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The map label for this gene is degP [C]

Identifier: 197117297

GI number: 197117297

Start: 1068020

End: 1069300

Strand: Reverse

Name: degP [C]

Synonym: Gbem_0907

Alternate gene names: 197117297

Gene position: 1069300-1068020 (Counterclockwise)

Preceding gene: 197117307

Following gene: 197117296

Centisome position: 23.17

GC content: 61.67

Gene sequence:

>1281_bases
ATGCTTTCCCCTTCCCACTTACGGCATCTCGTTGCCGCCTTCTCCCTCTTTGCCATGACCGGTTGCTGCACGACTTCAGG
AAAACAGGTCATCGGCAACCCCGAGGTGCCCTATCCGCTTCCGTCTGCGCCCAAGGTGGGGGACATAATCCACCTCCCCA
CCGGGGTCCTGGTGACCCCGGAACAGATGAAGAAAGTCGCCACCGACGCACGGGTGGTCTACGTGGGGGAGACCCATGAC
AACCCCGCCTCGCACCGCCTGGAACTGGACATGCTGAAGGCCCTGGAAGAGCGCTACCCGGGAAAGGCCGCGCTCGGCAT
GGAGATGTTCACCAGGTCCCAGCAGCCCGTCCTGGACCGCTGGAGCGCAGGCGAGCTGGACGAAAAAACCTTCGTGAAGG
ATTCACACTGGTTCGATACCTGGAAGATGGATTTCGACTATTACCGCGACCTGCTGCTCTACGCCAAGGAAAAGCGCATC
CCCATTATCGGGTTGAACGCTGAGAAAAGCCTGGTGCAGGCGGTGCAGAGCAAGCCCCTGGAGGACCTAAGCGCCGAGGA
AAAGGCGCAGCTCCCCGAGCTCGACCTCTCCGACCCCTATCAACGGGCGCAGACCGAGAGCATCTTCGCCGGGCACAGCC
ACGGCAAGATGGCGGCCGAGGGTTTTCTGCGCGCTCAGACGCTTTGGGACGACACCATGGCCGAGACGGCGGCACGTTTC
CTGGAGAGTCCGCAGGGGCAGGACCGTCACCTCCTGGTGGCGGCCGGCGGCAACCACGTAAGCTACGGGTTCGGGATTCC
CCGCCGCGTCTTCCGCCGCGTGCCGAGTTCCTATGTAACCATTGGAGGGCACGAGGTGGTCGTCACCAGGCAAGTGCAGC
CGGAAACCATGGATGTTGAGCTCCCGGGGTTTCCCATGGTGGCCTTCGACTTCCTGGTCAACTTCGCCTATGAGGAACTA
CCGAAGAGAGACGTGATGCTGGGGGTTGCCTTCGATAACGACCCGAACAAGCGCGGGCTGCTGGTTAAAACCGTGATCCC
CGAATCGAATGCGGCGCGCGCCGGAGTCAAGGAATGGGACCTGCTGCTAAGCCTGGACGGAGAGCCTCTTACTGAGGCCT
TCGACCTGATCTACGCGGTAAAGCAGAAACACGTGGGCGACCGGGGCACGCTGAAGCTTGAGCGAAACGGGGCACCGCTA
AGCGTCGAGGTCGAATTCAAACAGAGCGAGCCTTACCAGCACGGCAAGCAGGAAAATGCGGCCCCCCAAAAGGCGCCATG
A

Upstream 100 bases:

>100_bases
CAGGACGGCCGTTTCCGGACAACTCTCCGGTCCGCCGACAGGGGGTTTCCTTGCCCGACTACCAAAGGCCCGTTGGGCCG
GCATGCTATCAGGAGGCACC

Downstream 100 bases:

>100_bases
CACCGAAATCTTTTGGAGGATAGGATATGTATGCCATGAGTAATGTCGGAAACACGATTGCAATGGTGCTGGCAGGCGGC
AAAGGGGAAAGGCTCAGCCC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLSPSHLRHLVAAFSLFAMTGCCTTSGKQVIGNPEVPYPLPSAPKVGDIIHLPTGVLVTPEQMKKVATDARVVYVGETHD
NPASHRLELDMLKALEERYPGKAALGMEMFTRSQQPVLDRWSAGELDEKTFVKDSHWFDTWKMDFDYYRDLLLYAKEKRI
PIIGLNAEKSLVQAVQSKPLEDLSAEEKAQLPELDLSDPYQRAQTESIFAGHSHGKMAAEGFLRAQTLWDDTMAETAARF
LESPQGQDRHLLVAAGGNHVSYGFGIPRRVFRRVPSSYVTIGGHEVVVTRQVQPETMDVELPGFPMVAFDFLVNFAYEEL
PKRDVMLGVAFDNDPNKRGLLVKTVIPESNAARAGVKEWDLLLSLDGEPLTEAFDLIYAVKQKHVGDRGTLKLERNGAPL
SVEVEFKQSEPYQHGKQENAAPQKAP

Sequences:

