| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117307
Identifier: 197117307
GI number: 197117307
Start: 1078720
End: 1078992
Strand: Reverse
Name: 197117307
Synonym: Gbem_0917
Alternate gene names: NA
Gene position: 1078992-1078720 (Counterclockwise)
Preceding gene: 197117362
Following gene: 197117297
Centisome position: 23.38
GC content: 60.07
Gene sequence:
>273_bases ATGGACTTGTGTCTCGACAAAGGGGAGTTGCTGAGAGTAGAAGCCGGCACAGAAGGCTTGACGCTACGCTGCCTGAAGGG AACCATCTGGCTCACCGTGGGGAACGGCAGGGATTACCTGTTGCAACCCGGAGCGAGGTTCGAGGTGAAGCGAGAGATGT CTGCCATAGCCGAGGCTCTCGACCCGGTGGAGATGCGGCTGTATCCGGCCCTCTTCGATGGGGCCGCCATAGCACCCATC GCCAACCACATCCAGGTTCGTCTGGCCCTCTAA
Upstream 100 bases:
>100_bases CTGCAACTGTAACGGCGACATATCGCAAGCCCTGTGTCTGTACTCATCCCCCGCTCACCGCTATAGTTGATCCAGCTAAC GCCATAAGGGGGAACCGGAC
Downstream 100 bases:
>100_bases GCCTCGCTCTCCCCACTGGCGCCTAGAAGACAGCGGCGGGCCTTACGCCTACCCCTGGCGCACCGGCGCCTGCGCGAGGG GCCCGACCACCGTGGTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDLCLDKGELLRVEAGTEGLTLRCLKGTIWLTVGNGRDYLLQPGARFEVKREMSAIAEALDPVEMRLYPALFDGAAIAPI ANHIQVRLAL
Sequences:
>Translated_90_residues MDLCLDKGELLRVEAGTEGLTLRCLKGTIWLTVGNGRDYLLQPGARFEVKREMSAIAEALDPVEMRLYPALFDGAAIAPI ANHIQVRLAL >Mature_90_residues MDLCLDKGELLRVEAGTEGLTLRCLKGTIWLTVGNGRDYLLQPGARFEVKREMSAIAEALDPVEMRLYPALFDGAAIAPI ANHIQVRLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9881; Mature: 9881
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLCLDKGELLRVEAGTEGLTLRCLKGTIWLTVGNGRDYLLQPGARFEVKREMSAIAEAL CCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHC DPVEMRLYPALFDGAAIAPIANHIQVRLAL CCCCEEEEEECCCCCEECCCCCEEEEEEEC >Mature Secondary Structure MDLCLDKGELLRVEAGTEGLTLRCLKGTIWLTVGNGRDYLLQPGARFEVKREMSAIAEAL CCCCCCCCCEEEEECCCCCEEEEEECCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHC DPVEMRLYPALFDGAAIAPIANHIQVRLAL CCCCEEEEEECCCCCEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA