVEKDKFETVGGLIFHLT
GRIPAAGEVIESDDLVLTVLEADDRRIAKVHIARREARPQDKESEAP

Sequences:

>Translated_287_residues
MEEDNGSKGQGLIESLTRLLYGKKRVTEAEIQEMMDAGEEEGVINQEENAMIRSILGLGDSMVREIMLPRMEMSCVSIED
EVSEVLKSIIASGHSRLPVYEGTIDNVIGLIYAKDLLRYWGEPDHAIELRKLIRPPFFIPETKNLEELLHDFKKRRVHMA
VVIDEYGGTAGLVTIEDLLEQIVGDIQDEYDLETERLSVQADNSIVADGRLPIEELQEHFDVVVEKDKFETVGGLIFHLT
GRIPAAGEVIESDDLVLTVLEADDRRIAKVHIARREARPQDKESEAP
>Mature_287_residues
MEEDNGSKGQGLIESLTRLLYGKKRVTEAEIQEMMDAGEEEGVINQEENAMIRSILGLGDSMVREIMLPRMEMSCVSIED
EVSEVLKSIIASGHSRLPVYEGTIDNVIGLIYAKDLLRYWGEPDHAIELRKLIRPPFFIPETKNLEELLHDFKKRRVHMA
VVIDEYGGTAGLVTIEDLLEQIVGDIQDEYDLETERLSVQADNSIVADGRLPIEELQEHFDVVVEKDKFETVGGLIFHLT
GRIPAAGEVIESDDLVLTVLEADDRRIAKVHIARREARPQDKESEAP

Specific function: Unknown

COG id: COG4535

COG function: function code P; Putative Mg2+ and Co2+ transporter CorC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=216, Percent_Identity=31.0185185185185, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI94681046, Length=197, Percent_Identity=28.9340101522843, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI40068053, Length=182, Percent_Identity=29.1208791208791, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI40068055, Length=182, Percent_Identity=29.1208791208791, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1786879, Length=271, Percent_Identity=35.4243542435424, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI87082033, Length=276, Percent_Identity=32.2463768115942, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788119, Length=275, Percent_Identity=32, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI145693175, Length=238, Percent_Identity=28.1512605042017, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1790664, Length=268, Percent_Identity=25, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 32333; Mature: 32333

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEDNGSKGQGLIESLTRLLYGKKRVTEAEIQEMMDAGEEEGVINQEENAMIRSILGLGD
CCCCCCCCCCHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
SMVREIMLPRMEMSCVSIEDEVSEVLKSIIASGHSRLPVYEGTIDNVIGLIYAKDLLRYW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHC
GEPDHAIELRKLIRPPFFIPETKNLEELLHDFKKRRVHMAVVIDEYGGTAGLVTIEDLLE
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCEEEHHHHHH
QIVGDIQDEYDLETERLSVQADNSIVADGRLPIEELQEHFDVVVEKDKFETVGGLIFHLT
HHHHHHHHHCCCCHHHEEEECCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
GRIPAAGEVIESDDLVLTVLEADDRRIAKVHIARREARPQDKESEAP
CCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEEDNGSKGQGLIESLTRLLYGKKRVTEAEIQEMMDAGEEEGVINQEENAMIRSILGLGD
CCCCCCCCCCHHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
SMVREIMLPRMEMSCVSIEDEVSEVLKSIIASGHSRLPVYEGTIDNVIGLIYAKDLLRYW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHC
GEPDHAIELRKLIRPPFFIPETKNLEELLHDFKKRRVHMAVVIDEYGGTAGLVTIEDLLE
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCCEEEHHHHHH
QIVGDIQDEYDLETERLSVQADNSIVADGRLPIEELQEHFDVVVEKDKFETVGGLIFHLT
HHHHHHHHHCCCCHHHEEEECCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
GRIPAAGEVIESDDLVLTVLEADDRRIAKVHIARREARPQDKESEAP
CCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]