>Translated_426_residues
MLSPSHLRHLVAAFSLFAMTGCCTTSGKQVIGNPEVPYPLPSAPKVGDIIHLPTGVLVTPEQMKKVATDARVVYVGETHD
NPASHRLELDMLKALEERYPGKAALGMEMFTRSQQPVLDRWSAGELDEKTFVKDSHWFDTWKMDFDYYRDLLLYAKEKRI
PIIGLNAEKSLVQAVQSKPLEDLSAEEKAQLPELDLSDPYQRAQTESIFAGHSHGKMAAEGFLRAQTLWDDTMAETAARF
LESPQGQDRHLLVAAGGNHVSYGFGIPRRVFRRVPSSYVTIGGHEVVVTRQVQPETMDVELPGFPMVAFDFLVNFAYEEL
PKRDVMLGVAFDNDPNKRGLLVKTVIPESNAARAGVKEWDLLLSLDGEPLTEAFDLIYAVKQKHVGDRGTLKLERNGAPL
SVEVEFKQSEPYQHGKQENAAPQKAP
>Mature_426_residues
MLSPSHLRHLVAAFSLFAMTGCCTTSGKQVIGNPEVPYPLPSAPKVGDIIHLPTGVLVTPEQMKKVATDARVVYVGETHD
NPASHRLELDMLKALEERYPGKAALGMEMFTRSQQPVLDRWSAGELDEKTFVKDSHWFDTWKMDFDYYRDLLLYAKEKRI
PIIGLNAEKSLVQAVQSKPLEDLSAEEKAQLPELDLSDPYQRAQTESIFAGHSHGKMAAEGFLRAQTLWDDTMAETAARF
LESPQGQDRHLLVAAGGNHVSYGFGIPRRVFRRVPSSYVTIGGHEVVVTRQVQPETMDVELPGFPMVAFDFLVNFAYEEL
PKRDVMLGVAFDNDPNKRGLLVKTVIPESNAARAGVKEWDLLLSLDGEPLTEAFDLIYAVKQKHVGDRGTLKLERNGAPL
SVEVEFKQSEPYQHGKQENAAPQKAP

Specific function: Serine Protease That Is Required At High Temperature. Involved In The Degradation Of Damaged Proteins. It Can Degrade Icia, Ada, Casein And Globin. Shared Specificity With Degq. [C]

COG id: COG3016

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 47480; Mature: 47480

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPSHLRHLVAAFSLFAMTGCCTTSGKQVIGNPEVPYPLPSAPKVGDIIHLPTGVLVTP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCEECH
EQMKKVATDARVVYVGETHDNPASHRLELDMLKALEERYPGKAALGMEMFTRSQQPVLDR
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHC
WSAGELDEKTFVKDSHWFDTWKMDFDYYRDLLLYAKEKRIPIIGLNAEKSLVQAVQSKPL
CCCCCCCCHHEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCC
EDLSAEEKAQLPELDLSDPYQRAQTESIFAGHSHGKMAAEGFLRAQTLWDDTMAETAARF
HHCCCHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LESPQGQDRHLLVAAGGNHVSYGFGIPRRVFRRVPSSYVTIGGHEVVVTRQVQPETMDVE
HHCCCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCEEEECCEEEEEEEECCCCEEEEE
LPGFPMVAFDFLVNFAYEELPKRDVMLGVAFDNDPNKRGLLVKTVIPESNAARAGVKEWD
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE
LLLSLDGEPLTEAFDLIYAVKQKHVGDRGTLKLERNGAPLSVEVEFKQSEPYQHGKQENA
EEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHCCCCCCC
APQKAP
CCCCCC
>Mature Secondary Structure
MLSPSHLRHLVAAFSLFAMTGCCTTSGKQVIGNPEVPYPLPSAPKVGDIIHLPTGVLVTP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCEECH
EQMKKVATDARVVYVGETHDNPASHRLELDMLKALEERYPGKAALGMEMFTRSQQPVLDR
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHC
WSAGELDEKTFVKDSHWFDTWKMDFDYYRDLLLYAKEKRIPIIGLNAEKSLVQAVQSKPL
CCCCCCCCHHEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCC
EDLSAEEKAQLPELDLSDPYQRAQTESIFAGHSHGKMAAEGFLRAQTLWDDTMAETAARF
HHCCCHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LESPQGQDRHLLVAAGGNHVSYGFGIPRRVFRRVPSSYVTIGGHEVVVTRQVQPETMDVE
HHCCCCCCCEEEEEECCCEEEECCCCHHHHHHHCCCCEEEECCEEEEEEEECCCCEEEEE
LPGFPMVAFDFLVNFAYEELPKRDVMLGVAFDNDPNKRGLLVKTVIPESNAARAGVKEWD
CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEE
LLLSLDGEPLTEAFDLIYAVKQKHVGDRGTLKLERNGAPLSVEVEFKQSEPYQHGKQENA
EEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCHHCCCCCCC
APQKAP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Serine endopeptidases [C]

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA